Click here to switch to the map view.

The map label for this gene is 158317742

Identifier: 158317742

GI number: 158317742

Start: 7318958

End: 7319290

Strand: Direct

Name: 158317742

Synonym: Franean1_6000

Alternate gene names: NA

Gene position: 7318958-7319290 (Clockwise)

Preceding gene: 158317741

Following gene: 158317746

Centisome position: 81.48

GC content: 75.08

Gene sequence:

>333_bases
ATGACCGACGTCCGACGACTTCCAGGCCCCGGCGCGGAGAAGTGGGAGTGGCAGCTCCACGGCGCCTGTCGAGGTGAGAG
CACCGAGCTGTTCTTCCATCCCGAGGGCGAACGCGGCCCGGCCAGAGCCGCGCGGGAGGCGGCGGCGAAGGCGATCTGCG
CACGCTGCCCGGTAATCCGGGCGTGTGGGGAACATGCCCTCGCCGCCCGGGAACCGTACGGCGTGTGGGGCGGAATGAGC
GAGTCCGAGCGGGAGGCGGTCCTCACCGGGCGCACCCGCAGGGGCGCCGCCCGTCACGCGCCCGCCCGGCCGGGGCTCGC
CCCGGCCTGCTGA

Upstream 100 bases:

>100_bases
GACCGGGTGAAATTTCAAGATCTCCAGTCGATGGCGAGCGGCTACGGTGACCGGGTAGTCGCGGCGCCAGCCGCTCAGGT
CGAAAGGGGGGGTCAGGCCG

Downstream 100 bases:

>100_bases
AACCAGCCGCCGGATGCGAAGATCCCCCGGCCCGTACCCCCGCTCCGGGACGTACGGGCCCGGGGATCTTTTCTTTTGCC
CGGAGTATGCGCGCCGCCGG

Product: transcription factor WhiB

Products: NA

Alternate protein names: WhiB Family Transcriptional Regulator; WhiB Family Regulatory Protein; Transcriptional Regulator; Regulatory Protein; Whib Family Transcriptional Regulator; Transcriptional Regulator WhiB; Transcriptional Regulator WhiD; WhiB Protein; Whib-Like Transcriptional Regulator; WhiB-Family Transcriptional Regulator; WhiB Transcriptional Regulator

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTDVRRLPGPGAEKWEWQLHGACRGESTELFFHPEGERGPARAAREAAAKAICARCPVIRACGEHALAAREPYGVWGGMS
ESEREAVLTGRTRRGAARHAPARPGLAPAC

Sequences:

>Translated_110_residues
MTDVRRLPGPGAEKWEWQLHGACRGESTELFFHPEGERGPARAAREAAAKAICARCPVIRACGEHALAAREPYGVWGGMS
ESEREAVLTGRTRRGAARHAPARPGLAPAC
>Mature_109_residues
TDVRRLPGPGAEKWEWQLHGACRGESTELFFHPEGERGPARAAREAAAKAICARCPVIRACGEHALAAREPYGVWGGMSE
SEREAVLTGRTRRGAARHAPARPGLAPAC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11829; Mature: 11697

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVRRLPGPGAEKWEWQLHGACRGESTELFFHPEGERGPARAAREAAAKAICARCPVIR
CCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCHHHH
ACGEHALAAREPYGVWGGMSESEREAVLTGRTRRGAARHAPARPGLAPAC
HCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDVRRLPGPGAEKWEWQLHGACRGESTELFFHPEGERGPARAAREAAAKAICARCPVIR
CCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCHHHH
ACGEHALAAREPYGVWGGMSESEREAVLTGRTRRGAARHAPARPGLAPAC
HCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA