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The map label for this gene is yxjL [H]

Identifier: 158317584

GI number: 158317584

Start: 7085087

End: 7085800

Strand: Reverse

Name: yxjL [H]

Synonym: Franean1_5840

Alternate gene names: 158317584

Gene position: 7085800-7085087 (Counterclockwise)

Preceding gene: 158317585

Following gene: 158317582

Centisome position: 78.89

GC content: 64.85

Gene sequence:

>714_bases
ATGACGGTGGACGAGCAGCGTTCCGAGGAGGCGCTGCGTACGCCATCGGAGGCGAATCCCATCCGGGTGCTCATCGTTGA
CGACCATGCCCTGTTCCGGCGCGGCCTGGAGATGGTCCTGGCGCAGGAGGTCGACATCGAGGTCGTCGGTGAGGCCGCCG
ACGGGGCGGAGGCGGTCACGATGGCCGCCGAGATGGCGCCGGACATCGTCCTGATGGATGTCCGCATGCCCAGGCGCGGT
GGGATCGACGCCACGAGCGCCATCAAGGAGAAGGTGCCCAGCGCGAAGATCGTGATGCTCACGATAAGTGACGAGGAAGC
CGACCTCTTTGACGCCATCAAGGCCGGCGCCATGGGCTACCTCCTCAAGGAGATCTCGATCGACGAGGTCGCCGCGGACA
TTCGGGCGGTCTACAACGGCCAGAGCCTCATCAGCCCGTCCATGGCCTCCAAGCTGCTCAGCGAGTTCGCGGCCATGATC
AAGACGAAGGACGACCGCCCGCAGCTCCCGACACCGCGGCTGACCGACCGGGAGATGGAGGTCCTCCGCCTGGTCGCCAA
GGGGCTGAACAACCGGGACATCGCCAAGCAGCTCTACATCAGCGAGAACACGGTGAAGAACCACATCCGGAACATCCTGG
AGAAGCTCCAGCTCCACTCCCGGATGGAGGCGGTGGTGTACGCGGTGCGGGAGAAGTTGCTCGAGATCACCTGA

Upstream 100 bases:

>100_bases
TCCCGGCATCGGTGCACACGGCACGTTCCACGGGTTGTGCCCCCGGCGTCGCGACGCCGGGGGCACAACCCCGCGGGAGC
GGTTCCAGGGGAGGTCGGAG

Downstream 100 bases:

>100_bases
CGGCCTCGCGCCCGGCGGGCCCGCGGTGTCCGCCGAGCCGCGCGGCGGCGGTCAGCCGGGCCCGTTGGCGAGCCGCAGGG
CGGCGGTCAGACGGGCGGGT

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTVDEQRSEEALRTPSEANPIRVLIVDDHALFRRGLEMVLAQEVDIEVVGEAADGAEAVTMAAEMAPDIVLMDVRMPRRG
GIDATSAIKEKVPSAKIVMLTISDEEADLFDAIKAGAMGYLLKEISIDEVAADIRAVYNGQSLISPSMASKLLSEFAAMI
KTKDDRPQLPTPRLTDREMEVLRLVAKGLNNRDIAKQLYISENTVKNHIRNILEKLQLHSRMEAVVYAVREKLLEIT

Sequences:

>Translated_237_residues
MTVDEQRSEEALRTPSEANPIRVLIVDDHALFRRGLEMVLAQEVDIEVVGEAADGAEAVTMAAEMAPDIVLMDVRMPRRG
GIDATSAIKEKVPSAKIVMLTISDEEADLFDAIKAGAMGYLLKEISIDEVAADIRAVYNGQSLISPSMASKLLSEFAAMI
KTKDDRPQLPTPRLTDREMEVLRLVAKGLNNRDIAKQLYISENTVKNHIRNILEKLQLHSRMEAVVYAVREKLLEIT
>Mature_236_residues
TVDEQRSEEALRTPSEANPIRVLIVDDHALFRRGLEMVLAQEVDIEVVGEAADGAEAVTMAAEMAPDIVLMDVRMPRRGG
IDATSAIKEKVPSAKIVMLTISDEEADLFDAIKAGAMGYLLKEISIDEVAADIRAVYNGQSLISPSMASKLLSEFAAMIK
TKDDRPQLPTPRLTDREMEVLRLVAKGLNNRDIAKQLYISENTVKNHIRNILEKLQLHSRMEAVVYAVREKLLEIT

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=216, Percent_Identity=39.8148148148148, Blast_Score=147, Evalue=6e-37,
Organism=Escherichia coli, GI1788222, Length=214, Percent_Identity=35.5140186915888, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1787473, Length=219, Percent_Identity=33.7899543378995, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790102, Length=203, Percent_Identity=31.0344827586207, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1788712, Length=210, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786747, Length=218, Percent_Identity=27.9816513761468, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082052, Length=106, Percent_Identity=38.6792452830189, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788546, Length=212, Percent_Identity=27.8301886792453, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1788550, Length=123, Percent_Identity=30.8943089430894, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 26283; Mature: 26152

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDEQRSEEALRTPSEANPIRVLIVDDHALFRRGLEMVLAQEVDIEVVGEAADGAEAVT
CCCCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHH
MAAEMAPDIVLMDVRMPRRGGIDATSAIKEKVPSAKIVMLTISDEEADLFDAIKAGAMGY
HHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHH
LLKEISIDEVAADIRAVYNGQSLISPSMASKLLSEFAAMIKTKDDRPQLPTPRLTDREME
HHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
VLRLVAKGLNNRDIAKQLYISENTVKNHIRNILEKLQLHSRMEAVVYAVREKLLEIT
HHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVDEQRSEEALRTPSEANPIRVLIVDDHALFRRGLEMVLAQEVDIEVVGEAADGAEAVT
CCCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHH
MAAEMAPDIVLMDVRMPRRGGIDATSAIKEKVPSAKIVMLTISDEEADLFDAIKAGAMGY
HHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHH
LLKEISIDEVAADIRAVYNGQSLISPSMASKLLSEFAAMIKTKDDRPQLPTPRLTDREME
HHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
VLRLVAKGLNNRDIAKQLYISENTVKNHIRNILEKLQLHSRMEAVVYAVREKLLEIT
HHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]