| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317493
Identifier: 158317493
GI number: 158317493
Start: 6981271
End: 6981477
Strand: Direct
Name: 158317493
Synonym: Franean1_5745
Alternate gene names: NA
Gene position: 6981271-6981477 (Clockwise)
Preceding gene: 158317492
Following gene: 158317494
Centisome position: 77.72
GC content: 68.6
Gene sequence:
>207_bases ATGAGCACGACCACCTACACCGTCACGGGCATGACCTGCGCGCACTGCGTCGCCTCAGTCACCGAGGAACTCGGCGAGAT CGTCGGCGTCACCAACGTGGCCGTGGACCTGGGCTCCGGCGCGGTCACCGTGACCAGCGACCGGCAGCTCGATCCGGCCA CGGTGCGTACCGCAGTCGAGGAAGCCGGCTACCAGCTCGTCGGCTGA
Upstream 100 bases:
>100_bases ACCCCCCAGGGGTATGTTCAGTTACGTCGAGTTGGCCGCTGCCAGTACACGCGGCCCGTCGAGTACCGGCGCATCACCAG ACTCCAAGAGAGGACCTCCG
Downstream 100 bases:
>100_bases CGTCCACACCCCTGCGGGACGCGGCCCACAGCGAAACCCGCAAGAACGAACGGTGCGAAATGAATACGATTACGAAGCTG TCCGCCTTCGGCGCAGCGCT
Product: heavy metal transport/detoxification protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MSTTTYTVTGMTCAHCVASVTEELGEIVGVTNVAVDLGSGAVTVTSDRQLDPATVRTAVEEAGYQLVG
Sequences:
>Translated_68_residues MSTTTYTVTGMTCAHCVASVTEELGEIVGVTNVAVDLGSGAVTVTSDRQLDPATVRTAVEEAGYQLVG >Mature_67_residues STTTYTVTGMTCAHCVASVTEELGEIVGVTNVAVDLGSGAVTVTSDRQLDPATVRTAVEEAGYQLVG
Specific function: Unknown
COG id: COG2608
COG function: function code P; Copper chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6935; Mature: 6804
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: PS01047 HMA_1 ; PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTTYTVTGMTCAHCVASVTEELGEIVGVTNVAVDLGSGAVTVTSDRQLDPATVRTAVE CCCCEEEECCCHHHHHHHHHHHHHHHHHCHHHHEEECCCCEEEECCCCCCCHHHHHHHHH EAGYQLVG HCCEEECC >Mature Secondary Structure STTTYTVTGMTCAHCVASVTEELGEIVGVTNVAVDLGSGAVTVTSDRQLDPATVRTAVE CCCEEEECCCHHHHHHHHHHHHHHHHHCHHHHEEECCCCEEEECCCCCCCHHHHHHHHH EAGYQLVG HCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA