| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317741
Identifier: 158317741
GI number: 158317741
Start: 7317858
End: 7318430
Strand: Direct
Name: 158317741
Synonym: Franean1_5999
Alternate gene names: NA
Gene position: 7317858-7318430 (Clockwise)
Preceding gene: 158317735
Following gene: 158317742
Centisome position: 81.47
GC content: 68.76
Gene sequence:
>573_bases ATGCGCGCGGCCCGTCACTGCCACACCAGACGAGCTGCCCCGGCACGAAGGGAAGCCATCCAGGCTGGGACAGATTGGGG CATGCTGGAGCGAAAGCCCCGCACGTCAGTGCCGGACTCCGTATCGGGACCACTAAGCTTGGGCTGCGAGCGTAGCGTGT TCCTCGTGAGCAACGAGCCCCTCGACCCCTTCGCGGGCGACCCCGAGGACCCGGCGGCCGAGCTCGCGCAGCTCGACTCC GCCGAGGATCTGGAACTACTCGAACCGCTGTCCCTACGCGAGCGGGAAGAGATCCTCGCCGAGCTGGGCGACCTCGACGT CTTCCGGACCCTGCTCGAACCACGTGGTTACCGGGGTCTCGTCGTCGACTGCGAGGGGTGCGCCGAGCCGCACTACTTCG ACTGGGACCTGCTGGCCGGCAACCTACGGCACCTCCTAGACGAGGGCCGTACACGGGTGCACGAGCCTGCCTTCGCCCCG GATCCGGCGTGCTACGTGAGCTGGGAGTACGCCCGCGGCTTCGCTGACGGGGTGTACGAGGCCTCAGCCGCCTCCGAGGC GGACACCCGCTGA
Upstream 100 bases:
>100_bases CAAAGGTGCAAAACGGACCAGCTGCTACCACGAGGGCCGGCGTCGCGGATCCGGAATCGCATAAATGGGTCACAGACAAC CGGCGCGCGGAGCACGGACC
Downstream 100 bases:
>100_bases CCGACCGGCTCTCACCAGCCGTTACAACCCGGCCCGGCCGACACGGGCCGGGCACCCCTGCCCGCCCGCGGCTCCGGCGA CCGACGCCGGGGCCGGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MRAARHCHTRRAAPARREAIQAGTDWGMLERKPRTSVPDSVSGPLSLGCERSVFLVSNEPLDPFAGDPEDPAAELAQLDS AEDLELLEPLSLREREEILAELGDLDVFRTLLEPRGYRGLVVDCEGCAEPHYFDWDLLAGNLRHLLDEGRTRVHEPAFAP DPACYVSWEYARGFADGVYEASAASEADTR
Sequences:
>Translated_190_residues MRAARHCHTRRAAPARREAIQAGTDWGMLERKPRTSVPDSVSGPLSLGCERSVFLVSNEPLDPFAGDPEDPAAELAQLDS AEDLELLEPLSLREREEILAELGDLDVFRTLLEPRGYRGLVVDCEGCAEPHYFDWDLLAGNLRHLLDEGRTRVHEPAFAP DPACYVSWEYARGFADGVYEASAASEADTR >Mature_190_residues MRAARHCHTRRAAPARREAIQAGTDWGMLERKPRTSVPDSVSGPLSLGCERSVFLVSNEPLDPFAGDPEDPAAELAQLDS AEDLELLEPLSLREREEILAELGDLDVFRTLLEPRGYRGLVVDCEGCAEPHYFDWDLLAGNLRHLLDEGRTRVHEPAFAP DPACYVSWEYARGFADGVYEASAASEADTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3412 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21065; Mature: 21065
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAARHCHTRRAAPARREAIQAGTDWGMLERKPRTSVPDSVSGPLSLGCERSVFLVSNEP CCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC LDPFAGDPEDPAAELAQLDSAEDLELLEPLSLREREEILAELGDLDVFRTLLEPRGYRGL CCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCEE VVDCEGCAEPHYFDWDLLAGNLRHLLDEGRTRVHEPAFAPDPACYVSWEYARGFADGVYE EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHH ASAASEADTR HHCCCCCCCC >Mature Secondary Structure MRAARHCHTRRAAPARREAIQAGTDWGMLERKPRTSVPDSVSGPLSLGCERSVFLVSNEP CCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC LDPFAGDPEDPAAELAQLDSAEDLELLEPLSLREREEILAELGDLDVFRTLLEPRGYRGL CCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCEE VVDCEGCAEPHYFDWDLLAGNLRHLLDEGRTRVHEPAFAPDPACYVSWEYARGFADGVYE EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHH ASAASEADTR HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]