| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317507
Identifier: 158317507
GI number: 158317507
Start: 6996793
End: 6997329
Strand: Reverse
Name: 158317507
Synonym: Franean1_5759
Alternate gene names: NA
Gene position: 6997329-6996793 (Counterclockwise)
Preceding gene: 158317508
Following gene: 158317506
Centisome position: 77.9
GC content: 70.2
Gene sequence:
>537_bases GTGGACCAAGCCAATCCCTTCGAGACTCCGACGACCTACGCGCTGCACCGCGGCGAGTACCTGGTCGGGCTCGCCGTGAC GACCGGCTTCCTCGCCGCCCACGCCGGTGACGTGCGGTGGGGCGTGGCCGTCGGGTTGTTCCTCTACATCGACGTGATCG GCTACCTGCCCGGGGCGTTGGCGTTTCGACGCAGTGGCGGCAGGCCGATCGCGAAGACCTACTACGTGCTCTACAACGTG ATGCACAGCTTGGTCACGCAGGGGGCGGTCGCCGCGCTGTGGTGCTGGCTGGTCGGGCCGGAGTGGGCACTGTTGGTGCT GCCGTTCCACCTGTTCGGCGACCGCAGCCTGTTCGGCAACTTCCTGAAGTCGTTCGCCTTGCCGTTCGAGCCGGTGCGCC AGCAGGGCTACCTGCGGCTGCTCGACGACCTCCGGTTGGCGCACCCGAAGCCCCTGGGGCACGCGGGCGACGGCCCGGTG CCCGTCGGTCACCTCGCCGCCGTCCCGCCCCGGCGGCAGTCCGAGGCGATCCCGTGA
Upstream 100 bases:
>100_bases CGAGATCAGCGGCGACTTCGACCTGGACGGGTCGACTGTCCCCGCGCCGGCGTGACGGCCGCGCGTCACGCGCCCAGGCG AACAAGGCAGGAGACGAACT
Downstream 100 bases:
>100_bases GCATTGAGGCGGCCAGGTCGTCGCGGCGAGCCGCGCTGCGCCACCTGGCCGCGCCGGTGGCCGTACTGACCGTGTGCCAC GAGGGGAGTTCGCACGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MDQANPFETPTTYALHRGEYLVGLAVTTGFLAAHAGDVRWGVAVGLFLYIDVIGYLPGALAFRRSGGRPIAKTYYVLYNV MHSLVTQGAVAALWCWLVGPEWALLVLPFHLFGDRSLFGNFLKSFALPFEPVRQQGYLRLLDDLRLAHPKPLGHAGDGPV PVGHLAAVPPRRQSEAIP
Sequences:
>Translated_178_residues MDQANPFETPTTYALHRGEYLVGLAVTTGFLAAHAGDVRWGVAVGLFLYIDVIGYLPGALAFRRSGGRPIAKTYYVLYNV MHSLVTQGAVAALWCWLVGPEWALLVLPFHLFGDRSLFGNFLKSFALPFEPVRQQGYLRLLDDLRLAHPKPLGHAGDGPV PVGHLAAVPPRRQSEAIP >Mature_178_residues MDQANPFETPTTYALHRGEYLVGLAVTTGFLAAHAGDVRWGVAVGLFLYIDVIGYLPGALAFRRSGGRPIAKTYYVLYNV MHSLVTQGAVAALWCWLVGPEWALLVLPFHLFGDRSLFGNFLKSFALPFEPVRQQGYLRLLDDLRLAHPKPLGHAGDGPV PVGHLAAVPPRRQSEAIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19489; Mature: 19489
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQANPFETPTTYALHRGEYLVGLAVTTGFLAAHAGDVRWGVAVGLFLYIDVIGYLPGAL CCCCCCCCCCCCEEEECCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AFRRSGGRPIAKTYYVLYNVMHSLVTQGAVAALWCWLVGPEWALLVLPFHLFGDRSLFGN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHH FLKSFALPFEPVRQQGYLRLLDDLRLAHPKPLGHAGDGPVPVGHLAAVPPRRQSEAIP HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDQANPFETPTTYALHRGEYLVGLAVTTGFLAAHAGDVRWGVAVGLFLYIDVIGYLPGAL CCCCCCCCCCCCEEEECCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AFRRSGGRPIAKTYYVLYNVMHSLVTQGAVAALWCWLVGPEWALLVLPFHLFGDRSLFGN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHH FLKSFALPFEPVRQQGYLRLLDDLRLAHPKPLGHAGDGPVPVGHLAAVPPRRQSEAIP HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA