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The map label for this gene is 158317709

Identifier: 158317709

GI number: 158317709

Start: 7270951

End: 7271481

Strand: Reverse

Name: 158317709

Synonym: Franean1_5967

Alternate gene names: NA

Gene position: 7271481-7270951 (Counterclockwise)

Preceding gene: 158317710

Following gene: 158317708

Centisome position: 80.96

GC content: 66.29

Gene sequence:

>531_bases
GTGCGGTCCATAGGCGTGGCGATCGGTGTTCCGGAACCTTTCCGGACCGAGCTCCAGGACTGGCGGGAACGGCTCGGTGA
TCCGAATGCGGCCCTCATAGTGCCGCATGTCACGCTGCTCGGCCCGACCGAAGTGCCCGCCTCCCAGCTCCCCGCCGTCG
AGCGTCACCTGACGGAGGTCGCCGGAGGCGCCGAGCCGTTCGTGATCCATCTGCGTGGTTCCGGCACCTTCCGGCCGCTG
TCCGCGGTGGTGTTCGTGACCCTCGCCATGGGAATCTCCTGCTGCGAACTTCTGGAGAAGGCCGTCCGGTCTGGTCCGTT
GGACCGTCCCGTGCGCTTCTCGTACCACCCGCATGTCACGGTCGCGCACGATGTCGACGAGGAGTCGCTGGACCGTGCCT
TTGAGTTGCTGGCCGAATATCGGGCGCAGTTCGAGGTGACAGGTTTCGGGCTCTACGAACGCGGCGATGACTGCGCCTGG
CGTCAGTTGCGTCATTTTCCCTTCGCGGGCGGGGGTGGCAGACCGAGGTGA

Upstream 100 bases:

>100_bases
TGGGCCATGATGGCGCCATGGTTGGTCGGCAGAGCTCGTCCCGCGACCGCTGGTCGGCCCTTCCGTGGCCCGGCCGGATC
CGCGTGACGTGAAGGACTCC

Downstream 100 bases:

>100_bases
CAGGACCACGGGAAGCGGTGAAGACGGGCGTGGGAACGGTGAGCGGCGCCGCGGGCGCGGTGCGGCGCCGTCGCCCGTTC
ATTGACCACACGGTGCGTGC

Product: phosphoesterase HXTX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MRSIGVAIGVPEPFRTELQDWRERLGDPNAALIVPHVTLLGPTEVPASQLPAVERHLTEVAGGAEPFVIHLRGSGTFRPL
SAVVFVTLAMGISCCELLEKAVRSGPLDRPVRFSYHPHVTVAHDVDEESLDRAFELLAEYRAQFEVTGFGLYERGDDCAW
RQLRHFPFAGGGGRPR

Sequences:

>Translated_176_residues
MRSIGVAIGVPEPFRTELQDWRERLGDPNAALIVPHVTLLGPTEVPASQLPAVERHLTEVAGGAEPFVIHLRGSGTFRPL
SAVVFVTLAMGISCCELLEKAVRSGPLDRPVRFSYHPHVTVAHDVDEESLDRAFELLAEYRAQFEVTGFGLYERGDDCAW
RQLRHFPFAGGGGRPR
>Mature_176_residues
MRSIGVAIGVPEPFRTELQDWRERLGDPNAALIVPHVTLLGPTEVPASQLPAVERHLTEVAGGAEPFVIHLRGSGTFRPL
SAVVFVTLAMGISCCELLEKAVRSGPLDRPVRFSYHPHVTVAHDVDEESLDRAFELLAEYRAQFEVTGFGLYERGDDCAW
RQLRHFPFAGGGGRPR

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0477 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014051
- InterPro:   IPR009097
- InterPro:   IPR022932 [H]

Pfam domain/function: PF02834 2_5_RNA_ligase [H]

EC number: NA

Molecular weight: Translated: 19411; Mature: 19411

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIGVAIGVPEPFRTELQDWRERLGDPNAALIVPHVTLLGPTEVPASQLPAVERHLTEV
CCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEECEEEEECCCCCCHHHCCHHHHHHHHH
AGGAEPFVIHLRGSGTFRPLSAVVFVTLAMGISCCELLEKAVRSGPLDRPVRFSYHPHVT
HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEE
VAHDVDEESLDRAFELLAEYRAQFEVTGFGLYERGDDCAWRQLRHFPFAGGGGRPR
EEECCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRSIGVAIGVPEPFRTELQDWRERLGDPNAALIVPHVTLLGPTEVPASQLPAVERHLTEV
CCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEECEEEEECCCCCCHHHCCHHHHHHHHH
AGGAEPFVIHLRGSGTFRPLSAVVFVTLAMGISCCELLEKAVRSGPLDRPVRFSYHPHVT
HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEE
VAHDVDEESLDRAFELLAEYRAQFEVTGFGLYERGDDCAWRQLRHFPFAGGGGRPR
EEECCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]