| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317654
Identifier: 158317654
GI number: 158317654
Start: 7182745
End: 7183290
Strand: Reverse
Name: 158317654
Synonym: Franean1_5912
Alternate gene names: NA
Gene position: 7183290-7182745 (Counterclockwise)
Preceding gene: 158317655
Following gene: 158317648
Centisome position: 79.97
GC content: 69.05
Gene sequence:
>546_bases GTGTGCCGCGGTCGTCCGGGATGCGACGATCAGGCGGTGGCGTTCCCCGACGACGTTCTGACCGACGACGAAGATGTGGT CCTCCACCTGCACCCGCACTGGGGCAGCCTGGTGGTGCCGGCATTCTCCGTCGTCGCCGCGCTCGCCCTCACGACCTTCG GCGTGTTCTTCGTTCCGGACGGCTTCCTGCGTGAGGCGGTCCAGTACCTCATCCTCGCCCTGGGGCTGGCCGCCATCGGG TACTTCGGAGCGGCCCCCTGGCTGCGCTGGATCACCACCCACTATGTGATCACGACCGAGCGGCTGATGATCCGTGAGGG GATCGTGACCCGATCCGGGCGCGACATCCCGCTCGTCTGGCTCAACGACGTCTCCTATGAGCAGAGCCTGCTCGACCGGA TGCTCAGCGCGGGGACGCTCTCCATCGAGAGCGCTGGCGAGCGTGGGCGGATGGTCCTCTCACACGTCCCGCGGGTCGAG GATGTGCACGCCACGCTGTACGAGCTGGCCGAGGCGGCGGACGGCCGCCGCCGCTCCGGCGGCTGA
Upstream 100 bases:
>100_bases CTCGGCCGGCTCATCGTCGACGGGCAGGCGTTCAGTGCCGCCGACATCGTCCATCTGCGCTGACGACGGCTGTGTTGTGC CAGCTGGGGGCGGCCCACCG
Downstream 100 bases:
>100_bases CCGGATCACCACCGGGCCACGGCTCAGAGCGGGTCGAAGCCGCGCCACCAGGTGATCAGCCCGGCCGGGTCGTCGCTCTG CGCGACGAACGCCACCCGCT
Product: membrane-flanked domain-containing protein
Products: NA
Alternate protein names: Membrane-Flanked Domain Protein; Membrane-Flanked Domain; Membrane Flanked Domain-Containing Protein; Conserved Membrane Protein; Integral Membrane Protein
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MCRGRPGCDDQAVAFPDDVLTDDEDVVLHLHPHWGSLVVPAFSVVAALALTTFGVFFVPDGFLREAVQYLILALGLAAIG YFGAAPWLRWITTHYVITTERLMIREGIVTRSGRDIPLVWLNDVSYEQSLLDRMLSAGTLSIESAGERGRMVLSHVPRVE DVHATLYELAEAADGRRRSGG
Sequences:
>Translated_181_residues MCRGRPGCDDQAVAFPDDVLTDDEDVVLHLHPHWGSLVVPAFSVVAALALTTFGVFFVPDGFLREAVQYLILALGLAAIG YFGAAPWLRWITTHYVITTERLMIREGIVTRSGRDIPLVWLNDVSYEQSLLDRMLSAGTLSIESAGERGRMVLSHVPRVE DVHATLYELAEAADGRRRSGG >Mature_181_residues MCRGRPGCDDQAVAFPDDVLTDDEDVVLHLHPHWGSLVVPAFSVVAALALTTFGVFFVPDGFLREAVQYLILALGLAAIG YFGAAPWLRWITTHYVITTERLMIREGIVTRSGRDIPLVWLNDVSYEQSLLDRMLSAGTLSIESAGERGRMVLSHVPRVE DVHATLYELAEAADGRRRSGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19921; Mature: 19921
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRGRPGCDDQAVAFPDDVLTDDEDVVLHLHPHWGSLVVPAFSVVAALALTTFGVFFVPD CCCCCCCCCCCCEECCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC GFLREAVQYLILALGLAAIGYFGAAPWLRWITTHYVITTERLMIREGIVTRSGRDIPLVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE LNDVSYEQSLLDRMLSAGTLSIESAGERGRMVLSHVPRVEDVHATLYELAEAADGRRRSG ECCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC G C >Mature Secondary Structure MCRGRPGCDDQAVAFPDDVLTDDEDVVLHLHPHWGSLVVPAFSVVAALALTTFGVFFVPD CCCCCCCCCCCCEECCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC GFLREAVQYLILALGLAAIGYFGAAPWLRWITTHYVITTERLMIREGIVTRSGRDIPLVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE LNDVSYEQSLLDRMLSAGTLSIESAGERGRMVLSHVPRVEDVHATLYELAEAADGRRRSG ECCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA