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The map label for this gene is lytR [H]

Identifier: 158317645

GI number: 158317645

Start: 7171422

End: 7172948

Strand: Direct

Name: lytR [H]

Synonym: Franean1_5903

Alternate gene names: 158317645

Gene position: 7171422-7172948 (Clockwise)

Preceding gene: 158317644

Following gene: 158317646

Centisome position: 79.84

GC content: 74.33

Gene sequence:

>1527_bases
ATGAGACGCCCGAGAGACGAGCTTTCAGCCGAAAGATCCGACCTGACCTGGTCGGATGCGGCCGAGCCGCCCGCGCCCGC
GACCTGGCGTCCACCGAGCCCACGCGAGCCGCACTTCCGGGAAGCGCGCGTCGCGGAGCCGAATCTCCCAGAGCCGTGTT
CCGCGGAGCCGTACTTCACGGAGGCGCGCCTCGCGGAGCCGACGCCCGCGATCGGGTCGCACGCCGCGCTGCCACCCGAG
CTGAGCCCGCGTCTTGTCCGGCGGCGGCGCTCGCCGCTGCGCCGGCTGTCCGTCACGCTGGTCGCGATGATCTCGCTGTG
CGTCCTGGGGGCCACGTCGGTCGGGTGGGCGGCCTACCGGCACTTCGACAGCGCGATCGACCGCAAGGACTGGACGCCCG
TCGCCGGCGCCCGGCCCGCGGTGGTCCCGGGCGACCTGAACGTTCTCCTGCTCGGCAACGACAGCAGGGAGGGCACCCAC
GGCGAGTTCGGCGACCCGGGCGGCACCCGGGCGGACACGACGATCGTCGCCCACTTCGACGCGGACCGCTCCGTCACGCT
GGTGTCCTTCCCGCGCGACACGCTTGTGCCCGTCGTGCCCGCGGCCGCCGCCACCGCCCCGGACGGCCTGTCGAAAATCG
CGGACGTCATCCCGCTCGCGGGCGTGCCCGGCCTGATCTCGACCCTCGAGGCGTTCACCGGGCTCAAGATCGACCACACC
GTCTCGATCAACCTCGCCGGCTTCCGCGCGATGACGGATGCCGTCGGCGGCGTCACGGTATGCGTCCTGCCGCTGCCCGA
CGGCAGTACCCGCAACCTCCGGGACCGGGAGTCGGGGTGGCGGGGCCAGCTCGGCGAGAACCGGCTCAACGGCGACCAGG
CGCTGGCGTTCGTCCGCACCCGCAAGGCGCTGGGCGAGGAGCGGCTGCGCATCCTGCGCCAGCAGCAGTTCCTCTCCCGG
CTGCTCGACGCGGCGACGAGCGCCGGTGTGCTCACCAATCCCGCGCGGATCACCAGTCTGCTCGGCGCCGTCGGTGGCGC
GCTGCAGATCAGTGACAGCCTGACCCAGACGGAGATGCTCCGGCTGGCGAAGCGGATCAGCGAGCTCGGCCCGGGCGGCC
TGCGGTTCATCACGATCCCGACGTATGTCCCGCTGCCCTCGGACGGCGCCGTCGACGAGATGGGCACGATCCCACCGCAC
GGCATGGTCCTCCTGCACGACCCGGCCGGCCTGGAGGCGATCGTGGGCCCGATGCGGGCCACGGCCGAGAACGGCGGCGG
CTCCGGATCGCCCACAGCGCCGGGCGTCTCCGTGGCCGCCGGCGCCGCGCCGGGGGCAACCACGCCGGGGGGAACGGCGC
AGGCCTCCCCCTCCGCCAGCCCAAGCGGCACAGCGTCCGCCGGCACAGCGTCCGCCGGCACGACGGCCGACCGCACCGCG
GTCCCCGGCACGACGCCGCTCCCCGGCACCGCCGCTGGGACGGCATCGGCGGTGCCGGTGCCCGCCGACACCTCCTGCAC
CCCCTGA

Upstream 100 bases:

>100_bases
CCACGGCGCCGGCGAACGGCGCGAATGTGCGGGGCGTCACACACCACCCTCGGATCACCCCAAACAACCACCGGACATCA
CCGGGCGTCTGAAATCTGCG

Downstream 100 bases:

>100_bases
CCGCCGAGCCCGGCTGAGGGGGCCCGATCCCCGGTACGCGAACGGCGTCCGCGCCGTGTCGTGCCTGTGGACGTCCGAGC
TGGGGACGGGAGTCGGTAGC

Product: cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MRRPRDELSAERSDLTWSDAAEPPAPATWRPPSPREPHFREARVAEPNLPEPCSAEPYFTEARLAEPTPAIGSHAALPPE
LSPRLVRRRRSPLRRLSVTLVAMISLCVLGATSVGWAAYRHFDSAIDRKDWTPVAGARPAVVPGDLNVLLLGNDSREGTH
GEFGDPGGTRADTTIVAHFDADRSVTLVSFPRDTLVPVVPAAAATAPDGLSKIADVIPLAGVPGLISTLEAFTGLKIDHT
VSINLAGFRAMTDAVGGVTVCVLPLPDGSTRNLRDRESGWRGQLGENRLNGDQALAFVRTRKALGEERLRILRQQQFLSR
LLDAATSAGVLTNPARITSLLGAVGGALQISDSLTQTEMLRLAKRISELGPGGLRFITIPTYVPLPSDGAVDEMGTIPPH
GMVLLHDPAGLEAIVGPMRATAENGGGSGSPTAPGVSVAAGAAPGATTPGGTAQASPSASPSGTASAGTASAGTTADRTA
VPGTTPLPGTAAGTASAVPVPADTSCTP

Sequences:

>Translated_508_residues
MRRPRDELSAERSDLTWSDAAEPPAPATWRPPSPREPHFREARVAEPNLPEPCSAEPYFTEARLAEPTPAIGSHAALPPE
LSPRLVRRRRSPLRRLSVTLVAMISLCVLGATSVGWAAYRHFDSAIDRKDWTPVAGARPAVVPGDLNVLLLGNDSREGTH
GEFGDPGGTRADTTIVAHFDADRSVTLVSFPRDTLVPVVPAAAATAPDGLSKIADVIPLAGVPGLISTLEAFTGLKIDHT
VSINLAGFRAMTDAVGGVTVCVLPLPDGSTRNLRDRESGWRGQLGENRLNGDQALAFVRTRKALGEERLRILRQQQFLSR
LLDAATSAGVLTNPARITSLLGAVGGALQISDSLTQTEMLRLAKRISELGPGGLRFITIPTYVPLPSDGAVDEMGTIPPH
GMVLLHDPAGLEAIVGPMRATAENGGGSGSPTAPGVSVAAGAAPGATTPGGTAQASPSASPSGTASAGTASAGTTADRTA
VPGTTPLPGTAAGTASAVPVPADTSCTP
>Mature_508_residues
MRRPRDELSAERSDLTWSDAAEPPAPATWRPPSPREPHFREARVAEPNLPEPCSAEPYFTEARLAEPTPAIGSHAALPPE
LSPRLVRRRRSPLRRLSVTLVAMISLCVLGATSVGWAAYRHFDSAIDRKDWTPVAGARPAVVPGDLNVLLLGNDSREGTH
GEFGDPGGTRADTTIVAHFDADRSVTLVSFPRDTLVPVVPAAAATAPDGLSKIADVIPLAGVPGLISTLEAFTGLKIDHT
VSINLAGFRAMTDAVGGVTVCVLPLPDGSTRNLRDRESGWRGQLGENRLNGDQALAFVRTRKALGEERLRILRQQQFLSR
LLDAATSAGVLTNPARITSLLGAVGGALQISDSLTQTEMLRLAKRISELGPGGLRFITIPTYVPLPSDGAVDEMGTIPPH
GMVLLHDPAGLEAIVGPMRATAENGGGSGSPTAPGVSVAAGAAPGATTPGGTAQASPSASPSGTASAGTASAGTTADRTA
VPGTTPLPGTAAGTASAVPVPADTSCTP

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 52408; Mature: 52408

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPRDELSAERSDLTWSDAAEPPAPATWRPPSPREPHFREARVAEPNLPEPCSAEPYFT
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EARLAEPTPAIGSHAALPPELSPRLVRRRRSPLRRLSVTLVAMISLCVLGATSVGWAAYR
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HFDSAIDRKDWTPVAGARPAVVPGDLNVLLLGNDSREGTHGEFGDPGGTRADTTIVAHFD
HHHHHHCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEC
ADRSVTLVSFPRDTLVPVVPAAAATAPDGLSKIADVIPLAGVPGLISTLEAFTGLKIDHT
CCCCEEEEECCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEE
VSINLAGFRAMTDAVGGVTVCVLPLPDGSTRNLRDRESGWRGQLGENRLNGDQALAFVRT
EEEEECHHHHHHHHCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHH
RKALGEERLRILRQQQFLSRLLDAATSAGVLTNPARITSLLGAVGGALQISDSLTQTEML
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHH
RLAKRISELGPGGLRFITIPTYVPLPSDGAVDEMGTIPPHGMVLLHDPAGLEAIVGPMRA
HHHHHHHHCCCCCEEEEECCCEECCCCCCCCHHCCCCCCCCEEEEECCCCHHHHHHHHHH
TAENGGGSGSPTAPGVSVAAGAAPGATTPGGTAQASPSASPSGTASAGTASAGTTADRTA
HCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VPGTTPLPGTAAGTASAVPVPADTSCTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRPRDELSAERSDLTWSDAAEPPAPATWRPPSPREPHFREARVAEPNLPEPCSAEPYFT
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EARLAEPTPAIGSHAALPPELSPRLVRRRRSPLRRLSVTLVAMISLCVLGATSVGWAAYR
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HFDSAIDRKDWTPVAGARPAVVPGDLNVLLLGNDSREGTHGEFGDPGGTRADTTIVAHFD
HHHHHHCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEC
ADRSVTLVSFPRDTLVPVVPAAAATAPDGLSKIADVIPLAGVPGLISTLEAFTGLKIDHT
CCCCEEEEECCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEE
VSINLAGFRAMTDAVGGVTVCVLPLPDGSTRNLRDRESGWRGQLGENRLNGDQALAFVRT
EEEEECHHHHHHHHCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHH
RKALGEERLRILRQQQFLSRLLDAATSAGVLTNPARITSLLGAVGGALQISDSLTQTEML
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHH
RLAKRISELGPGGLRFITIPTYVPLPSDGAVDEMGTIPPHGMVLLHDPAGLEAIVGPMRA
HHHHHHHHCCCCCEEEEECCCEECCCCCCCCHHCCCCCCCCEEEEECCCCHHHHHHHHHH
TAENGGGSGSPTAPGVSVAAGAAPGATTPGGTAQASPSASPSGTASAGTASAGTTADRTA
HCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VPGTTPLPGTAAGTASAVPVPADTSCTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA