| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is glmM
Identifier: 158317758
GI number: 158317758
Start: 7337814
End: 7339217
Strand: Reverse
Name: glmM
Synonym: Franean1_6016
Alternate gene names: 158317758
Gene position: 7339217-7337814 (Counterclockwise)
Preceding gene: 158317759
Following gene: 158317757
Centisome position: 81.71
GC content: 76.64
Gene sequence:
>1404_bases GTGGCGAGGCTTTTCGGCACCGACGGCGTCCGCGGTGTCGCGAACGCCGACCTGACGGCGGAGCTGGCGCTCGCGCTGGC GTCCGCCGCGGTGGAGGAGGTCGCGGACCGCGGCACGCCACCGCCCGGTCCGGTGGACGGCGTGCCCGTCGCGCGGTCCG CCCACGGCATCGACCACCGGCCGCTCGTCGTCGTGGGGCGGGACACCCGCCCGTCCGGTGAGTTCCTCGAAGCCGCGGTC GTCGCCGGTCTGGCCCGCGCGGGCGCGGACGTCACCCGGATCGGGGTCGTGCCGACCCCCGCCGTGTCCTACGTGGTCGC CGCGACCGGCGCCGACCTGGGCGTCATGCTCTCCGCGAGCCACAACCCGATGCCCGACAACGGGATCAAGCTCTTCGCCG CGGGCGGGCTGAAGCTGCCGGACGACGTCGAGGACGCCATCGAGCGCCGCATGGCCGGCCCGGCGGCACGCCGCCCGGTG GCGGCCGCGGTCGGGCGGGTCCGCGACGACAGCATGCTCGTCGACGGGTACGTCGACCACCTGCTCGCGACCCTGCCCGG CGGCCCCGGGGGCCTGCGCGGCCTGCGGGTCGTCGTGGACTGCGCCCAGGGCGCCGCCTCCGATCTCGCCCCGCGGGTCC TGCGCGCCGCCGGCGCCGATGTGATCGCGCTGCACGCCGACGGCGACGGGCTGCGCATCAACGACCGTTCCGGGGCGACC CACCTCGACAGCCTGCGCGACGCCGTCGTGGCGCACGGCGCCGACGCCGGCATCGCCCACGACGGCGACGCCGACCGGTG CCTGGCCGTGGACTCCGCCGGGGAGATCGTCGACGGTGACCAGATCCTCGCGCTGTGCGCGCTGGCGCTCGCCGAGCGCG GCGAGCTCGAGCGCGGCACCGTGGTCGTCACCGTGATGTCGAATCTCGGGTTCCACCACGCCATGCGCGACGCCGGCATC GACGTCGTCACCACCCCGGTCGGGGACCGCTACGTCCTGGAGGCCATGCGCTCCGGCGCCTACTCGCTCGGCGGCGAGCA GAGCGGGCACGTGGTCTTCCTCCGCCACGCCGGCACCGGCGACGGGCTGCTCACCGCCCTGCAGATCCTCGGCCGGATGG CGGAGACCAGCCAGCCGCTGCACGAGCTGGCGAAGGCGATGACCCGGCTGCCGCAGGTCCTGGTGAACGTCCGCGGTGTC GACCGGGCGCGGGCGGAGACCTCCGACGAGCTGCGCGCCGCGGTGGCCGACGCCGAGGCGGAGCTGGCCGGGGCCGGCCG GGTGCTGCTGCGGCCGTCCGGCACCGAGCCGCTGGTGCGCGTGATGGTCGAGGCACCGACGGACGAGCTCGCCCGGGACG TCGCCGGCCGGCTCGCCGACGTCGTGCAGCGCGCCCTGCGCTGA
Upstream 100 bases:
>100_bases GCGCGCGGTGGTTTCGTTCCATCCAGTGGTCTTGTTCCGATGTCCGCGCGGCGTGCCGGTGGCGCGTGGCGGTGCTGCTC CGATCCCTTGGGAGGCCTCA
Downstream 100 bases:
>100_bases CCAACGCGCCCTGCGCTGAACCCGCGTTCGCACCCGTCACCCGCGGGCCCGTTCCGCGGGCCCGATTTCCGCGGGCGGGG AGCGTCGGGCACGTGCCGGT
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MARLFGTDGVRGVANADLTAELALALASAAVEEVADRGTPPPGPVDGVPVARSAHGIDHRPLVVVGRDTRPSGEFLEAAV VAGLARAGADVTRIGVVPTPAVSYVVAATGADLGVMLSASHNPMPDNGIKLFAAGGLKLPDDVEDAIERRMAGPAARRPV AAAVGRVRDDSMLVDGYVDHLLATLPGGPGGLRGLRVVVDCAQGAASDLAPRVLRAAGADVIALHADGDGLRINDRSGAT HLDSLRDAVVAHGADAGIAHDGDADRCLAVDSAGEIVDGDQILALCALALAERGELERGTVVVTVMSNLGFHHAMRDAGI DVVTTPVGDRYVLEAMRSGAYSLGGEQSGHVVFLRHAGTGDGLLTALQILGRMAETSQPLHELAKAMTRLPQVLVNVRGV DRARAETSDELRAAVADAEAELAGAGRVLLRPSGTEPLVRVMVEAPTDELARDVAGRLADVVQRALR
Sequences:
>Translated_467_residues MARLFGTDGVRGVANADLTAELALALASAAVEEVADRGTPPPGPVDGVPVARSAHGIDHRPLVVVGRDTRPSGEFLEAAV VAGLARAGADVTRIGVVPTPAVSYVVAATGADLGVMLSASHNPMPDNGIKLFAAGGLKLPDDVEDAIERRMAGPAARRPV AAAVGRVRDDSMLVDGYVDHLLATLPGGPGGLRGLRVVVDCAQGAASDLAPRVLRAAGADVIALHADGDGLRINDRSGAT HLDSLRDAVVAHGADAGIAHDGDADRCLAVDSAGEIVDGDQILALCALALAERGELERGTVVVTVMSNLGFHHAMRDAGI DVVTTPVGDRYVLEAMRSGAYSLGGEQSGHVVFLRHAGTGDGLLTALQILGRMAETSQPLHELAKAMTRLPQVLVNVRGV DRARAETSDELRAAVADAEAELAGAGRVLLRPSGTEPLVRVMVEAPTDELARDVAGRLADVVQRALR >Mature_466_residues ARLFGTDGVRGVANADLTAELALALASAAVEEVADRGTPPPGPVDGVPVARSAHGIDHRPLVVVGRDTRPSGEFLEAAVV AGLARAGADVTRIGVVPTPAVSYVVAATGADLGVMLSASHNPMPDNGIKLFAAGGLKLPDDVEDAIERRMAGPAARRPVA AAVGRVRDDSMLVDGYVDHLLATLPGGPGGLRGLRVVVDCAQGAASDLAPRVLRAAGADVIALHADGDGLRINDRSGATH LDSLRDAVVAHGADAGIAHDGDADRCLAVDSAGEIVDGDQILALCALALAERGELERGTVVVTVMSNLGFHHAMRDAGID VVTTPVGDRYVLEAMRSGAYSLGGEQSGHVVFLRHAGTGDGLLTALQILGRMAETSQPLHELAKAMTRLPQVLVNVRGVD RARAETSDELRAAVADAEAELAGAGRVLLRPSGTEPLVRVMVEAPTDELARDVAGRLADVVQRALR
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=466, Percent_Identity=42.274678111588, Blast_Score=305, Evalue=4e-84, Organism=Escherichia coli, GI1788361, Length=427, Percent_Identity=31.1475409836066, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI1786904, Length=424, Percent_Identity=26.4150943396226, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_FRASN (A8LAZ9)
Other databases:
- EMBL: CP000820 - RefSeq: YP_001510266.1 - ProteinModelPortal: A8LAZ9 - SMR: A8LAZ9 - GeneID: 5674337 - GenomeReviews: CP000820_GR - KEGG: fre:Franean1_6016 - HOGENOM: HBG644964 - OMA: VHDRYIE - ProtClustDB: PRK14318 - BioCyc: FSP1855:FRANEAN1_6016-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 47986; Mature: 47855
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 120-120
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLFGTDGVRGVANADLTAELALALASAAVEEVADRGTPPPGPVDGVPVARSAHGIDHR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PLVVVGRDTRPSGEFLEAAVVAGLARAGADVTRIGVVPTPAVSYVVAATGADLGVMLSAS CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHEEEECCCCEEEEEECC HNPMPDNGIKLFAAGGLKLPDDVEDAIERRMAGPAARRPVAAAVGRVRDDSMLVDGYVDH CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHCCCHHHHHCCCCCCCEEHHHHHHH LLATLPGGPGGLRGLRVVVDCAQGAASDLAPRVLRAAGADVIALHADGDGLRINDRSGAT HHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCH HLDSLRDAVVAHGADAGIAHDGDADRCLAVDSAGEIVDGDQILALCALALAERGELERGT HHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEECCHHHHHHHHHHHHHCCCCCCCE VVVTVMSNLGFHHAMRDAGIDVVTTPVGDRYVLEAMRSGAYSLGGEQSGHVVFLRHAGTG EEEEEHHHCCHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC DGLLTALQILGRMAETSQPLHELAKAMTRLPQVLVNVRGVDRARAETSDELRAAVADAEA CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHH ELAGAGRVLLRPSGTEPLVRVMVEAPTDELARDVAGRLADVVQRALR HHCCCCEEEECCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARLFGTDGVRGVANADLTAELALALASAAVEEVADRGTPPPGPVDGVPVARSAHGIDHR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PLVVVGRDTRPSGEFLEAAVVAGLARAGADVTRIGVVPTPAVSYVVAATGADLGVMLSAS CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHEEEECCCCEEEEEECC HNPMPDNGIKLFAAGGLKLPDDVEDAIERRMAGPAARRPVAAAVGRVRDDSMLVDGYVDH CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHCCCHHHHHCCCCCCCEEHHHHHHH LLATLPGGPGGLRGLRVVVDCAQGAASDLAPRVLRAAGADVIALHADGDGLRINDRSGAT HHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCH HLDSLRDAVVAHGADAGIAHDGDADRCLAVDSAGEIVDGDQILALCALALAERGELERGT HHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEECCHHHHHHHHHHHHHCCCCCCCE VVVTVMSNLGFHHAMRDAGIDVVTTPVGDRYVLEAMRSGAYSLGGEQSGHVVFLRHAGTG EEEEEHHHCCHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC DGLLTALQILGRMAETSQPLHELAKAMTRLPQVLVNVRGVDRARAETSDELRAAVADAEA CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHH ELAGAGRVLLRPSGTEPLVRVMVEAPTDELARDVAGRLADVVQRALR HHCCCCEEEECCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA