| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317808
Identifier: 158317808
GI number: 158317808
Start: 7384216
End: 7384671
Strand: Reverse
Name: 158317808
Synonym: Franean1_6066
Alternate gene names: NA
Gene position: 7384671-7384216 (Counterclockwise)
Preceding gene: 158317809
Following gene: 158317807
Centisome position: 82.22
GC content: 69.96
Gene sequence:
>456_bases GTGCCGCTGAACCAGGACTTTGTCGGACGTAGTTACACCTCCGACGTCCCGTTCCAGGTGGGACGTGAGCACATCCGCCA GTTCGCGCGCGCCATCGGCGACGGCAACCCGCTCTTCCGCGACGTGGAGGCGGCGAAGGCCGCCGGTCACGCCGATCTGG TCGCCCCGCCGACCTTCCTGGTCACGGCGATCCCGGGCGACCTCGGCCTGCCGACCAACGATCCCGCTCTCGGCCTGGAC TACTCCCTCGTCGTCCACGGTGACCAGCGGTTCACCCTGCACCGCCCGGTTGTCGCGGGCGACGAGCTCGTGGTGCGCTC GACGCTGGCGTCCATCCGCTCGGTCGGCCGCAACGAGGTGCTGGTGACGTCCTACGAGTTCACGACGACGAGTGGCGAGC TGGTCGCGGAGGGAACGTGCAGCCTGGTCTCCCGCGGCACCGCGCCGCCTCGTTGA
Upstream 100 bases:
>100_bases CTGTCCGCGCGGGCGCGGGCCCGATAGGGTCTCGAACCGGTCCGGTAAGCCCGGGTTCCGGCGACATCGGGATCCGGCAA CGTCGAGATCGGAGCGTGCG
Downstream 100 bases:
>100_bases CCATGGTCCCCGCTGCCCCGCTGCCCCGCTGCCCCGCCGCCTCGTTGACCACTTTCTCGCTGACCACCGCGACGTCGCCG CGCCGCCCCGCTGACGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MPLNQDFVGRSYTSDVPFQVGREHIRQFARAIGDGNPLFRDVEAAKAAGHADLVAPPTFLVTAIPGDLGLPTNDPALGLD YSLVVHGDQRFTLHRPVVAGDELVVRSTLASIRSVGRNEVLVTSYEFTTTSGELVAEGTCSLVSRGTAPPR
Sequences:
>Translated_151_residues MPLNQDFVGRSYTSDVPFQVGREHIRQFARAIGDGNPLFRDVEAAKAAGHADLVAPPTFLVTAIPGDLGLPTNDPALGLD YSLVVHGDQRFTLHRPVVAGDELVVRSTLASIRSVGRNEVLVTSYEFTTTSGELVAEGTCSLVSRGTAPPR >Mature_150_residues PLNQDFVGRSYTSDVPFQVGREHIRQFARAIGDGNPLFRDVEAAKAAGHADLVAPPTFLVTAIPGDLGLPTNDPALGLDY SLVVHGDQRFTLHRPVVAGDELVVRSTLASIRSVGRNEVLVTSYEFTTTSGELVAEGTCSLVSRGTAPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0336 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y6066_FRASN (A8LC73)
Other databases:
- EMBL: CP000820 - RefSeq: YP_001510316.1 - ProteinModelPortal: A8LC73 - GeneID: 5674387 - GenomeReviews: CP000820_GR - KEGG: fre:Franean1_6066 - HOGENOM: HBG659807 - OMA: PYEVGRE - ProtClustDB: CLSK947814 - BioCyc: FSP1855:FRANEAN1_6066-MONOMER - HAMAP: MF_00799 - InterPro: IPR002539 - InterPro: IPR016709 - PIRSF: PIRSF018072
Pfam domain/function: PF01575 MaoC_dehydratas
EC number: NA
Molecular weight: Translated: 16128; Mature: 15997
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLNQDFVGRSYTSDVPFQVGREHIRQFARAIGDGNPLFRDVEAAKAAGHADLVAPPTFL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEE VTAIPGDLGLPTNDPALGLDYSLVVHGDQRFTLHRPVVAGDELVVRSTLASIRSVGRNEV EEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCEECCCHHHHHHHHHHHHHCCCCCE LVTSYEFTTTSGELVAEGTCSLVSRGTAPPR EEEEEEEECCCCCEEECCCHHHHHCCCCCCC >Mature Secondary Structure PLNQDFVGRSYTSDVPFQVGREHIRQFARAIGDGNPLFRDVEAAKAAGHADLVAPPTFL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEE VTAIPGDLGLPTNDPALGLDYSLVVHGDQRFTLHRPVVAGDELVVRSTLASIRSVGRNEV EEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCEECCCHHHHHHHHHHHHHCCCCCE LVTSYEFTTTSGELVAEGTCSLVSRGTAPPR EEEEEEEECCCCCEEECCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA