| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317508
Identifier: 158317508
GI number: 158317508
Start: 6997375
End: 6997860
Strand: Reverse
Name: 158317508
Synonym: Franean1_5760
Alternate gene names: NA
Gene position: 6997860-6997375 (Counterclockwise)
Preceding gene: 158317509
Following gene: 158317507
Centisome position: 77.91
GC content: 69.96
Gene sequence:
>486_bases GTGAGGCACGTAGAACTCGACGCCGTGGTGCGCGGCGCGCTCGCCACCGACGTCTTCGACGAGGTCCTGCGGTGGGAGCG TTACCCCGATCTCGCGCCGCACGTGCGCGCGACGACGGTGCACGCCACCCTGCCCGCCCCGGACTGCAGCTCGAGCTGGG AACTGCACTTCCGCAGCGGCCTGCTCCGCTGGACCGAGTCGGACGGCTTCCACCGCGACGACCTGACGATCCGCTTCGAG CAGACCGACGGGGACTTCGACACCTTCAGCGGCTCCTGGCAGCTCGCGCAAGCCGGCGACGACGTCACGGTCCACTTCGA GGCCGACTTCGACTTCGGCATCCCCAGCCTCGAGGGAATCCTCGACCCGATCGCGGAGCGGGTGATCAGGGAGACGGTCG CCTGGGCGGTGACCGGGATGTTCCCCACCACCGAGATCAGCGGCGACTTCGACCTGGACGGGTCGACTGTCCCCGCGCCG GCGTGA
Upstream 100 bases:
>100_bases TGACCGACCGCGACGTGGAGTTCTTGCTCGCATCCTTCGACAAGGCCACCCGAGCGCTGGTCAGCGGCTCGGCCACCATG CCTGGAAGGCGGAGCCGATC
Downstream 100 bases:
>100_bases CGGCCGCGCGTCACGCGCCCAGGCGAACAAGGCAGGAGACGAACTGTGGACCAAGCCAATCCCTTCGAGACTCCGACGAC CTACGCGCTGCACCGCGGCG
Product: cyclase/dehydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRHVELDAVVRGALATDVFDEVLRWERYPDLAPHVRATTVHATLPAPDCSSSWELHFRSGLLRWTESDGFHRDDLTIRFE QTDGDFDTFSGSWQLAQAGDDVTVHFEADFDFGIPSLEGILDPIAERVIRETVAWAVTGMFPTTEISGDFDLDGSTVPAP A
Sequences:
>Translated_161_residues MRHVELDAVVRGALATDVFDEVLRWERYPDLAPHVRATTVHATLPAPDCSSSWELHFRSGLLRWTESDGFHRDDLTIRFE QTDGDFDTFSGSWQLAQAGDDVTVHFEADFDFGIPSLEGILDPIAERVIRETVAWAVTGMFPTTEISGDFDLDGSTVPAP A >Mature_161_residues MRHVELDAVVRGALATDVFDEVLRWERYPDLAPHVRATTVHATLPAPDCSSSWELHFRSGLLRWTESDGFHRDDLTIRFE QTDGDFDTFSGSWQLAQAGDDVTVHFEADFDFGIPSLEGILDPIAERVIRETVAWAVTGMFPTTEISGDFDLDGSTVPAP A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17922; Mature: 17922
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVELDAVVRGALATDVFDEVLRWERYPDLAPHVRATTVHATLPAPDCSSSWELHFRSG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCC LLRWTESDGFHRDDLTIRFEQTDGDFDTFSGSWQLAQAGDDVTVHFEADFDFGIPSLEGI EEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHH LDPIAERVIRETVAWAVTGMFPTTEISGDFDLDGSTVPAPA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHVELDAVVRGALATDVFDEVLRWERYPDLAPHVRATTVHATLPAPDCSSSWELHFRSG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCC LLRWTESDGFHRDDLTIRFEQTDGDFDTFSGSWQLAQAGDDVTVHFEADFDFGIPSLEGI EEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHH LDPIAERVIRETVAWAVTGMFPTTEISGDFDLDGSTVPAPA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA