| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317553
Identifier: 158317553
GI number: 158317553
Start: 7052228
End: 7052401
Strand: Direct
Name: 158317553
Synonym: Franean1_5809
Alternate gene names: NA
Gene position: 7052228-7052401 (Clockwise)
Preceding gene: 158317552
Following gene: 158317555
Centisome position: 78.51
GC content: 69.54
Gene sequence:
>174_bases GTGCTGGCCCTGATGGCACGCGGGCACTCCAACACCGCCATCGCCGCCGACCTCTACCTCGCGGTGAAGACGGTCGAGGC CCACGTGACCTCGATCTTCACGAAGCTGGACCTGACGCCGGGCGACCGCGAACGCCGACGCGTGCTCGCCGTCCTACGCT TCCTGCGCGCCTAG
Upstream 100 bases:
>100_bases TGACCGCTCGTGAACACGAGGTCCTCAGCGCCATGGCGACCGGTCAGAACAACGCCGCCATCGCGCGGACGCTGTTCCTG TCCGAGCGTGCCATCGAGAA
Downstream 100 bases:
>100_bases GTCCCGCGCCAGTCAGGCGTCCCCACATCCGTCCAGCCGGTACAGCGGCACCCCGCGAACCCGTAGACCGTTGATCTCGC AGTTGTCGGCCATGCCGTTG
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Two-Component System Response Regulator
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MLALMARGHSNTAIAADLYLAVKTVEAHVTSIFTKLDLTPGDRERRRVLAVLRFLRA
Sequences:
>Translated_57_residues MLALMARGHSNTAIAADLYLAVKTVEAHVTSIFTKLDLTPGDRERRRVLAVLRFLRA >Mature_57_residues MLALMARGHSNTAIAADLYLAVKTVEAHVTSIFTKLDLTPGDRERRRVLAVLRFLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6351; Mature: 6351
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALMARGHSNTAIAADLYLAVKTVEAHVTSIFTKLDLTPGDRERRRVLAVLRFLRA CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLALMARGHSNTAIAADLYLAVKTVEAHVTSIFTKLDLTPGDRERRRVLAVLRFLRA CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA