| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yhgH [C]
Identifier: 158317586
GI number: 158317586
Start: 7087296
End: 7088366
Strand: Reverse
Name: yhgH [C]
Synonym: Franean1_5842
Alternate gene names: 158317586
Gene position: 7088366-7087296 (Counterclockwise)
Preceding gene: 158317592
Following gene: 158317585
Centisome position: 78.92
GC content: 78.06
Gene sequence:
>1071_bases ATGCCGGCGTGGCCGGTGCGGCGCAGCGGGCAGTTCATGGCCCCGTGCCGGGTTCTGCTCTGGCCGGGTCCGGCCCGCGT CGTCCACAGCCGCCGCGTGCGGTGCTGTCTGTCCACAACTCGGGTCCGGCGATGGCGAAGCCGGTCGATCACCGGTCATT CTCGTCCGGTGACCCGTTTTCCCCACCTCGCCGAGGCCCTGACGATCCTCGCGGATCTCGTGCTGCCGCGCACCTGCGCG GGCTGCGGCCGGCCCGGTGAGGCCGCCTGTGCGCGTTGCGCGGCGGCCCTGGCGGGTCCCCCAGTTCTCGCCGCTCCGGG TCCCACGGCCAGCCCGGGGCGGCGAGGCCACCATCCAGCCAGCCACTCCCAGTGGCCCGGCCGGCCACGTGGTCCCTCGT TACAGCCGGCGCTCCGGCCGGCGATGCCCCCCGCCTTCGCGGCGGCCTCGTACGCCGGTGCCGCCCGGGTCCTTCTGCTC TCCTATAAGGAGCGTGGGCGGGTCGACCTCGCTCCCGTGCTGGGCCAGGCGCTCGCGCGGGCGGTGGCGGTCGCGCTGGT GGCGGTCGCACCCGGCGGTAGCCGGCCCCCACCGGTGCTCCTCGTCCCGGTCCCGACGACGGCCGCGGCGCGGCGGCGCC GAGGGGTCGACCACGTCGCCCGGCTCGCGGCGGTCGCCGCCCGGTCCCTCGCCCACCGCGGGCTCCGGGCGCGGGTAAGC GCGGCGCTGCGGGTGTCGCGGCCCGGAGCCGACCAGGCCGGCCTCGGGGCGGCGGCACGGTCACGCAACCGTTCGGGGGC GTTCGCGCTGCGCACCGGCGTGCCTTCGCCGCGTCCCGGGGAGATCACGGTCGTCGTGGACGACATCGTCACCACCGGTG CGACTGTCCGGGAGGCGGTGCGCGCGCTGCGCGCGGGCGGCTGGGCGCCGGCGGCCGGCGCGGCGGTGGCCGCCACACCG CTCCAGCACGGGCGCGACGCGCCATCCTTCGGGATTGCCCGCCGCCCGGGCGGTGGAAGGGGGACACTGGGCGCGAGCGC TCCGCCCCCGGAGCCGACGGCGACAAGCTGA
Upstream 100 bases:
>100_bases CCCGGCGACGGGCCACCGCCGTGCCGGGCGGACGCGCAGGTCTGGCAGACGGGCCGGTCCGGATGCGCCGGGCGTCGTCG ATGTGCGCCGGGTGCCGCTG
Downstream 100 bases:
>100_bases TGCCGGCAATGACCGTCACTGCTCGGCGCGGTGCCGTCGTCCTGGACGAGGTCGGCGTGCGGCCCACCGTCGCGACGCGA CGGATGCGGCGCACGGCCCC
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MPAWPVRRSGQFMAPCRVLLWPGPARVVHSRRVRCCLSTTRVRRWRSRSITGHSRPVTRFPHLAEALTILADLVLPRTCA GCGRPGEAACARCAAALAGPPVLAAPGPTASPGRRGHHPASHSQWPGRPRGPSLQPALRPAMPPAFAAASYAGAARVLLL SYKERGRVDLAPVLGQALARAVAVALVAVAPGGSRPPPVLLVPVPTTAAARRRRGVDHVARLAAVAARSLAHRGLRARVS AALRVSRPGADQAGLGAAARSRNRSGAFALRTGVPSPRPGEITVVVDDIVTTGATVREAVRALRAGGWAPAAGAAVAATP LQHGRDAPSFGIARRPGGGRGTLGASAPPPEPTATS
Sequences:
>Translated_356_residues MPAWPVRRSGQFMAPCRVLLWPGPARVVHSRRVRCCLSTTRVRRWRSRSITGHSRPVTRFPHLAEALTILADLVLPRTCA GCGRPGEAACARCAAALAGPPVLAAPGPTASPGRRGHHPASHSQWPGRPRGPSLQPALRPAMPPAFAAASYAGAARVLLL SYKERGRVDLAPVLGQALARAVAVALVAVAPGGSRPPPVLLVPVPTTAAARRRRGVDHVARLAAVAARSLAHRGLRARVS AALRVSRPGADQAGLGAAARSRNRSGAFALRTGVPSPRPGEITVVVDDIVTTGATVREAVRALRAGGWAPAAGAAVAATP LQHGRDAPSFGIARRPGGGRGTLGASAPPPEPTATS >Mature_355_residues PAWPVRRSGQFMAPCRVLLWPGPARVVHSRRVRCCLSTTRVRRWRSRSITGHSRPVTRFPHLAEALTILADLVLPRTCAG CGRPGEAACARCAAALAGPPVLAAPGPTASPGRRGHHPASHSQWPGRPRGPSLQPALRPAMPPAFAAASYAGAARVLLLS YKERGRVDLAPVLGQALARAVAVALVAVAPGGSRPPPVLLVPVPTTAAARRRRGVDHVARLAAVAARSLAHRGLRARVSA ALRVSRPGADQAGLGAAARSRNRSGAFALRTGVPSPRPGEITVVVDDIVTTGATVREAVRALRAGGWAPAAGAAVAATPL QHGRDAPSFGIARRPGGGRGTLGASAPPPEPTATS
Specific function: Unknown
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36642; Mature: 36511
Theoretical pI: Translated: 12.57; Mature: 12.57
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAWPVRRSGQFMAPCRVLLWPGPARVVHSRRVRCCLSTTRVRRWRSRSITGHSRPVTRF CCCCCCCCCCCEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH PHLAEALTILADLVLPRTCAGCGRPGEAACARCAAALAGPPVLAAPGPTASPGRRGHHPA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCC SHSQWPGRPRGPSLQPALRPAMPPAFAAASYAGAARVLLLSYKERGRVDLAPVLGQALAR CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHEEEEEHHCCCCEEHHHHHHHHHHH AVAVALVAVAPGGSRPPPVLLVPVPTTAAARRRRGVDHVARLAAVAARSLAHRGLRARVS HHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AALRVSRPGADQAGLGAAARSRNRSGAFALRTGVPSPRPGEITVVVDDIVTTGATVREAV HHHHCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCEEEEEEHHHHHCCHHHHHHH RALRAGGWAPAAGAAVAATPLQHGRDAPSFGIARRPGGGRGTLGASAPPPEPTATS HHHHCCCCCCCCCCHHHHCCHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAWPVRRSGQFMAPCRVLLWPGPARVVHSRRVRCCLSTTRVRRWRSRSITGHSRPVTRF CCCCCCCCCCEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH PHLAEALTILADLVLPRTCAGCGRPGEAACARCAAALAGPPVLAAPGPTASPGRRGHHPA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCC SHSQWPGRPRGPSLQPALRPAMPPAFAAASYAGAARVLLLSYKERGRVDLAPVLGQALAR CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHEEEEEHHCCCCEEHHHHHHHHHHH AVAVALVAVAPGGSRPPPVLLVPVPTTAAARRRRGVDHVARLAAVAARSLAHRGLRARVS HHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AALRVSRPGADQAGLGAAARSRNRSGAFALRTGVPSPRPGEITVVVDDIVTTGATVREAV HHHHCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCEEEEEEHHHHHCCHHHHHHH RALRAGGWAPAAGAAVAATPLQHGRDAPSFGIARRPGGGRGTLGASAPPPEPTATS HHHHCCCCCCCCCCHHHHCCHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA