| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317494
Identifier: 158317494
GI number: 158317494
Start: 6981537
End: 6982481
Strand: Direct
Name: 158317494
Synonym: Franean1_5746
Alternate gene names: NA
Gene position: 6981537-6982481 (Clockwise)
Preceding gene: 158317493
Following gene: 158317495
Centisome position: 77.73
GC content: 70.26
Gene sequence:
>945_bases ATGAATACGATTACGAAGCTGTCCGCCTTCGGCGCAGCGCTCGCCCTGGTCGTCGGCGGCGCTTACGGCGTCGGCGCGGC GGTCGGCCCGCTGGACGCGGCCACCACCAGCCCGGAACACAGCTCCGACACCGACGGCCACGGCGGCACCGGCCCCGACG AGGCCTCGGACAACGCCTCGGACCTGCCGGGCGGGTTGGCGTCAAGCTTGAGCGGCTACGCCTTCACACCCACCGTGTCG ACCTTGACGCCGAACAACACAGACGACTTCACGTTCCGGATCACCGGGCCTGGCGGGGAAGCCGTCACCGCCTTCGACGT CGAACACGACAAGCGGATGCACCTGATCGTGGTGCGCCGCGACGGCAGCGCGTTCCAGCACCTCCATCCGACGATGGCAC CCGACGGGACCTGGTCCGTTCCCCTGTCAGTGCGCACGGCCGGTTCCTACCGGGCATTCGCGGACTTCACCCCCACCGGC GCCACGGCCACCACCCTGGGCGTCGACCTGACCGCCCCGGGCCTGTTCGAGCCGATCACCTACCCGCCGACACGCAGCGC TTCGGTGGACGGCTACGAAGTGACTCTCGCCGGCAACCTGATCGGCGGGCAGGCATCGCCGCTCACCCTGACGGTTCACA AGGACGGGCAGCCGGTGACGGACCTGGAGCCCTACCTCGGCGCCTACGGGCACCTGGTGGCGCTGCGTGAGGGCGACCTG GCCTACCTGCACGTACATCCCAACGGTGAGGACACGTCAGCCGGCCCGGACATCCCGTTCGTGGCCGACGTGCCGACCGA AGGCCGCTACCGGCTGTTCCTCGACTTCCGGCACGACGGAGTCGTCCGCACAGCGGAGTTCACGGTGCCCACCGGACCGT CCGTGCCGGACGCCGCCACGACATCGCCCGCGGCGGGGCACGCCGACGACAGTCACGGGCACTGA
Upstream 100 bases:
>100_bases GTACCGCAGTCGAGGAAGCCGGCTACCAGCTCGTCGGCTGACGTCCACACCCCTGCGGGACGCGGCCCACAGCGAAACCC GCAAGAACGAACGGTGCGAA
Downstream 100 bases:
>100_bases TCGCGAGAGGAGACATCGGCCGGCATGAGCACCACCACCACCACGACGCCGCACGCCACCGACACCCCGGTCACCGAGAT CGAGCTCGCGATCGGCGGGA
Product: secreted protein
Products: NA
Alternate protein names: Heavy Metal Translocating P-Type ATPase; LOW QUALITY PROTEIN Secreted Protein; Heavy Metal-Associated Domain-Containing Protein; Heavy Metal-Associated Domain Protein
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MNTITKLSAFGAALALVVGGAYGVGAAVGPLDAATTSPEHSSDTDGHGGTGPDEASDNASDLPGGLASSLSGYAFTPTVS TLTPNNTDDFTFRITGPGGEAVTAFDVEHDKRMHLIVVRRDGSAFQHLHPTMAPDGTWSVPLSVRTAGSYRAFADFTPTG ATATTLGVDLTAPGLFEPITYPPTRSASVDGYEVTLAGNLIGGQASPLTLTVHKDGQPVTDLEPYLGAYGHLVALREGDL AYLHVHPNGEDTSAGPDIPFVADVPTEGRYRLFLDFRHDGVVRTAEFTVPTGPSVPDAATTSPAAGHADDSHGH
Sequences:
>Translated_314_residues MNTITKLSAFGAALALVVGGAYGVGAAVGPLDAATTSPEHSSDTDGHGGTGPDEASDNASDLPGGLASSLSGYAFTPTVS TLTPNNTDDFTFRITGPGGEAVTAFDVEHDKRMHLIVVRRDGSAFQHLHPTMAPDGTWSVPLSVRTAGSYRAFADFTPTG ATATTLGVDLTAPGLFEPITYPPTRSASVDGYEVTLAGNLIGGQASPLTLTVHKDGQPVTDLEPYLGAYGHLVALREGDL AYLHVHPNGEDTSAGPDIPFVADVPTEGRYRLFLDFRHDGVVRTAEFTVPTGPSVPDAATTSPAAGHADDSHGH >Mature_314_residues MNTITKLSAFGAALALVVGGAYGVGAAVGPLDAATTSPEHSSDTDGHGGTGPDEASDNASDLPGGLASSLSGYAFTPTVS TLTPNNTDDFTFRITGPGGEAVTAFDVEHDKRMHLIVVRRDGSAFQHLHPTMAPDGTWSVPLSVRTAGSYRAFADFTPTG ATATTLGVDLTAPGLFEPITYPPTRSASVDGYEVTLAGNLIGGQASPLTLTVHKDGQPVTDLEPYLGAYGHLVALREGDL AYLHVHPNGEDTSAGPDIPFVADVPTEGRYRLFLDFRHDGVVRTAEFTVPTGPSVPDAATTSPAAGHADDSHGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32375; Mature: 32375
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTITKLSAFGAALALVVGGAYGVGAAVGPLDAATTSPEHSSDTDGHGGTGPDEASDNAS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DLPGGLASSLSGYAFTPTVSTLTPNNTDDFTFRITGPGGEAVTAFDVEHDKRMHLIVVRR CCCCHHHHHCCCEEECCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEEC DGSAFQHLHPTMAPDGTWSVPLSVRTAGSYRAFADFTPTGATATTLGVDLTAPGLFEPIT CCCHHHHCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCC YPPTRSASVDGYEVTLAGNLIGGQASPLTLTVHKDGQPVTDLEPYLGAYGHLVALREGDL CCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCHHHCCCEEEEEEECCCE AYLHVHPNGEDTSAGPDIPFVADVPTEGRYRLFLDFRHDGVVRTAEFTVPTGPSVPDAAT EEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCC TSPAAGHADDSHGH CCCCCCCCCCCCCC >Mature Secondary Structure MNTITKLSAFGAALALVVGGAYGVGAAVGPLDAATTSPEHSSDTDGHGGTGPDEASDNAS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DLPGGLASSLSGYAFTPTVSTLTPNNTDDFTFRITGPGGEAVTAFDVEHDKRMHLIVVRR CCCCHHHHHCCCEEECCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEEC DGSAFQHLHPTMAPDGTWSVPLSVRTAGSYRAFADFTPTGATATTLGVDLTAPGLFEPIT CCCHHHHCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCC YPPTRSASVDGYEVTLAGNLIGGQASPLTLTVHKDGQPVTDLEPYLGAYGHLVALREGDL CCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCHHHCCCEEEEEEECCCE AYLHVHPNGEDTSAGPDIPFVADVPTEGRYRLFLDFRHDGVVRTAEFTVPTGPSVPDAAT EEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCC TSPAAGHADDSHGH CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA