| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317745
Identifier: 158317745
GI number: 158317745
Start: 7322252
End: 7322986
Strand: Reverse
Name: 158317745
Synonym: Franean1_6003
Alternate gene names: NA
Gene position: 7322986-7322252 (Counterclockwise)
Preceding gene: 158317747
Following gene: 158317744
Centisome position: 81.53
GC content: 75.24
Gene sequence:
>735_bases GTGGAGCGGTCCTCGGGCGCGTCGCCGATGCCGGCCTCCGTCGTGCTCCGGCCCGCCTCCCCGGCGGCGGAGCGACAGGA TGAGCCGTCGGTCGCCGCTGGCCCGTCTGCCGCCGACTGTCCGTCCGTCGCCGCCGACGCGGAGCTCGAGCTGCCCGACG AGGTCCGCGACGACCTGCGCTGGATCGTCGGCCAGATCCAGCACGGGTACCTGGCCGCGTCCGCGAGCGCCGTCGGTGGC CTGCCCGGTGGTCTCAAGGGTTTCTACGTGCTGGACGCCGCGGTCGGAGGAACGGCGCACAACCAGATCGAGGTCGCCCG CCGTTTCTCCATCGACCGGACCGTGATGGTCCGGCTGGTCGACGAGATGGAGCGCGCCGGCCTGGTCGAGCGCCGGCCGG ACCCGGCGGACCGCCGGGCACGAATGATCATCGCCACCGAGCGGGGAATCCAGGAGCACGAGCGGGTGCGGCGGCAGCTG CGCGCCGTCGACGACCACGTCCTGGCGCCGCTGGCGCCCGCGGACCGGGAGGTCTTCACCGGGCTGGCGCGGCTCGTCGC GGCACACCTGGTCGCGATGGATCCGACCAGGGGTGCCGCCGCGTGCGCCACGGCCGAGGTCACGCTGCAGAGTGCCACCA CCGGTTGTGGCGGCCCCGGTGCCTGCGCGGGTGTCGCCGGCGCCACCGACATCACCGGCGGGCCCGGTGCTGGCCGCGCC GAGCCGAGCTGCTGA
Upstream 100 bases:
>100_bases GATTTTGGTGTGCGAACAGATAGTCGTTCCAAGCAATAATCTTTGTCAACACCTATCTGTTCCGCAGATTAGTTCATGAT GATCGGGGTACGGTGTTCGG
Downstream 100 bases:
>100_bases CCGGGCGGGTCGGGCCGCGATGACGGTCACGTGGATGTGGGAGGCGAAGGCGGCCCCCGGTCAGGCCGCGGAGCTGGAGC GATGGGCCCGAGCGGCGGTG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MERSSGASPMPASVVLRPASPAAERQDEPSVAAGPSAADCPSVAADAELELPDEVRDDLRWIVGQIQHGYLAASASAVGG LPGGLKGFYVLDAAVGGTAHNQIEVARRFSIDRTVMVRLVDEMERAGLVERRPDPADRRARMIIATERGIQEHERVRRQL RAVDDHVLAPLAPADREVFTGLARLVAAHLVAMDPTRGAAACATAEVTLQSATTGCGGPGACAGVAGATDITGGPGAGRA EPSC
Sequences:
>Translated_244_residues MERSSGASPMPASVVLRPASPAAERQDEPSVAAGPSAADCPSVAADAELELPDEVRDDLRWIVGQIQHGYLAASASAVGG LPGGLKGFYVLDAAVGGTAHNQIEVARRFSIDRTVMVRLVDEMERAGLVERRPDPADRRARMIIATERGIQEHERVRRQL RAVDDHVLAPLAPADREVFTGLARLVAAHLVAMDPTRGAAACATAEVTLQSATTGCGGPGACAGVAGATDITGGPGAGRA EPSC >Mature_244_residues MERSSGASPMPASVVLRPASPAAERQDEPSVAAGPSAADCPSVAADAELELPDEVRDDLRWIVGQIQHGYLAASASAVGG LPGGLKGFYVLDAAVGGTAHNQIEVARRFSIDRTVMVRLVDEMERAGLVERRPDPADRRARMIIATERGIQEHERVRRQL RAVDDHVLAPLAPADREVFTGLARLVAAHLVAMDPTRGAAACATAEVTLQSATTGCGGPGACAGVAGATDITGGPGAGRA EPSC
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25215; Mature: 25215
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERSSGASPMPASVVLRPASPAAERQDEPSVAAGPSAADCPSVAADAELELPDEVRDDLR CCCCCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH WIVGQIQHGYLAASASAVGGLPGGLKGFYVLDAAVGGTAHNQIEVARRFSIDRTVMVRLV HHHHHHHCCHHEECCHHHCCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHCCHHHHHHHHH DEMERAGLVERRPDPADRRARMIIATERGIQEHERVRRQLRAVDDHVLAPLAPADREVFT HHHHHCCCCCCCCCCHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GLARLVAAHLVAMDPTRGAAACATAEVTLQSATTGCGGPGACAGVAGATDITGGPGAGRA HHHHHHHHHHHHCCCCCCCHHHHHHHEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCC EPSC CCCC >Mature Secondary Structure MERSSGASPMPASVVLRPASPAAERQDEPSVAAGPSAADCPSVAADAELELPDEVRDDLR CCCCCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH WIVGQIQHGYLAASASAVGGLPGGLKGFYVLDAAVGGTAHNQIEVARRFSIDRTVMVRLV HHHHHHHCCHHEECCHHHCCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHCCHHHHHHHHH DEMERAGLVERRPDPADRRARMIIATERGIQEHERVRRQLRAVDDHVLAPLAPADREVFT HHHHHCCCCCCCCCCHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GLARLVAAHLVAMDPTRGAAACATAEVTLQSATTGCGGPGACAGVAGATDITGGPGAGRA HHHHHHHHHHHHCCCCCCCHHHHHHHEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCC EPSC CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA