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The map label for this gene is yhbH [C]

Identifier: 158317585

GI number: 158317585

Start: 7085950

End: 7086729

Strand: Reverse

Name: yhbH [C]

Synonym: Franean1_5841

Alternate gene names: 158317585

Gene position: 7086729-7085950 (Counterclockwise)

Preceding gene: 158317586

Following gene: 158317584

Centisome position: 78.9

GC content: 71.54

Gene sequence:

>780_bases
GTGGACATCGTGGTCAAGGGCAGGCACACCGCGGTTCCGGAACGGTTCCGCAGGCATGTCCAGGCCAAACTCGCGAAGCT
CGAGCGGCTCGACTCCAAGGTCATGCTGGTCGACGTCGAACTCTCCAAGGAACACAACCCTCGGCTGTCGGACACCTGCG
ACCGTGTCGAGCTCACCGTGTATTCGCGGGGCCCGGTGATCCGTGCGGAGGCCGCCGCGGCCGACGCCTACGCCGCGCTC
GATCGCGCTACCGCCAAGCTGGCGGAGCGCCTGCGCCGCGCTTCGGACCGGCGGGTCCGCCACCACGCCAACCACGCGGG
TGCGAACCACCCGGTTCCCGGCCGGGCGGGTGCCGTCCCGGACATCCCCGTCGTCCCGACCGGCCGCCAGCCGGAGACGG
ACACCGCCGGTCCGCCGGTCCCGGGCGCCGAGGACGGCGCGGCGGGCCTCGCCGCCGTCGGATCCGAGACCCGCGCGAAG
CGGCCGAGCTGGTCGACGGCCGACGACGGCGACGGCGACGGCGACGATTCCGACTACTCGCCGATGGTGGTACGCGAGAA
GACCCACGCGGCCGCGCCCATGACGCTCGACGACGCCCTGTCGAACATGGAGCTCGTGGGGCACGACTTCTACCTTTTCC
TCGATGCCGCTAGCGGCCTGCCCAGCGTCGTGTACCGCCGATGCGGCTACGACTACGGCGTCATCCGGCTCGAGGGAGCG
GCCGGAGACAGCATGATCGGCGCCCGGGAACGAACGGCGGCGGTCATTTCCGCCGTGTGA

Upstream 100 bases:

>100_bases
CGAGGTCAGCCATCGACGGCCGCCCGAGGTACCGACTCGCCGGTCGCGTCGATCCCCCACGGATCGGCCGACCGGGCCAG
GTGAACGGGAGGTGGATCGC

Downstream 100 bases:

>100_bases
CGGTCGATCCCCCCTGCCGGCGTGGGACCATTTGCCTTGGGTGTCGGACTCCCGGCATCGGTGCACACGGCACGTTCCAC
GGGTTGTGCCCCCGGCGTCG

Product: sigma 54 modulation protein/30S ribosomal protein S30EA

Products: NA

Alternate protein names: S30AE Family Protein; SSU Ribosomal Modulation Protein; Ribosome-Associated Factor Y; Ribosome-Associated Protein; Ribosome-Associated Protein Y; 30S Ribosomal EA; Ribosome-Associated Factor; Light Repressed Protein; Ribosome-Associated Inhibitor Protein Y; Ribosome-Associated Protein Y-Like Protein; Sigma-54 Modulation Protein; 30S Ribosomal Modulation Protein

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MDIVVKGRHTAVPERFRRHVQAKLAKLERLDSKVMLVDVELSKEHNPRLSDTCDRVELTVYSRGPVIRAEAAAADAYAAL
DRATAKLAERLRRASDRRVRHHANHAGANHPVPGRAGAVPDIPVVPTGRQPETDTAGPPVPGAEDGAAGLAAVGSETRAK
RPSWSTADDGDGDGDDSDYSPMVVREKTHAAAPMTLDDALSNMELVGHDFYLFLDAASGLPSVVYRRCGYDYGVIRLEGA
AGDSMIGARERTAAVISAV

Sequences:

>Translated_259_residues
MDIVVKGRHTAVPERFRRHVQAKLAKLERLDSKVMLVDVELSKEHNPRLSDTCDRVELTVYSRGPVIRAEAAAADAYAAL
DRATAKLAERLRRASDRRVRHHANHAGANHPVPGRAGAVPDIPVVPTGRQPETDTAGPPVPGAEDGAAGLAAVGSETRAK
RPSWSTADDGDGDGDDSDYSPMVVREKTHAAAPMTLDDALSNMELVGHDFYLFLDAASGLPSVVYRRCGYDYGVIRLEGA
AGDSMIGARERTAAVISAV
>Mature_259_residues
MDIVVKGRHTAVPERFRRHVQAKLAKLERLDSKVMLVDVELSKEHNPRLSDTCDRVELTVYSRGPVIRAEAAAADAYAAL
DRATAKLAERLRRASDRRVRHHANHAGANHPVPGRAGAVPDIPVVPTGRQPETDTAGPPVPGAEDGAAGLAAVGSETRAK
RPSWSTADDGDGDGDDSDYSPMVVREKTHAAAPMTLDDALSNMELVGHDFYLFLDAASGLPSVVYRRCGYDYGVIRLEGA
AGDSMIGARERTAAVISAV

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27693; Mature: 27693

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIVVKGRHTAVPERFRRHVQAKLAKLERLDSKVMLVDVELSKEHNPRLSDTCDRVELTV
CCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEEE
YSRGPVIRAEAAAADAYAALDRATAKLAERLRRASDRRVRHHANHAGANHPVPGRAGAVP
ECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DIPVVPTGRQPETDTAGPPVPGAEDGAAGLAAVGSETRAKRPSWSTADDGDGDGDDSDYS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCC
PMVVREKTHAAAPMTLDDALSNMELVGHDFYLFLDAASGLPSVVYRRCGYDYGVIRLEGA
CEEEECCCCCCCCCCHHHHHHCCEECCCCEEEEEECCCCCHHHHHHHCCCCCCEEEEECC
AGDSMIGARERTAAVISAV
CCCCHHCCHHHHHHHHHCC
>Mature Secondary Structure
MDIVVKGRHTAVPERFRRHVQAKLAKLERLDSKVMLVDVELSKEHNPRLSDTCDRVELTV
CCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEEE
YSRGPVIRAEAAAADAYAALDRATAKLAERLRRASDRRVRHHANHAGANHPVPGRAGAVP
ECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DIPVVPTGRQPETDTAGPPVPGAEDGAAGLAAVGSETRAKRPSWSTADDGDGDGDDSDYS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCC
PMVVREKTHAAAPMTLDDALSNMELVGHDFYLFLDAASGLPSVVYRRCGYDYGVIRLEGA
CEEEECCCCCCCCCCHHHHHHCCEECCCCEEEEEECCCCCHHHHHHHCCCCCCEEEEECC
AGDSMIGARERTAAVISAV
CCCCHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA