| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317735
Identifier: 158317735
GI number: 158317735
Start: 7306917
End: 7307513
Strand: Direct
Name: 158317735
Synonym: Franean1_5993
Alternate gene names: NA
Gene position: 7306917-7307513 (Clockwise)
Preceding gene: 158317734
Following gene: 158317741
Centisome position: 81.35
GC content: 67.17
Gene sequence:
>597_bases GTGGCCTTCGAAAGCTCTGACCACAGACGGGTCAACTCCGCCGTCGCCACGACCTCGGTGAAGATCGTGGTGGCGGGCGG ATTCGGCGCCGGCAAGACGACGTTCGTGGGCTCCGTGTCCGAGATCGTCCCGCTGCGCACCGAGGCCGTCATGACCGAGG CCGGCGCGCACGTCGACGACCTCACCCACCTCGTGGACAAGACCACCACGACGGTTGCCATGGACTTCGGCCGCGTCTCG CTGGACGAGGACCTGATCCTGTACCTGTTCGGCACGCCCGGGCAGTACCGGTTCTGGTTCATGTGGGACGACATCGTGCG CGGTGCCATCGGCGCGATCGTCCTGGCGGACACCAGACGGCTGGCGGACTGCTTCGCGGCGGTCGACTACTTCGAGCAGC GTCAGCTGCCGTTCGTCGTCGGCGTGAACTGCTTCGACGGGATCCTGCGCCACTCGATCGAGGATGTCCGCGAGGCCCTG CAGATCAACCAGGCTGTCCCGATCATCACCTGCGACGCCCGTAACCGCGACTCCACGAAGAGCGCGCTGATCGCCGTCGT CGAGCACACGATGTCCCGCGCGGCGGCGCGGACCTGA
Upstream 100 bases:
>100_bases GTCCTGGTAGGCGACATGGCGGACGAAGGCTTCGTCCGTGTCCACCAGCAGCCGGACCGCGATGAGGCACCGGATCTCGC GTTGCTCGAAAGGGTTCTCA
Downstream 100 bases:
>100_bases GGCATCGCCGTTCCGGGATCTCCCGGTCGGAAAGGCGTGGGGGGTGCTCCGAAACCGGAGCACCCCCCACGCCTTTGGCT TTTCCGGACTGTCCGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MAFESSDHRRVNSAVATTSVKIVVAGGFGAGKTTFVGSVSEIVPLRTEAVMTEAGAHVDDLTHLVDKTTTTVAMDFGRVS LDEDLILYLFGTPGQYRFWFMWDDIVRGAIGAIVLADTRRLADCFAAVDYFEQRQLPFVVGVNCFDGILRHSIEDVREAL QINQAVPIITCDARNRDSTKSALIAVVEHTMSRAAART
Sequences:
>Translated_198_residues MAFESSDHRRVNSAVATTSVKIVVAGGFGAGKTTFVGSVSEIVPLRTEAVMTEAGAHVDDLTHLVDKTTTTVAMDFGRVS LDEDLILYLFGTPGQYRFWFMWDDIVRGAIGAIVLADTRRLADCFAAVDYFEQRQLPFVVGVNCFDGILRHSIEDVREAL QINQAVPIITCDARNRDSTKSALIAVVEHTMSRAAART >Mature_197_residues AFESSDHRRVNSAVATTSVKIVVAGGFGAGKTTFVGSVSEIVPLRTEAVMTEAGAHVDDLTHLVDKTTTTVAMDFGRVSL DEDLILYLFGTPGQYRFWFMWDDIVRGAIGAIVLADTRRLADCFAAVDYFEQRQLPFVVGVNCFDGILRHSIEDVREALQ INQAVPIITCDARNRDSTKSALIAVVEHTMSRAAART
Specific function: Unknown
COG id: COG2229
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21657; Mature: 21526
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFESSDHRRVNSAVATTSVKIVVAGGFGAGKTTFVGSVSEIVPLRTEAVMTEAGAHVDD CCCCCCCCHHHHHHHEEEEEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHH LTHLVDKTTTTVAMDFGRVSLDEDLILYLFGTPGQYRFWFMWDDIVRGAIGAIVLADTRR HHHHHHCCHHEEEEECCCEECCCCEEEEEECCCCCEEEEEEEHHHHHHHHHEEEEECHHH LADCFAAVDYFEQRQLPFVVGVNCFDGILRHSIEDVREALQINQAVPIITCDARNRDSTK HHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH SALIAVVEHTMSRAAART HHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFESSDHRRVNSAVATTSVKIVVAGGFGAGKTTFVGSVSEIVPLRTEAVMTEAGAHVDD CCCCCCCHHHHHHHEEEEEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHH LTHLVDKTTTTVAMDFGRVSLDEDLILYLFGTPGQYRFWFMWDDIVRGAIGAIVLADTRR HHHHHHCCHHEEEEECCCEECCCCEEEEEECCCCCEEEEEEEHHHHHHHHHEEEEECHHH LADCFAAVDYFEQRQLPFVVGVNCFDGILRHSIEDVREALQINQAVPIITCDARNRDSTK HHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH SALIAVVEHTMSRAAART HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA