| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317598
Identifier: 158317598
GI number: 158317598
Start: 7103468
End: 7104886
Strand: Direct
Name: 158317598
Synonym: Franean1_5854
Alternate gene names: NA
Gene position: 7103468-7104886 (Clockwise)
Preceding gene: 158317597
Following gene: 158317599
Centisome position: 79.09
GC content: 75.12
Gene sequence:
>1419_bases GTGACCGAGGATCTACCACCCGAGCCGGTCGCGTCGCTGCTCGCGGCCGGCCACCCGGAGCGGGTGTGGGAGCTGCTTCC GAGCCTGACCTTCGGTCACGCGCTGCGGGCGGCCTCGCTTCTGCACCGAACCGGCTGGCGCCCCGGCGGCCGGGGCGACG GGCACGGTGACGCCCACGCGAGGCGGAGCGCGGAGCTGTTCGACCTGCTGGTGCACACGAACCAGCAGGTGGGCCTGGGC CGGAGCGGCCGAGACGCGGCCTCCGCCCTCAGGTTCCCACCCGTCGCCCGCGGGCTGACCGGGCTCGGGATCGCCACCGC GGCACAACCGTCGCTGGCGCCCGATACAGGCCTGATCGCCCTCGTCCACCGGGACGGGTCGTTCCGGGTCGACCACCTGA CGATCTGGGATCCGTGGAGCTGCCGGCGGGTGTGGTGGCATCCGCTGCCCCGTGGGCTCGGTGGCGGCCGGTTCACCCGG CTGCTGTTCGCCGCCGACGGCCAGATCTTCGCCTGCCACCGGCCGGACCGGTTCCCGCGCGAGCCCGAGCGCCTGCTCGT GTTCGGCTACGACGCCGGCTCGTTGGTCGTCCGCGAGCTGGACTCCGCCCCTTCGGGCTTCTACGCGCTGGCACCCATGC CCGCCGGGCCGGACGAGGCGGTCTGCGCCGTGCGCGCGGACGGTGAAATGACGGTGTGGCCGGCGGTGCCGGACGGCGCG CCTGGCCACCCGCGGCCGCCGTCCGTCCGCCTGCCCATACCGGCCGGCCACGAGCTGGACGTCGGACTGCGCCCCGACGC CAACCTGGCCGTCTCCGCGGACGGCGAACGGATCTGCCTTGTCACCCGACGGCGCCCCGGGACGCCGCGTCAGGTCACTG TCGCCGATCGGCGGACGGGAAAGGAGCTCGCCGCCGCCACGCTCGAGTCCGCCGTGGCGGAGGTCTCCTTCCTCCCCGAC GGCGAGACGGCCGCGTCCCGCGCGGGGAGCACCATGTCGTTCTTCGGCGGGAGCGTGCCGGTCGCGGACTGGCCCGTCGG GCCCGCCCAGCGCGTGCTCTTCCTCCCGGATGGCGAGCATGTGCTGGTCGCGCACGCGAGCGGGTCGATCGAGGTCCACA CCTGGCCGGACCGCGCGCTGGTCGGCTTTCTCCGCGGGCCGGAGTTCCTGATCACGCTGGCCGTCTCGCCCGCCGGGGAC AGGATCGTGGCCCTCGGCGAGCGGGGGCGGGTGCAGACCACCGTCTGGGACAGCGCGGTGCTGCGCCTGTTGCACCGACC GCTCGACGAGGCCGCCCCGCGGGCGCCGGCCCTCGTCCGGGCGATGTCCGCGCAGGCGGCCGGTGACCGGTGGGAGCTCC AGCTGCGCGCGCTGGCGGCACTCCTCGAACACCGACCCCAACCGGGCCATCGGGAATAA
Upstream 100 bases:
>100_bases ACCGGGACAGTGGACCCACTGGCGGCGTTGGCTGGGCGCTGGCGGGTTTCGGCCGGCGCTGGCGTAACCCGGGTAGATGA ACACGGCGCGGGGCGGTGAC
Downstream 100 bases:
>100_bases TAGACGCCGGCCGGCCGATAAAGGCCTACCGAACGGCGAAACATTGATTTCCGAACTACGCTCGATTCATGACCGAAGTA GAGCGCGGTACGCGCCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MTEDLPPEPVASLLAAGHPERVWELLPSLTFGHALRAASLLHRTGWRPGGRGDGHGDAHARRSAELFDLLVHTNQQVGLG RSGRDAASALRFPPVARGLTGLGIATAAQPSLAPDTGLIALVHRDGSFRVDHLTIWDPWSCRRVWWHPLPRGLGGGRFTR LLFAADGQIFACHRPDRFPREPERLLVFGYDAGSLVVRELDSAPSGFYALAPMPAGPDEAVCAVRADGEMTVWPAVPDGA PGHPRPPSVRLPIPAGHELDVGLRPDANLAVSADGERICLVTRRRPGTPRQVTVADRRTGKELAAATLESAVAEVSFLPD GETAASRAGSTMSFFGGSVPVADWPVGPAQRVLFLPDGEHVLVAHASGSIEVHTWPDRALVGFLRGPEFLITLAVSPAGD RIVALGERGRVQTTVWDSAVLRLLHRPLDEAAPRAPALVRAMSAQAAGDRWELQLRALAALLEHRPQPGHRE
Sequences:
>Translated_472_residues MTEDLPPEPVASLLAAGHPERVWELLPSLTFGHALRAASLLHRTGWRPGGRGDGHGDAHARRSAELFDLLVHTNQQVGLG RSGRDAASALRFPPVARGLTGLGIATAAQPSLAPDTGLIALVHRDGSFRVDHLTIWDPWSCRRVWWHPLPRGLGGGRFTR LLFAADGQIFACHRPDRFPREPERLLVFGYDAGSLVVRELDSAPSGFYALAPMPAGPDEAVCAVRADGEMTVWPAVPDGA PGHPRPPSVRLPIPAGHELDVGLRPDANLAVSADGERICLVTRRRPGTPRQVTVADRRTGKELAAATLESAVAEVSFLPD GETAASRAGSTMSFFGGSVPVADWPVGPAQRVLFLPDGEHVLVAHASGSIEVHTWPDRALVGFLRGPEFLITLAVSPAGD RIVALGERGRVQTTVWDSAVLRLLHRPLDEAAPRAPALVRAMSAQAAGDRWELQLRALAALLEHRPQPGHRE >Mature_471_residues TEDLPPEPVASLLAAGHPERVWELLPSLTFGHALRAASLLHRTGWRPGGRGDGHGDAHARRSAELFDLLVHTNQQVGLGR SGRDAASALRFPPVARGLTGLGIATAAQPSLAPDTGLIALVHRDGSFRVDHLTIWDPWSCRRVWWHPLPRGLGGGRFTRL LFAADGQIFACHRPDRFPREPERLLVFGYDAGSLVVRELDSAPSGFYALAPMPAGPDEAVCAVRADGEMTVWPAVPDGAP GHPRPPSVRLPIPAGHELDVGLRPDANLAVSADGERICLVTRRRPGTPRQVTVADRRTGKELAAATLESAVAEVSFLPDG ETAASRAGSTMSFFGGSVPVADWPVGPAQRVLFLPDGEHVLVAHASGSIEVHTWPDRALVGFLRGPEFLITLAVSPAGDR IVALGERGRVQTTVWDSAVLRLLHRPLDEAAPRAPALVRAMSAQAAGDRWELQLRALAALLEHRPQPGHRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50611; Mature: 50480
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDLPPEPVASLLAAGHPERVWELLPSLTFGHALRAASLLHRTGWRPGGRGDGHGDAHA CCCCCCCHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH RRSAELFDLLVHTNQQVGLGRSGRDAASALRFPPVARGLTGLGIATAAQPSLAPDTGLIA HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCCEEECCCCCCCCCCCEEE LVHRDGSFRVDHLTIWDPWSCRRVWWHPLPRGLGGGRFTRLLFAADGQIFACHRPDRFPR EEECCCCEEEEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCC EPERLLVFGYDAGSLVVRELDSAPSGFYALAPMPAGPDEAVCAVRADGEMTVWPAVPDGA CCCEEEEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCC PGHPRPPSVRLPIPAGHELDVGLRPDANLAVSADGERICLVTRRRPGTPRQVTVADRRTG CCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEEECCCCCC KELAAATLESAVAEVSFLPDGETAASRAGSTMSFFGGSVPVADWPVGPAQRVLFLPDGEH HHHHHHHHHHHHHHEEECCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCE VLVAHASGSIEVHTWPDRALVGFLRGPEFLITLAVSPAGDRIVALGERGRVQTTVWDSAV EEEEECCCEEEEEECCCHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCEEEEHHHHHH LRLLHRPLDEAAPRAPALVRAMSAQAAGDRWELQLRALAALLEHRPQPGHRE HHHHHCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TEDLPPEPVASLLAAGHPERVWELLPSLTFGHALRAASLLHRTGWRPGGRGDGHGDAHA CCCCCCHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH RRSAELFDLLVHTNQQVGLGRSGRDAASALRFPPVARGLTGLGIATAAQPSLAPDTGLIA HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCCEEECCCCCCCCCCCEEE LVHRDGSFRVDHLTIWDPWSCRRVWWHPLPRGLGGGRFTRLLFAADGQIFACHRPDRFPR EEECCCCEEEEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCC EPERLLVFGYDAGSLVVRELDSAPSGFYALAPMPAGPDEAVCAVRADGEMTVWPAVPDGA CCCEEEEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCC PGHPRPPSVRLPIPAGHELDVGLRPDANLAVSADGERICLVTRRRPGTPRQVTVADRRTG CCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEEECCCCCC KELAAATLESAVAEVSFLPDGETAASRAGSTMSFFGGSVPVADWPVGPAQRVLFLPDGEH HHHHHHHHHHHHHHEEECCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCE VLVAHASGSIEVHTWPDRALVGFLRGPEFLITLAVSPAGDRIVALGERGRVQTTVWDSAV EEEEECCCEEEEEECCCHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCEEEEHHHHHH LRLLHRPLDEAAPRAPALVRAMSAQAAGDRWELQLRALAALLEHRPQPGHRE HHHHHCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA