| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317533
Identifier: 158317533
GI number: 158317533
Start: 7032077
End: 7033540
Strand: Reverse
Name: 158317533
Synonym: Franean1_5789
Alternate gene names: NA
Gene position: 7033540-7032077 (Counterclockwise)
Preceding gene: 158317534
Following gene: 158317531
Centisome position: 78.31
GC content: 77.73
Gene sequence:
>1464_bases GTGTCTGACCGACCCGCGGCGCCGGACCACGACGGCGAACAGGCGGCCCGTCCGCTCGCCACCTTCGACGCGCTGCTGAC CCCCACGGGAGCGGACCTGCTCGCCGCGGCGGCCGCGGCGCATGCCGACGGCACGGAGCTGCGCGCCGGTTCCCGGCTGC GCGCCGCCGGCCATCCCCCCGACCTCGTCGCCGCCGCGTTCGCCCAGGCCGAGCTGCGGGCCCGGGCCGCGGCGAAGTTC AGCCAGGCCGAGCGGATGTTCTTCACCCGCGCCGGGCTGGAGCAGGCCTCGTCCGAACGGGCCGCGGCGCACCGGGCGGC GAGGTTCGCCGGCCTGGGCCGCCTCGCCGACCTGTGCACCGGCATCGGCGGTGACCTCCGCGCCCTGGCGGCCGAGCACC CGGTCCTCGCCGTCGACCGCGACCCACTGCACCTGCGGATGGCCGTCCACAACGCGCACGCGCTCCGGGGCGGCGGGCGG GAGGGCGGGTCCGGTGGGGTCGAGGCCCTTGCGGCGGACGTCCGGGATGTCAGCCTGACGGGCGTCGACGGCGTCTTCGT CGATCCCGCGCGGCGGGGCGGCGAGCGGCGGATGTCCGCCGGCGCCGGTGAGCCCCCGCTGGCCTGGTGCTTCGGGCTGA CCGAGCGGGTCGAGGCCGTCGCGGTCAAGGCGGCTCCGGGGCTCCCGGTGGAGCTCGTCCCGCCAGGCTGGGAGATCGAG TTCGTCGCGGACAGACGTGGCCTCAAGGAGTCCGTGCTGTTCTCGCCCGCGCTCGCGACGGCGTCCCGGCGGGCGACGGT GCTGCTCGGCCCGGGTGACCGGTCGGTGCCCGGGACCACCGGGCCACGGGTGGTGACGCTGACCGGTGAGCCGGACCCCG TCGGTGACGACCGCGACCACGGCCGCCCGGGCGGCGGTCACAGCGGCGGTGGCGGGCCCGTCCCGCTCCCGGTCCGGCCG CCGGGGGAGTACCTCTTCGACCCCAATCCCGCCGTCACCCGGGCCGGGCTGGTCGGCACGCTCGGCCGCCTGGTCGGCGG GTGGCAGATCGACCCGAGGATCGCGTTTCTCGGCGCCGACCGGCCGCTGGCGACCCCGTTCGCGCGGACGCTGCGGGTCG AGGCCGAGATGGCCTTCGACGTGCGCCGGGTGGCGGCGGCCGTGCGCGAGGCCGGCATCGGCGCACTCGACGTGCGCCGG CGCGGACTCGCCGGGGATGTGGACGCCATCCGGCGGCGGCTGATGCCGGCCCGGCGGCACCTGGTCCCGGGGGGCCGCAC CATGACGGTGGTGATGACCCGGGTGCGGGACGAGCCGTGGGCTCTTCTGTGTACCGACATCACGCAGGCCGATCGGGCGG ATCAAGCCGATCGGGCTGATGCGGCGGATCGGGCCGGGCGGGCGGATCCGCCGGATCTGGCGGACCGGACGGCGGGGGCC CGGGGCGGTCCGGCCAGGGACTGA
Upstream 100 bases:
>100_bases TTGGCCCGCGGCCGCAAGAACTACGACAAGCGCCACGCCCTCGCCGAGCGGGACGCGGCGCGTGAGATGAGCCGGATCAT GGGCCGGCAGGCGAAGGGCC
Downstream 100 bases:
>100_bases ACGCGGAGCCGGCGGTGGCGAGCGCGAGGTTGAGCGCGACCAGCGTCAGCCCGGCATACAGCGACAGCAGCGGCGTCACG CGCAGGAAACCCAGCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MSDRPAAPDHDGEQAARPLATFDALLTPTGADLLAAAAAAHADGTELRAGSRLRAAGHPPDLVAAAFAQAELRARAAAKF SQAERMFFTRAGLEQASSERAAAHRAARFAGLGRLADLCTGIGGDLRALAAEHPVLAVDRDPLHLRMAVHNAHALRGGGR EGGSGGVEALAADVRDVSLTGVDGVFVDPARRGGERRMSAGAGEPPLAWCFGLTERVEAVAVKAAPGLPVELVPPGWEIE FVADRRGLKESVLFSPALATASRRATVLLGPGDRSVPGTTGPRVVTLTGEPDPVGDDRDHGRPGGGHSGGGGPVPLPVRP PGEYLFDPNPAVTRAGLVGTLGRLVGGWQIDPRIAFLGADRPLATPFARTLRVEAEMAFDVRRVAAAVREAGIGALDVRR RGLAGDVDAIRRRLMPARRHLVPGGRTMTVVMTRVRDEPWALLCTDITQADRADQADRADAADRAGRADPPDLADRTAGA RGGPARD
Sequences:
>Translated_487_residues MSDRPAAPDHDGEQAARPLATFDALLTPTGADLLAAAAAAHADGTELRAGSRLRAAGHPPDLVAAAFAQAELRARAAAKF SQAERMFFTRAGLEQASSERAAAHRAARFAGLGRLADLCTGIGGDLRALAAEHPVLAVDRDPLHLRMAVHNAHALRGGGR EGGSGGVEALAADVRDVSLTGVDGVFVDPARRGGERRMSAGAGEPPLAWCFGLTERVEAVAVKAAPGLPVELVPPGWEIE FVADRRGLKESVLFSPALATASRRATVLLGPGDRSVPGTTGPRVVTLTGEPDPVGDDRDHGRPGGGHSGGGGPVPLPVRP PGEYLFDPNPAVTRAGLVGTLGRLVGGWQIDPRIAFLGADRPLATPFARTLRVEAEMAFDVRRVAAAVREAGIGALDVRR RGLAGDVDAIRRRLMPARRHLVPGGRTMTVVMTRVRDEPWALLCTDITQADRADQADRADAADRAGRADPPDLADRTAGA RGGPARD >Mature_486_residues SDRPAAPDHDGEQAARPLATFDALLTPTGADLLAAAAAAHADGTELRAGSRLRAAGHPPDLVAAAFAQAELRARAAAKFS QAERMFFTRAGLEQASSERAAAHRAARFAGLGRLADLCTGIGGDLRALAAEHPVLAVDRDPLHLRMAVHNAHALRGGGRE GGSGGVEALAADVRDVSLTGVDGVFVDPARRGGERRMSAGAGEPPLAWCFGLTERVEAVAVKAAPGLPVELVPPGWEIEF VADRRGLKESVLFSPALATASRRATVLLGPGDRSVPGTTGPRVVTLTGEPDPVGDDRDHGRPGGGHSGGGGPVPLPVRPP GEYLFDPNPAVTRAGLVGTLGRLVGGWQIDPRIAFLGADRPLATPFARTLRVEAEMAFDVRRVAAAVREAGIGALDVRRR GLAGDVDAIRRRLMPARRHLVPGGRTMTVVMTRVRDEPWALLCTDITQADRADQADRADAADRAGRADPPDLADRTAGAR GGPARD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50729; Mature: 50598
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRPAAPDHDGEQAARPLATFDALLTPTGADLLAAAAAAHADGTELRAGSRLRAAGHPP CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH DLVAAAFAQAELRARAAAKFSQAERMFFTRAGLEQASSERAAAHRAARFAGLGRLADLCT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGGDLRALAAEHPVLAVDRDPLHLRMAVHNAHALRGGGREGGSGGVEALAADVRDVSLT CCCCHHHHHHCCCCEEEECCCCEEEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHEEEE GVDGVFVDPARRGGERRMSAGAGEPPLAWCFGLTERVEAVAVKAAPGLPVELVPPGWEIE CCCCEEECHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCEEEECCCCEEE FVADRRGLKESVLFSPALATASRRATVLLGPGDRSVPGTTGPRVVTLTGEPDPVGDDRDH EEECCCCCHHHHHHCHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCC GRPGGGHSGGGGPVPLPVRPPGEYLFDPNPAVTRAGLVGTLGRLVGGWQIDPRIAFLGAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCEEEEEECC RPLATPFARTLRVEAEMAFDVRRVAAAVREAGIGALDVRRRGLAGDVDAIRRRLMPARRH CCCCCHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH LVPGGRTMTVVMTRVRDEPWALLCTDITQADRADQADRADAADRAGRADPPDLADRTAGA CCCCCCEEEEEEEECCCCCCEEEEECCHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCC RGGPARD CCCCCCC >Mature Secondary Structure SDRPAAPDHDGEQAARPLATFDALLTPTGADLLAAAAAAHADGTELRAGSRLRAAGHPP CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH DLVAAAFAQAELRARAAAKFSQAERMFFTRAGLEQASSERAAAHRAARFAGLGRLADLCT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGGDLRALAAEHPVLAVDRDPLHLRMAVHNAHALRGGGREGGSGGVEALAADVRDVSLT CCCCHHHHHHCCCCEEEECCCCEEEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHEEEE GVDGVFVDPARRGGERRMSAGAGEPPLAWCFGLTERVEAVAVKAAPGLPVELVPPGWEIE CCCCEEECHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCEEEECCCCEEE FVADRRGLKESVLFSPALATASRRATVLLGPGDRSVPGTTGPRVVTLTGEPDPVGDDRDH EEECCCCCHHHHHHCHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCC GRPGGGHSGGGGPVPLPVRPPGEYLFDPNPAVTRAGLVGTLGRLVGGWQIDPRIAFLGAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCEEEEEECC RPLATPFARTLRVEAEMAFDVRRVAAAVREAGIGALDVRRRGLAGDVDAIRRRLMPARRH CCCCCHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH LVPGGRTMTVVMTRVRDEPWALLCTDITQADRADQADRADAADRAGRADPPDLADRTAGA CCCCCCEEEEEEEECCCCCCEEEEECCHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCC RGGPARD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA