| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yfeW [C]
Identifier: 158317710
GI number: 158317710
Start: 7271729
End: 7272607
Strand: Reverse
Name: yfeW [C]
Synonym: Franean1_5968
Alternate gene names: 158317710
Gene position: 7272607-7271729 (Counterclockwise)
Preceding gene: 158317712
Following gene: 158317709
Centisome position: 80.97
GC content: 71.56
Gene sequence:
>879_bases ATGGATGCGCTCAGGGAGCTGGACACGTGGCCCGTGCGGACGGCCGCGGCCGTCGTGCTGCGGTCGCCGGGCACGGGCGG TGCCGGTGGTGCGGCCGGTGCCGGTGGCCCCCGTGCCGTGGCCACCCAGGTCGGTGTGGCAGGCGATCCGGCGGTCCGGT TCCGGCTCGCGTCGGTCTCCAAGCTGATGAGCGCCTACGCGGTGCTCGTCGCGATCGAGGAGGGTGCCCTGGCGCTGGAC GAGCCGGCCGGCCCGGAGTCGTCGACGGTGGCGCATCTGCTCGCGCACGCCTCCGGTCTCGCGTTCTCGGGCGATCGGGT GATGGCCCGCCCGGGCACCCGCCGCATCTACTCGAACACCGGTTTCGAGGAGCTCGGGCGTCATCTCGAGCGGGTCACGG ACATCCCCTTCGATGTTTACCTGGAGGAGGCCGTTTTCCGGCCGCTGGGAATGGGGACGGCCGTCCTCGAAGGTTCGCCG GCGCATGCGGTGACGGCGACGCTGGCGGATGTCGGCGCGTTCGCCGCGGAACTGCTGGCGCCGAGCCTGGTCTCCGCGGC CACGTTCGCCGCGGCGACCTCGGTCGCCTTTCCGGGCCTTGCGGGGGTGCTTCCGGGTTTCGGCGCGCAGCACCCGAACG ACTGGGGCCTCGGGTTCGAGATACGCGGAACCAAGAGCCCGCATTGGACGGGTGCCACCAACAGCCCTGCGACTTTCGGT CATTTCGGGCGCTCGGGAACCTTCGTCTGGGTCGACCCAGCGGTGAACGTCGCGTGCGTAGTACTGACCGATCGGGATTT CGGCGACTGGGCGGGCGCGGCCTGGCCGGTTCTCTCCGCGGACGTCCTGGCTGAGCTGGAGGTGGCCCGGACGGCCTGA
Upstream 100 bases:
>100_bases CGGCGGAGTGGACGGGGCTGGGTGCGTGGATGGGCACGCCAGCCAGTGTGGCAGCCGGCGTCCCGACACCGGTCGGCCGG CGGTTCGTAGAGTGCCGGAC
Downstream 100 bases:
>100_bases GCGCCACAGTCCCGCCGGCTGGATTCGTCCTGTGACCGGGTGACCGCTTCGGGTGCCCGCCGGGTGCGGCCGCCGCGATG CCTGTCCTGTCCTCGCGCGG
Product: beta-lactamase
Products: NA
Alternate protein names: Beta-Lactamase Class C; Esterase; Beta Lactamase
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MDALRELDTWPVRTAAAVVLRSPGTGGAGGAAGAGGPRAVATQVGVAGDPAVRFRLASVSKLMSAYAVLVAIEEGALALD EPAGPESSTVAHLLAHASGLAFSGDRVMARPGTRRIYSNTGFEELGRHLERVTDIPFDVYLEEAVFRPLGMGTAVLEGSP AHAVTATLADVGAFAAELLAPSLVSAATFAAATSVAFPGLAGVLPGFGAQHPNDWGLGFEIRGTKSPHWTGATNSPATFG HFGRSGTFVWVDPAVNVACVVLTDRDFGDWAGAAWPVLSADVLAELEVARTA
Sequences:
>Translated_292_residues MDALRELDTWPVRTAAAVVLRSPGTGGAGGAAGAGGPRAVATQVGVAGDPAVRFRLASVSKLMSAYAVLVAIEEGALALD EPAGPESSTVAHLLAHASGLAFSGDRVMARPGTRRIYSNTGFEELGRHLERVTDIPFDVYLEEAVFRPLGMGTAVLEGSP AHAVTATLADVGAFAAELLAPSLVSAATFAAATSVAFPGLAGVLPGFGAQHPNDWGLGFEIRGTKSPHWTGATNSPATFG HFGRSGTFVWVDPAVNVACVVLTDRDFGDWAGAAWPVLSADVLAELEVARTA >Mature_292_residues MDALRELDTWPVRTAAAVVLRSPGTGGAGGAAGAGGPRAVATQVGVAGDPAVRFRLASVSKLMSAYAVLVAIEEGALALD EPAGPESSTVAHLLAHASGLAFSGDRVMARPGTRRIYSNTGFEELGRHLERVTDIPFDVYLEEAVFRPLGMGTAVLEGSP AHAVTATLADVGAFAAELLAPSLVSAATFAAATSVAFPGLAGVLPGFGAQHPNDWGLGFEIRGTKSPHWTGATNSPATFG HFGRSGTFVWVDPAVNVACVVLTDRDFGDWAGAAWPVLSADVLAELEVARTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29885; Mature: 29885
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALRELDTWPVRTAAAVVLRSPGTGGAGGAAGAGGPRAVATQVGVAGDPAVRFRLASVS CCHHHHCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH KLMSAYAVLVAIEEGALALDEPAGPESSTVAHLLAHASGLAFSGDRVMARPGTRRIYSNT HHHHHHEEEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCEECCCEEEECCCCCEECCCC GFEELGRHLERVTDIPFDVYLEEAVFRPLGMGTAVLEGSPAHAVTATLADVGAFAAELLA CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH PSLVSAATFAAATSVAFPGLAGVLPGFGAQHPNDWGLGFEIRGTKSPHWTGATNSPATFG HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC HFGRSGTFVWVDPAVNVACVVLTDRDFGDWAGAAWPVLSADVLAELEVARTA CCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDALRELDTWPVRTAAAVVLRSPGTGGAGGAAGAGGPRAVATQVGVAGDPAVRFRLASVS CCHHHHCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH KLMSAYAVLVAIEEGALALDEPAGPESSTVAHLLAHASGLAFSGDRVMARPGTRRIYSNT HHHHHHEEEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCEECCCEEEECCCCCEECCCC GFEELGRHLERVTDIPFDVYLEEAVFRPLGMGTAVLEGSPAHAVTATLADVGAFAAELLA CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH PSLVSAATFAAATSVAFPGLAGVLPGFGAQHPNDWGLGFEIRGTKSPHWTGATNSPATFG HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC HFGRSGTFVWVDPAVNVACVVLTDRDFGDWAGAAWPVLSADVLAELEVARTA CCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA