| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is birA [H]
Identifier: 158317655
GI number: 158317655
Start: 7183328
End: 7184257
Strand: Reverse
Name: birA [H]
Synonym: Franean1_5913
Alternate gene names: 158317655
Gene position: 7184257-7183328 (Counterclockwise)
Preceding gene: 158317660
Following gene: 158317654
Centisome position: 79.98
GC content: 76.24
Gene sequence:
>930_bases GTGCCAGTGCATCCCGCCGAATCCCCCGGGCGGCGAACGGCCCCTGTCGAGCCGGCCATCTCGCCCCCTGTCGCAGGTCA CAGCCCAGCCCCGGCGGTGCCGCCAGGGGCACGACGGCCGCTGGACACCGACACTCTCCGCCCGCTCGCCGCCCGCCTCG GGCTGGCGCTCGCCGTCGTCGACGAGATCGACTCGACCAACGCCGAGCTCGGACGGATCGCCCGCGGCCTGCCCGGCGCG GTGGGACTGCCCGCGGTCACCCGCCCGCCCACGGTTACGGACGGTGCCCCGGCCGGGCTTGTGCTCGCCGCCGAGCGGCA GACCGCGGGCCGCGGGCGGCTCGACCGCTCCTGGGAGTCAGCGGCCGGCGCCGGGCTCATGGTGTCCGTGCTGGTGCGCC CCGAGATCGAGCCCCGGTGGCTCGGCTGGCTGCCGATGGTCGTCGGCACCTCGCTCGTACGCACGCTGCGCAGGTACGCG GGCGTGCCCGCGGTGCTGAAATGGCCGAACGACGTGCAGGTCGACGGGGCGAAGCTCGCCGGCATTCTCGTGGAGCTGGC GCCGAGCCCTGCTGTGCCGCCGGCGGCCGTAATCGGGTTCGGGCTGAACGTCACCGCCCGCGCCGCGGAGCTGCCGCCGC GCTCCACCAGCCTGCTGCTGCTCGGCGCCGACCCCGCCCGCCTGGACCGCTCCGCCCTGCTCGGCGCCCTGCTGACCGAC CTCGTCGATGCGTTGGGCCGGTGGGAGGCGGCGCCCGAGCGGGCCCGCGGGGAGTACCGCGACACGTGCGCCACGCTGGG CCGGCGGGTCCGCGTCGAGCTTCCGGACGGGACGTCCACGCACGGCACGGCGACCGACGTCGACGAGCTCGGCCGGCTCA TCGTCGACGGGCAGGCGTTCAGTGCCGCCGACATCGTCCATCTGCGCTGA
Upstream 100 bases:
>100_bases GAAGCCGGGAGAGCCATACCGCGAAGCGTACGGCGGTCGGTGGTCCACGTGCTCGATTGATGTGGAGACCGTCTCACCAT GCCTCTGGGAAGGTGGTCCC
Downstream 100 bases:
>100_bases CGACGGCTGTGTTGTGCCAGCTGGGGGCGGCCCACCGGTGTGCCGCGGTCGTCCGGGATGCGACGATCAGGCGGTGGCGT TCCCCGACGACGTTCTGACC
Product: biotin--acetyl-CoA-carboxylase ligase
Products: NA
Alternate protein names: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase; Biotin--protein ligase [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPVHPAESPGRRTAPVEPAISPPVAGHSPAPAVPPGARRPLDTDTLRPLAARLGLALAVVDEIDSTNAELGRIARGLPGA VGLPAVTRPPTVTDGAPAGLVLAAERQTAGRGRLDRSWESAAGAGLMVSVLVRPEIEPRWLGWLPMVVGTSLVRTLRRYA GVPAVLKWPNDVQVDGAKLAGILVELAPSPAVPPAAVIGFGLNVTARAAELPPRSTSLLLLGADPARLDRSALLGALLTD LVDALGRWEAAPERARGEYRDTCATLGRRVRVELPDGTSTHGTATDVDELGRLIVDGQAFSAADIVHLR
Sequences:
>Translated_309_residues MPVHPAESPGRRTAPVEPAISPPVAGHSPAPAVPPGARRPLDTDTLRPLAARLGLALAVVDEIDSTNAELGRIARGLPGA VGLPAVTRPPTVTDGAPAGLVLAAERQTAGRGRLDRSWESAAGAGLMVSVLVRPEIEPRWLGWLPMVVGTSLVRTLRRYA GVPAVLKWPNDVQVDGAKLAGILVELAPSPAVPPAAVIGFGLNVTARAAELPPRSTSLLLLGADPARLDRSALLGALLTD LVDALGRWEAAPERARGEYRDTCATLGRRVRVELPDGTSTHGTATDVDELGRLIVDGQAFSAADIVHLR >Mature_308_residues PVHPAESPGRRTAPVEPAISPPVAGHSPAPAVPPGARRPLDTDTLRPLAARLGLALAVVDEIDSTNAELGRIARGLPGAV GLPAVTRPPTVTDGAPAGLVLAAERQTAGRGRLDRSWESAAGAGLMVSVLVRPEIEPRWLGWLPMVVGTSLVRTLRRYAG VPAVLKWPNDVQVDGAKLAGILVELAPSPAVPPAAVIGFGLNVTARAAELPPRSTSLLLLGADPARLDRSALLGALLTDL VDALGRWEAAPERARGEYRDTCATLGRRVRVELPDGTSTHGTATDVDELGRLIVDGQAFSAADIVHLR
Specific function: BirA acts both as a biotin-operon repressor and as the enzyme that synthesizes the corepressor, acetyl-CoA:carbon-dioxide ligase. This protein also activates biotin to form biotinyl-5'- adenylate and transfers the biotin moiety to biotin-accepting protein
COG id: COG0340
COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biotin--protein ligase family [H]
Homologues:
Organism=Escherichia coli, GI1790408, Length=196, Percent_Identity=33.6734693877551, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =6.3.4.15 [H]
Molecular weight: Translated: 32154; Mature: 32023
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVHPAESPGRRTAPVEPAISPPVAGHSPAPAVPPGARRPLDTDTLRPLAARLGLALAVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DEIDSTNAELGRIARGLPGAVGLPAVTRPPTVTDGAPAGLVLAAERQTAGRGRLDRSWES HHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHH AAGAGLMVSVLVRPEIEPRWLGWLPMVVGTSLVRTLRRYAGVPAVLKWPNDVQVDGAKLA HCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECHHHHE GILVELAPSPAVPPAAVIGFGLNVTARAAELPPRSTSLLLLGADPARLDRSALLGALLTD EEHEEECCCCCCCCHHHHCCCCCCEEHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH LVDALGRWEAAPERARGEYRDTCATLGRRVRVELPDGTSTHGTATDVDELGRLIVDGQAF HHHHHHHCCCCCHHHCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHEEECCCCC SAADIVHLR CCCCEEECC >Mature Secondary Structure PVHPAESPGRRTAPVEPAISPPVAGHSPAPAVPPGARRPLDTDTLRPLAARLGLALAVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DEIDSTNAELGRIARGLPGAVGLPAVTRPPTVTDGAPAGLVLAAERQTAGRGRLDRSWES HHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHH AAGAGLMVSVLVRPEIEPRWLGWLPMVVGTSLVRTLRRYAGVPAVLKWPNDVQVDGAKLA HCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEECHHHHE GILVELAPSPAVPPAAVIGFGLNVTARAAELPPRSTSLLLLGADPARLDRSALLGALLTD EEHEEECCCCCCCCHHHHCCCCCCEEHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH LVDALGRWEAAPERARGEYRDTCATLGRRVRVELPDGTSTHGTATDVDELGRLIVDGQAF HHHHHHHCCCCCHHHCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHEEECCCCC SAADIVHLR CCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7730294 [H]