| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317631
Identifier: 158317631
GI number: 158317631
Start: 7147296
End: 7148579
Strand: Reverse
Name: 158317631
Synonym: Franean1_5888
Alternate gene names: NA
Gene position: 7148579-7147296 (Counterclockwise)
Preceding gene: 158317632
Following gene: 158317627
Centisome position: 79.59
GC content: 74.3
Gene sequence:
>1284_bases GTGCGCGACAGCTTCGCCGAGCTCGCGGCTGTCACCTACGACGGCGGCGACCACGCCCCCGAGATCACCGAGATCACCGA GAAGACACTCGCCCCCCTGCTGCTGCACTCACTGTCGGACCTGCGCGAGATGTGGGTTCCGCTGCTGGAGGCATCCGGCG CGCGCAGCATCGCCGAGATCGGCTCGGAGAGCGGCGTGACGACGTCCCTGCTCGTCGACCTGCTGCGGCGCGGCGGCGGC GGGCGGCTGCTGGTCATCGACCCCGAACCGGGCGTCGCGCCGTCCTCCGGCGGTGGTCTCGACGTCGAGGTCATCCGTGG CTACAGCCCCGAGGCGCTCGACGGCCACGCCCCGACCGACGCCTATCTGATCGACGGAGACCACAACTACGCCACGGTCC GCGGCGAGCTCGGGATGATCGAGACCGCCGTGCGTGACTTCGGCCGCTCCTACTTCCCACTGGTGATCCTGCACGACGTC GGATGGCCCGCCGGCCGCCGGGACCAGTACTACGCCCCCGACCGCATCCCGGAGTCGGTGCGCCAGCCCAACTCGTGGGA CGTCGGCGTGGAGATCGACAGGACGGACGCCGTCCCCGGCCGGGGCTTCCGCGGCATGGGCGCGTTCTCCTGGGCCCTGG CCGAGGGCGGCCCCCGCAACGGTGTGCGCACCGCCGTCGAGGACTTCGTCGCCGAGCATCCCGACCTGCGCTTCTTCACC ATCGCGCCGATCTTCGGCCTCGGTGTGATCCTCGACCGCCGCGCCCCCTGGGCCCGCCGCGCCGCCGACCTGCTCGCCCC CTGGGTCGCCAACACCCTGCTGGCCCGGATGGAGCGCAACCGCGTCGACCTGTACCTGCGTGTCCTCGCGCTGCAGGACG ACGCGGTCGGCGCTGCCCGCGCCCGGCAGCGGGAATGGGCCCGGATCGACGCCGAGCGCAGCGAAGCCGCCGCCCGTGAC CTGCAGCGACTGAACCGGATCAGCGAGCTCGAGCAGGAGCTGGCCGCCGCGCGCAAGGTCCCCCGCCCGCCGTGGGCGCC AGCATCCCCGGACGAGCCGAAGCTGGTCACCGCGGCCCGGATCGCCAACGCCGCGCTGCGCGCACGGCTCGGGGGCGGCT CCGGCGCACAGGCCGCGGCAGGCTCTCCCGGCGGCCGCGTGGGCAGTGCCGTTGTCGCCCGGCTGGGCTCCGGCCTGACC CGCCTCGCCGACCACGGATCCACCACGAGCCGCCCCGCCACCGGCTCCGCCGGGCCCGCCGCTTCCGCTGACCCCGAGCA CTAG
Upstream 100 bases:
>100_bases GGGTAGCGCCGCCCCGGGTGACGAGGCGTCAGCCGGCAGTGAGTCGGGTGATGCCGGGGCAGGCGGGCGCGCACCCGCCG CCGCGGGGACGGATGTCGAG
Downstream 100 bases:
>100_bases GCAGGCGGTCCGGTGACCGCGGCGGTTGGTCAGAGTGGCAGCGTCTGCGCCGGTCGCACGACGATCTCGGGGATGTTGGG TCGGGAGCGGGGTGCCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MRDSFAELAAVTYDGGDHAPEITEITEKTLAPLLLHSLSDLREMWVPLLEASGARSIAEIGSESGVTTSLLVDLLRRGGG GRLLVIDPEPGVAPSSGGGLDVEVIRGYSPEALDGHAPTDAYLIDGDHNYATVRGELGMIETAVRDFGRSYFPLVILHDV GWPAGRRDQYYAPDRIPESVRQPNSWDVGVEIDRTDAVPGRGFRGMGAFSWALAEGGPRNGVRTAVEDFVAEHPDLRFFT IAPIFGLGVILDRRAPWARRAADLLAPWVANTLLARMERNRVDLYLRVLALQDDAVGAARARQREWARIDAERSEAAARD LQRLNRISELEQELAAARKVPRPPWAPASPDEPKLVTAARIANAALRARLGGGSGAQAAAGSPGGRVGSAVVARLGSGLT RLADHGSTTSRPATGSAGPAASADPEH
Sequences:
>Translated_427_residues MRDSFAELAAVTYDGGDHAPEITEITEKTLAPLLLHSLSDLREMWVPLLEASGARSIAEIGSESGVTTSLLVDLLRRGGG GRLLVIDPEPGVAPSSGGGLDVEVIRGYSPEALDGHAPTDAYLIDGDHNYATVRGELGMIETAVRDFGRSYFPLVILHDV GWPAGRRDQYYAPDRIPESVRQPNSWDVGVEIDRTDAVPGRGFRGMGAFSWALAEGGPRNGVRTAVEDFVAEHPDLRFFT IAPIFGLGVILDRRAPWARRAADLLAPWVANTLLARMERNRVDLYLRVLALQDDAVGAARARQREWARIDAERSEAAARD LQRLNRISELEQELAAARKVPRPPWAPASPDEPKLVTAARIANAALRARLGGGSGAQAAAGSPGGRVGSAVVARLGSGLT RLADHGSTTSRPATGSAGPAASADPEH >Mature_427_residues MRDSFAELAAVTYDGGDHAPEITEITEKTLAPLLLHSLSDLREMWVPLLEASGARSIAEIGSESGVTTSLLVDLLRRGGG GRLLVIDPEPGVAPSSGGGLDVEVIRGYSPEALDGHAPTDAYLIDGDHNYATVRGELGMIETAVRDFGRSYFPLVILHDV GWPAGRRDQYYAPDRIPESVRQPNSWDVGVEIDRTDAVPGRGFRGMGAFSWALAEGGPRNGVRTAVEDFVAEHPDLRFFT IAPIFGLGVILDRRAPWARRAADLLAPWVANTLLARMERNRVDLYLRVLALQDDAVGAARARQREWARIDAERSEAAARD LQRLNRISELEQELAAARKVPRPPWAPASPDEPKLVTAARIANAALRARLGGGSGAQAAAGSPGGRVGSAVVARLGSGLT RLADHGSTTSRPATGSAGPAASADPEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45549; Mature: 45549
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDSFAELAAVTYDGGDHAPEITEITEKTLAPLLLHSLSDLREMWVPLLEASGARSIAEI CCCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH GSESGVTTSLLVDLLRRGGGGRLLVIDPEPGVAPSSGGGLDVEVIRGYSPEALDGHAPTD CCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC AYLIDGDHNYATVRGELGMIETAVRDFGRSYFPLVILHDVGWPAGRRDQYYAPDRIPESV CEEEECCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHH RQPNSWDVGVEIDRTDAVPGRGFRGMGAFSWALAEGGPRNGVRTAVEDFVAEHPDLRFFT CCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEE IAPIFGLGVILDRRAPWARRAADLLAPWVANTLLARMERNRVDLYLRVLALQDDAVGAAR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHH ARQREWARIDAERSEAAARDLQRLNRISELEQELAAARKVPRPPWAPASPDEPKLVTAAR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH IANAALRARLGGGSGAQAAAGSPGGRVGSAVVARLGSGLTRLADHGSTTSRPATGSAGPA HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC ASADPEH CCCCCCC >Mature Secondary Structure MRDSFAELAAVTYDGGDHAPEITEITEKTLAPLLLHSLSDLREMWVPLLEASGARSIAEI CCCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH GSESGVTTSLLVDLLRRGGGGRLLVIDPEPGVAPSSGGGLDVEVIRGYSPEALDGHAPTD CCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC AYLIDGDHNYATVRGELGMIETAVRDFGRSYFPLVILHDVGWPAGRRDQYYAPDRIPESV CEEEECCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHH RQPNSWDVGVEIDRTDAVPGRGFRGMGAFSWALAEGGPRNGVRTAVEDFVAEHPDLRFFT CCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEE IAPIFGLGVILDRRAPWARRAADLLAPWVANTLLARMERNRVDLYLRVLALQDDAVGAAR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHH ARQREWARIDAERSEAAARDLQRLNRISELEQELAAARKVPRPPWAPASPDEPKLVTAAR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH IANAALRARLGGGSGAQAAAGSPGGRVGSAVVARLGSGLTRLADHGSTTSRPATGSAGPA HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC ASADPEH CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA