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The map label for this gene is nreC [H]

Identifier: 158317552

GI number: 158317552

Start: 7051800

End: 7052240

Strand: Direct

Name: nreC [H]

Synonym: Franean1_5808

Alternate gene names: 158317552

Gene position: 7051800-7052240 (Clockwise)

Preceding gene: 158317550

Following gene: 158317553

Centisome position: 78.51

GC content: 68.03

Gene sequence:

>441_bases
TTGCGGGACGGAAAACGTCGGCCGAGCCGACATCCGGATGCCGCCGACGAACACCATGGAAGGCATCTCGGCCGCGAAGC
GCATCCGAGCCGAGCACCCCGGCGTCGGGTGGTCGTCCTGTCGCAGTACGTCGAACACGAGTACGCCTACGAACTGTTGC
GCGACGGCGTCGCCGGACTCGGGTACCTGCTGAAGGAGCGGGTCGTCGAGGTCGACGAACTGGTGCGCGCCCTTCGCGAG
GTCGCCCGCGGCGGGTCGGTGCTGGACCCGAAGGTCGTGAAGGGCCTGCTGGCCCACACCACTCGCGAGAAGGGACCGCT
CGCCACGTTGACCGCTCGTGAACACGAGGTCCTCAGCGCCATGGCGACCGGTCAGAACAACGCCGCCATCGCGCGGACGC
TGTTCCTGTCCGAGCGTGCCATCGAGAAGTGCTGGCCCTGA

Upstream 100 bases:

>100_bases
ACCCCTCGGTGGCCTCGGCCACGGAGGCCGCCGTGACCCGGAACGGTTCCTGGTCGTCGACGACGATCACATGAACGGCC
ATGCGTCGCCCTTCCGGTCG

Downstream 100 bases:

>100_bases
TGGCACGCGGGCACTCCAACACCGCCATCGCCGCCGACCTCTACCTCGCGGTGAAGACGGTCGAGGCCCACGTGACCTCG
ATCTTCACGAAGCTGGACCT

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: Nitrogen regulation protein C [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MRDGKRRPSRHPDAADEHHGRHLGREAHPSRAPRRRVVVLSQYVEHEYAYELLRDGVAGLGYLLKERVVEVDELVRALRE
VARGGSVLDPKVVKGLLAHTTREKGPLATLTAREHEVLSAMATGQNNAAIARTLFLSERAIEKCWP

Sequences:

>Translated_146_residues
MRDGKRRPSRHPDAADEHHGRHLGREAHPSRAPRRRVVVLSQYVEHEYAYELLRDGVAGLGYLLKERVVEVDELVRALRE
VARGGSVLDPKVVKGLLAHTTREKGPLATLTAREHEVLSAMATGQNNAAIARTLFLSERAIEKCWP
>Mature_146_residues
MRDGKRRPSRHPDAADEHHGRHLGREAHPSRAPRRRVVVLSQYVEHEYAYELLRDGVAGLGYLLKERVVEVDELVRALRE
VARGGSVLDPKVVKGLLAHTTREKGPLATLTAREHEVLSAMATGQNNAAIARTLFLSERAIEKCWP

Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. Phosphorylated nreC binds to a GC-rich palindromic sequence at the promoters of the nitrate (narGHJI) and nit

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 16369; Mature: 16369

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDGKRRPSRHPDAADEHHGRHLGREAHPSRAPRRRVVVLSQYVEHEYAYELLRDGVAGL
CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLLKERVVEVDELVRALREVARGGSVLDPKVVKGLLAHTTREKGPLATLTAREHEVLSA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
MATGQNNAAIARTLFLSERAIEKCWP
HHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRDGKRRPSRHPDAADEHHGRHLGREAHPSRAPRRRVVVLSQYVEHEYAYELLRDGVAGL
CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLLKERVVEVDELVRALREVARGGSVLDPKVVKGLLAHTTREKGPLATLTAREHEVLSA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
MATGQNNAAIARTLFLSERAIEKCWP
HHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12426351 [H]