| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317807
Identifier: 158317807
GI number: 158317807
Start: 7383658
End: 7384086
Strand: Reverse
Name: 158317807
Synonym: Franean1_6065
Alternate gene names: NA
Gene position: 7384086-7383658 (Counterclockwise)
Preceding gene: 158317808
Following gene: 158317805
Centisome position: 82.21
GC content: 69.46
Gene sequence:
>429_bases ATGCCCACCACCGTCACCTATGACGCCGTCGACGTCGGTACCGAGATCGGTGACCGGGTCTTCCCGCTGCGGCGAGCCGA TCTGGTGCGCTACGCCGGCGCGTCGGGCGATTTCAACCCGATCCACTGGAACGAGCGGGTGGCCGCCGAGGCCGGGCTCC CCGGTGTGCTCGCGCACGGCATGCTGACGATGGCCACGGCGGGCCGTCTCGTCACCGACTGGGTCGGCGACCCGGCGGCC GTCGTCGAGTACGGCGTGAAGTTCTCCTCACCCGTGGTCGTGCCCGACGACGACGAGGGCGCGCAGATCTCTGTGCGGGG CGTTGTGGAGAAAAAGCTCGACGGCGGGAGGGTCGTGGTTAACCTCACAGTCCGACACGAGGGTGCCAAGGTCCTCATGG CGGCGCGGGCGACCGTCCAGCTCGCCTGA
Upstream 100 bases:
>100_bases TGCCCCGCCGCCTCGTTGACCACTTTCTCGCTGACCACCGCGACGTCGCCGCGCCGCCCCGCTGACGCGGCGTCCCGCCG AGGGTTCGATCGGAGCCGGC
Downstream 100 bases:
>100_bases CCCCGGCGGCGCCCGGCAGCGTCCCGCGGGGCCCGGTCCCACACCCGGATACCGGCCGCGGCGCGGCCCCGGCCCCACAC GCCAGCGGGCCCCGCGGCGG
Product: dehydratase
Products: NA
Alternate protein names: Dehydratase; MaoC Domain-Containing Protein Dehydratase; MaoC-Like Dehydratase; Acyl Dehydratase; (3R)-Hydroxyacyl-ACP Dehydratase Subunit HadB; MaoC Family Protein; MaoC Like Domain-Containing Protein; Dehydrogenase; Maoc-Like Dehydratase; MaoC-Like Domain-Containing Protein; MaoC Domain-Containing Protein; R_hydratase_like -Hydratase
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPTTVTYDAVDVGTEIGDRVFPLRRADLVRYAGASGDFNPIHWNERVAAEAGLPGVLAHGMLTMATAGRLVTDWVGDPAA VVEYGVKFSSPVVVPDDDEGAQISVRGVVEKKLDGGRVVVNLTVRHEGAKVLMAARATVQLA
Sequences:
>Translated_142_residues MPTTVTYDAVDVGTEIGDRVFPLRRADLVRYAGASGDFNPIHWNERVAAEAGLPGVLAHGMLTMATAGRLVTDWVGDPAA VVEYGVKFSSPVVVPDDDEGAQISVRGVVEKKLDGGRVVVNLTVRHEGAKVLMAARATVQLA >Mature_141_residues PTTVTYDAVDVGTEIGDRVFPLRRADLVRYAGASGDFNPIHWNERVAAEAGLPGVLAHGMLTMATAGRLVTDWVGDPAAV VEYGVKFSSPVVVPDDDEGAQISVRGVVEKKLDGGRVVVNLTVRHEGAKVLMAARATVQLA
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15024; Mature: 14893
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTVTYDAVDVGTEIGDRVFPLRRADLVRYAGASGDFNPIHWNERVAAEAGLPGVLAHG CCCEEEECHHHCCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCHHHCCCCHHHHHH MLTMATAGRLVTDWVGDPAAVVEYGVKFSSPVVVPDDDEGAQISVRGVVEKKLDGGRVVV HHHHHHCCCEEECCCCCCHHHHHHCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEE NLTVRHEGAKVLMAARATVQLA EEEEECCCCEEEEEEEEEEEEC >Mature Secondary Structure PTTVTYDAVDVGTEIGDRVFPLRRADLVRYAGASGDFNPIHWNERVAAEAGLPGVLAHG CCEEEECHHHCCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCHHHCCCCHHHHHH MLTMATAGRLVTDWVGDPAAVVEYGVKFSSPVVVPDDDEGAQISVRGVVEKKLDGGRVVV HHHHHHCCCEEECCCCCCHHHHHHCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEE NLTVRHEGAKVLMAARATVQLA EEEEECCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA