| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317610
Identifier: 158317610
GI number: 158317610
Start: 7120005
End: 7120286
Strand: Reverse
Name: 158317610
Synonym: Franean1_5866
Alternate gene names: NA
Gene position: 7120286-7120005 (Counterclockwise)
Preceding gene: 158317615
Following gene: 158317609
Centisome position: 79.27
GC content: 77.66
Gene sequence:
>282_bases ATGTCCGCGATCAGGACCCCCCGGACTACCAGGAGCCCCCGCACGACCAAGAGCCTCGAAGCCCTCTCCGCCACCCTCAA CCGAGCCCTCGCCGGGGCCCGCGCGCCACAGGTCGCGGCCGCCCGGCACGCGGACCTACGCGGCGGCGCGTCCGCGCCGG GAGCCGCGCGAACCGACACGCTGGCCGCCCGCAGGCGGACGAACCTGCTCATCGGCACTCTCGAGCGGCTGCGGAACCCG GCGGCCGGCCCCCGGGCCACCCGCGGCACCGGCACAGCCTGA
Upstream 100 bases:
>100_bases GCCGCGCGTGACGATCCGCGCTGGTAGGAGCCATCTCTTGATTCTGGTTAGAGAGAGCTGTGAGATGGACCTAGCTCTCC ACGTCGCTGGAAGGACCGCC
Downstream 100 bases:
>100_bases CCTGGACCCGCGCCGACCCGCCCTGACGGCGGCCCGGCCCCGCGGGGACATCCACCTACGATCATCCATCGACTACCCAG GGTGAACGCATGACGAGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSAIRTPRTTRSPRTTKSLEALSATLNRALAGARAPQVAAARHADLRGGASAPGAARTDTLAARRRTNLLIGTLERLRNP AAGPRATRGTGTA
Sequences:
>Translated_93_residues MSAIRTPRTTRSPRTTKSLEALSATLNRALAGARAPQVAAARHADLRGGASAPGAARTDTLAARRRTNLLIGTLERLRNP AAGPRATRGTGTA >Mature_92_residues SAIRTPRTTRSPRTTKSLEALSATLNRALAGARAPQVAAARHADLRGGASAPGAARTDTLAARRRTNLLIGTLERLRNPA AGPRATRGTGTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9611; Mature: 9480
Theoretical pI: Translated: 12.84; Mature: 12.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIRTPRTTRSPRTTKSLEALSATLNRALAGARAPQVAAARHADLRGGASAPGAARTDT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHH LAARRRTNLLIGTLERLRNPAAGPRATRGTGTA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SAIRTPRTTRSPRTTKSLEALSATLNRALAGARAPQVAAARHADLRGGASAPGAARTDT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHH LAARRRTNLLIGTLERLRNPAAGPRATRGTGTA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA