| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yqjI [C]
Identifier: 158317756
GI number: 158317756
Start: 7334657
End: 7335634
Strand: Direct
Name: yqjI [C]
Synonym: Franean1_6014
Alternate gene names: 158317756
Gene position: 7334657-7335634 (Clockwise)
Preceding gene: 158317746
Following gene: 158317761
Centisome position: 81.66
GC content: 78.02
Gene sequence:
>978_bases ATGAGTTCACACGCCATGCCGGGATGGGATGCCCGCTGGGACACCTGGGGCCGGTACCTACCGTTCGACCCCACCCGGCT CCTGGATCCCGCCCGGCTTCTGGCACTCGCCGAGGCGGCCCGAGGCTCGTGCCGGCCGGGCGAGCACAGCCACGTGCACG GCGAGCACCGCGGCCATGCGCACGGCGAGCACCGCAGCCACATGCACGGTGACCACGGTCACGGTGACCACGGGCCCGGC GAACACGGTGGCGACCACGGCCCCGGCCCGCGCGGGCGCGGTGGGCGCGGTGGGCGGGGCAGCCGGCCGGGCGGGCCCTT CGGGCCGGGCGGGTTCGGGCCGGGCGGTTGGCCGTTCGGCCGCGGCTTCCCGCCGGGGCCCGGTTTCGGGCGCGGGGCAC GGGTCGCCCGCGGCGACGTCCGCGAGGCACTGCTCGCGTTGCTCGCCGAGGAGCCGATGCACGGCTACCAGATGATCGGC GAGCTGGCCTCCCGCAGCGGCGGGGTCTGGCGGCCGAGTCCCGGCTCCGTCTACCCCGTGCTGTCGCTGCTCGCCGACGA GGGGCTGGTCCGCGCCGAGGAGCGCGACGGGCGCCGCGTCTTCCACCTCACCGACGCGGGCCGCGCCCACGTGGAGGCCC GCGCCGGAACGGCCAAGCCGTGGGAGACCGCGGCGGCGAGCGCGGACGACGAGACAACCGCGCTGCGGACGCTGGCCTTC GGGGTCGGCGCGGCGGTCGTCCAGGTCGCGCAGGCCGGCGACGCCGACCAGATCGCCGCGGCCCGGGACCTCCTCACCGA GACCCGGCGCGGTCTGTACCGCATCCTCGCCGGCGACCTGACGGATTCACCGGCGGCCGGCCCGGCCGAGGACGGCGGCA CAGGCTCCGGGCCCGCCGGCACGGCCGGTGCCACCGATCCTGGCCCGGCCGGTGGCGGCGCGAGCGCACCCGGCGGACAG CCGAAGGACCTGGGCTGA
Upstream 100 bases:
>100_bases GTCTGCCCGCTAGGTGGAGAGGAAGGGTAGCCATCCGCTCCATCGCGATATATCGTGAACGTACGCGAAGCAACGCGATT CACTTGCTAAGGAGATCACA
Downstream 100 bases:
>100_bases CGCCAGACGGGGGCGTGCCGGCCACCACACCGGCGCGCCCCTCCGCCGCGGTGCCGAGGCGACGCACCTGACGACCCTCG GCCCAGGCCGCGCTGGTGCT
Product: PadR-like family transcriptional regulator
Products: NA
Alternate protein names: PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator-Like Protein; Transcriptional Regulator PadR Family; Padr Family Transcriptional Regulator; PadR-Like Transcriptional Regulatory Protein; PadR Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR-Like
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSSHAMPGWDARWDTWGRYLPFDPTRLLDPARLLALAEAARGSCRPGEHSHVHGEHRGHAHGEHRSHMHGDHGHGDHGPG EHGGDHGPGPRGRGGRGGRGSRPGGPFGPGGFGPGGWPFGRGFPPGPGFGRGARVARGDVREALLALLAEEPMHGYQMIG ELASRSGGVWRPSPGSVYPVLSLLADEGLVRAEERDGRRVFHLTDAGRAHVEARAGTAKPWETAAASADDETTALRTLAF GVGAAVVQVAQAGDADQIAAARDLLTETRRGLYRILAGDLTDSPAAGPAEDGGTGSGPAGTAGATDPGPAGGGASAPGGQ PKDLG
Sequences:
>Translated_325_residues MSSHAMPGWDARWDTWGRYLPFDPTRLLDPARLLALAEAARGSCRPGEHSHVHGEHRGHAHGEHRSHMHGDHGHGDHGPG EHGGDHGPGPRGRGGRGGRGSRPGGPFGPGGFGPGGWPFGRGFPPGPGFGRGARVARGDVREALLALLAEEPMHGYQMIG ELASRSGGVWRPSPGSVYPVLSLLADEGLVRAEERDGRRVFHLTDAGRAHVEARAGTAKPWETAAASADDETTALRTLAF GVGAAVVQVAQAGDADQIAAARDLLTETRRGLYRILAGDLTDSPAAGPAEDGGTGSGPAGTAGATDPGPAGGGASAPGGQ PKDLG >Mature_324_residues SSHAMPGWDARWDTWGRYLPFDPTRLLDPARLLALAEAARGSCRPGEHSHVHGEHRGHAHGEHRSHMHGDHGHGDHGPGE HGGDHGPGPRGRGGRGGRGSRPGGPFGPGGFGPGGWPFGRGFPPGPGFGRGARVARGDVREALLALLAEEPMHGYQMIGE LASRSGGVWRPSPGSVYPVLSLLADEGLVRAEERDGRRVFHLTDAGRAHVEARAGTAKPWETAAASADDETTALRTLAFG VGAAVVQVAQAGDADQIAAARDLLTETRRGLYRILAGDLTDSPAAGPAEDGGTGSGPAGTAGATDPGPAGGGASAPGGQP KDLG
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33236; Mature: 33105
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHAMPGWDARWDTWGRYLPFDPTRLLDPARLLALAEAARGSCRPGEHSHVHGEHRGHA CCCCCCCCCCCCHHCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC HGEHRSHMHGDHGHGDHGPGEHGGDHGPGPRGRGGRGGRGSRPGGPFGPGGFGPGGWPFG CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGFPPGPGFGRGARVARGDVREALLALLAEEPMHGYQMIGELASRSGGVWRPSPGSVYPV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH LSLLADEGLVRAEERDGRRVFHLTDAGRAHVEARAGTAKPWETAAASADDETTALRTLAF HHHHHHCCCEECCCCCCCEEEEECCCCCCEEHHCCCCCCCHHHHHCCCCCHHHHHHHHHH GVGAAVVQVAQAGDADQIAAARDLLTETRRGLYRILAGDLTDSPAAGPAEDGGTGSGPAG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC TAGATDPGPAGGGASAPGGQPKDLG CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSHAMPGWDARWDTWGRYLPFDPTRLLDPARLLALAEAARGSCRPGEHSHVHGEHRGHA CCCCCCCCCCCHHCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC HGEHRSHMHGDHGHGDHGPGEHGGDHGPGPRGRGGRGGRGSRPGGPFGPGGFGPGGWPFG CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGFPPGPGFGRGARVARGDVREALLALLAEEPMHGYQMIGELASRSGGVWRPSPGSVYPV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH LSLLADEGLVRAEERDGRRVFHLTDAGRAHVEARAGTAKPWETAAASADDETTALRTLAF HHHHHHCCCEECCCCCCCEEEEECCCCCCEEHHCCCCCCCHHHHHCCCCCHHHHHHHHHH GVGAAVVQVAQAGDADQIAAARDLLTETRRGLYRILAGDLTDSPAAGPAEDGGTGSGPAG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC TAGATDPGPAGGGASAPGGQPKDLG CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA