Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is groES [H]

Identifier: 158317744

GI number: 158317744

Start: 7321506

End: 7321811

Strand: Reverse

Name: groES [H]

Synonym: Franean1_6002

Alternate gene names: 158317744

Gene position: 7321811-7321506 (Counterclockwise)

Preceding gene: 158317745

Following gene: 158317743

Centisome position: 81.52

GC content: 67.32

Gene sequence:

>306_bases
GTGACGACCGCCACCAAGGTTGCAATCAAGCCGCTCGAGGACCGGATCGTCGTCCAGCCCTCGGACGCCGAGACGACCAC
CGCGTCAGGCATCGTGATCCCGGACACCGCCAAGGAGAAGCCCCAGGAGGGCACCGTCCTTGCCGTCGGCCCGGGTCGGT
TCGAGGACGGCAAGCGCGTCCCGCTCGACGTCAAGGTCGGCGACGTGGTGCTCTACAGCAAGTACGGCGGCACCGAGGTC
AAGTACGCCGGCGAGGAGTACCTGGTGCTCTCCGCCCGGGACGTCCTCGCGATCATCGAGAAGTAG

Upstream 100 bases:

>100_bases
ACTCGGCACTTGAGAGTGCCAGCGACAGGCGCCTGTTCACCCGCGACGGCAGGCCGCCAGGGTCGCTCTCTCATCCAGCG
AAGGAAGGGGGAGGTCGATC

Downstream 100 bases:

>100_bases
ACCGGACGCCGGTAGCAGCAGGCAGGGCGTGTCCCACCGGTGGTCCCCTGGTTTCCGCCGGGGGGCCGCGGTGGGGCGCG
CCCTTCTTGTTCCCGCCGGC

Product: co-chaperonin GroES

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTTATKVAIKPLEDRIVVQPSDAETTTASGIVIPDTAKEKPQEGTVLAVGPGRFEDGKRVPLDVKVGDVVLYSKYGGTEV
KYAGEEYLVLSARDVLAIIEK

Sequences:

>Translated_101_residues
MTTATKVAIKPLEDRIVVQPSDAETTTASGIVIPDTAKEKPQEGTVLAVGPGRFEDGKRVPLDVKVGDVVLYSKYGGTEV
KYAGEEYLVLSARDVLAIIEK
>Mature_100_residues
TTATKVAIKPLEDRIVVQPSDAETTTASGIVIPDTAKEKPQEGTVLAVGPGRFEDGKRVPLDVKVGDVVLYSKYGGTEVK
YAGEEYLVLSARDVLAIIEK

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

Organism=Escherichia coli, GI1790585, Length=94, Percent_Identity=47.8723404255319, Blast_Score=84, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17555568, Length=93, Percent_Identity=41.9354838709677, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324594, Length=107, Percent_Identity=42.9906542056075, Blast_Score=65, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356029, Length=104, Percent_Identity=44.2307692307692, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21358317, Length=103, Percent_Identity=41.747572815534, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 10804; Mature: 10673

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTATKVAIKPLEDRIVVQPSDAETTTASGIVIPDTAKEKPQEGTVLAVGPGRFEDGKRV
CCCCCEEEEEECCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCC
PLDVKVGDVVLYSKYGGTEVKYAGEEYLVLSARDVLAIIEK
EEEEEECCEEEEECCCCCEEEECCCEEEEEECCCEEEEECC
>Mature Secondary Structure 
TTATKVAIKPLEDRIVVQPSDAETTTASGIVIPDTAKEKPQEGTVLAVGPGRFEDGKRV
CCCCEEEEEECCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCC
PLDVKVGDVVLYSKYGGTEVKYAGEEYLVLSARDVLAIIEK
EEEEEECCEEEEECCCCCEEEECCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1682304 [H]