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The map label for this gene is arnC [H]

Identifier: 158317627

GI number: 158317627

Start: 7140197

End: 7141141

Strand: Reverse

Name: arnC [H]

Synonym: Franean1_5883

Alternate gene names: 158317627

Gene position: 7141141-7140197 (Counterclockwise)

Preceding gene: 158317631

Following gene: 158317626

Centisome position: 79.5

GC content: 65.19

Gene sequence:

>945_bases
GTGAGTGTCAGCGCCATCCATCCAGCCGAACAGCCGACCAAGACGGCTGTGGAGACACCGCCCTACGTGACCGTGGTGCT
CCCCTGTTACAACGAGCAGGATCACGTCGTCCTCGAGCTCGAGCGCATCACGGCGGCGATGGACGTCAGCGGGTACAGCT
ACGAGCTGTTGGTGATCGACGACAAGTCGACCGACGGCACGCTGGACGTCCTGCGCGACGTGGCGGCGAACTTCCCCCAT
ATGCGGCTGATGCCCTTCCGGCGCAACGGTGGCTCGGGCACGGCGCGGCGCATCGGCACGCAGGAGGCCCGCGGGAAGAT
CGTCGTCTGGACCGACGCGGACATGACGTACCCGAACGAGCGCATTCCGGAGTTTGTTCGCTACCTGGACGAAAACCCTG
ACGTCGATCAGGTCGTCGGTGCACGGACGACCGAGGAGGGCACGCACAAGTGGGCCCGCGTGCCGGCCAAGTGGTTCATT
CGCATGGTCGCGCAGCGGCTGTCCGGGACGAAGATTCCCGACCTGAACTCCGGCCTGCGCGCGTTCCGCCGGGACGTGTC
GCTTCCGTACCTGCGCCTGCTCCCGCCGGGATTCTCCTGCGTCACCACCATCACCATGGCGTTCCTGTCCAACCAGCACC
CCGTGGACTACCTGCCGATCCACTACGCGAAGCGCTCGGGGACGTCCAAGTTCCACCCCTTCAAGGACGCCCGCCGATAC
ATCCTGCAGGTGCTGCGGATGGTCATGTACTTCGACCCGATCAAGGTCCTGATGCCGGTCGCCCTGTGGATCATGGCGCT
CGGTTTCGTGAAATTGATCGTCGACCTCGTCCGGTACGACCTGCGGGTGACCACCTCCACGCTGCTCGCGATCCTCGTCG
GGTTCCAGATCGTGGTCCTCGCGCTGATCGGTGACCTGGTGGCCCGGTCACGCAGCGACACCTGA

Upstream 100 bases:

>100_bases
CGGGCCCCGGCGCAGGCCGTGTCACCCTGGAGAGCGGACTGCCCGCGACCTGCCGGGGACGGAACGCGGGCGCGCAACGA
CGACCGGGAGTCACACCGAC

Downstream 100 bases:

>100_bases
GCCTCGGCGTGCGTATCGCGATCATCGGGCCGACCCACCCGTACAAGGGCGGCATAGCCCAGCACACCACCGAGCTGGCG
CACCGCCTCGCCGCGCGCGG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSVSAIHPAEQPTKTAVETPPYVTVVLPCYNEQDHVVLELERITAAMDVSGYSYELLVIDDKSTDGTLDVLRDVAANFPH
MRLMPFRRNGGSGTARRIGTQEARGKIVVWTDADMTYPNERIPEFVRYLDENPDVDQVVGARTTEEGTHKWARVPAKWFI
RMVAQRLSGTKIPDLNSGLRAFRRDVSLPYLRLLPPGFSCVTTITMAFLSNQHPVDYLPIHYAKRSGTSKFHPFKDARRY
ILQVLRMVMYFDPIKVLMPVALWIMALGFVKLIVDLVRYDLRVTTSTLLAILVGFQIVVLALIGDLVARSRSDT

Sequences:

>Translated_314_residues
MSVSAIHPAEQPTKTAVETPPYVTVVLPCYNEQDHVVLELERITAAMDVSGYSYELLVIDDKSTDGTLDVLRDVAANFPH
MRLMPFRRNGGSGTARRIGTQEARGKIVVWTDADMTYPNERIPEFVRYLDENPDVDQVVGARTTEEGTHKWARVPAKWFI
RMVAQRLSGTKIPDLNSGLRAFRRDVSLPYLRLLPPGFSCVTTITMAFLSNQHPVDYLPIHYAKRSGTSKFHPFKDARRY
ILQVLRMVMYFDPIKVLMPVALWIMALGFVKLIVDLVRYDLRVTTSTLLAILVGFQIVVLALIGDLVARSRSDT
>Mature_313_residues
SVSAIHPAEQPTKTAVETPPYVTVVLPCYNEQDHVVLELERITAAMDVSGYSYELLVIDDKSTDGTLDVLRDVAANFPHM
RLMPFRRNGGSGTARRIGTQEARGKIVVWTDADMTYPNERIPEFVRYLDENPDVDQVVGARTTEEGTHKWARVPAKWFIR
MVAQRLSGTKIPDLNSGLRAFRRDVSLPYLRLLPPGFSCVTTITMAFLSNQHPVDYLPIHYAKRSGTSKFHPFKDARRYI
LQVLRMVMYFDPIKVLMPVALWIMALGFVKLIVDLVRYDLRVTTSTLLAILVGFQIVVLALIGDLVARSRSDT

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=168, Percent_Identity=30.952380952381, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1788588, Length=309, Percent_Identity=28.4789644012945, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1788692, Length=299, Percent_Identity=21.7391304347826, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787259, Length=120, Percent_Identity=30, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790044, Length=134, Percent_Identity=29.1044776119403, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71999402, Length=173, Percent_Identity=28.3236994219653, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24585265, Length=221, Percent_Identity=30.7692307692308, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 35482; Mature: 35351

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSAIHPAEQPTKTAVETPPYVTVVLPCYNEQDHVVLELERITAAMDVSGYSYELLVID
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHHHHCCCCCEEEEEEEE
DKSTDGTLDVLRDVAANFPHMRLMPFRRNGGSGTARRIGTQEARGKIVVWTDADMTYPNE
CCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHCCCHHHCCEEEEEECCCCCCCHH
RIPEFVRYLDENPDVDQVVGARTTEEGTHKWARVPAKWFIRMVAQRLSGTKIPDLNSGLR
HHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHH
AFRRDVSLPYLRLLPPGFSCVTTITMAFLSNQHPVDYLPIHYAKRSGTSKFHPFKDARRY
HHHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCEECHHHHHCCCCCCCCCHHHHHHH
ILQVLRMVMYFDPIKVLMPVALWIMALGFVKLIVDLVRYDLRVTTSTLLAILVGFQIVVL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIGDLVARSRSDT
HHHHHHHHHCCCCC
>Mature Secondary Structure 
SVSAIHPAEQPTKTAVETPPYVTVVLPCYNEQDHVVLELERITAAMDVSGYSYELLVID
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHHHHCCCCCEEEEEEEE
DKSTDGTLDVLRDVAANFPHMRLMPFRRNGGSGTARRIGTQEARGKIVVWTDADMTYPNE
CCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHCCCHHHCCEEEEEECCCCCCCHH
RIPEFVRYLDENPDVDQVVGARTTEEGTHKWARVPAKWFIRMVAQRLSGTKIPDLNSGLR
HHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHH
AFRRDVSLPYLRLLPPGFSCVTTITMAFLSNQHPVDYLPIHYAKRSGTSKFHPFKDARRY
HHHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCEECHHHHHCCCCCCCCCHHHHHHH
ILQVLRMVMYFDPIKVLMPVALWIMALGFVKLIVDLVRYDLRVTTSTLLAILVGFQIVVL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIGDLVARSRSDT
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA