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The map label for this gene is iap [H]

Identifier: 158317484

GI number: 158317484

Start: 6970688

End: 6971668

Strand: Reverse

Name: iap [H]

Synonym: Franean1_5736

Alternate gene names: 158317484

Gene position: 6971668-6970688 (Counterclockwise)

Preceding gene: 158317487

Following gene: 158317481

Centisome position: 77.62

GC content: 65.95

Gene sequence:

>981_bases
ATGGGTGGGATACCGCTGCGTGTGTCGGCGTCGCAGCGTCGCGTAGCGACTCTTGCCCTCATGACGACCGGCGGCTTCGC
CGCCGCGTCGACTGGCTTCGCGCTCGCTACCACCGGCGAAGCTGCCTCCGCGGCATCACCGGTGCCCACCATCCGCACGG
CTGGCATCCTCCCTGCGGGCGCCCAGCCGGCTGCAGCGGACGGTGAGGAAGCGGCGCTGGCCGCCGCCATCGCTGATCCG
TCGGAGAACTTCACCGGTCTCGCATTCGCTCCCGACCGGGCGACCGTCGCGCCCAACGGCGAAGTGATGTTCACCGTCCG
TGCGACCAGGGCCGACGGCGCACCACTAATCGGGTCCGCCGTCCGCATCGTGTCCGTCAACGGACCGAAATGGACCACCA
CGGCCACACTCCGAACGGACGCCGCAGGCGAGGCGCGGATATCTACTCGACTGCTATCCACGACTACCCTCACTGCCGTG
TTTGACGGCTCCGGCGCGCTGCGTCCCTCAATGGCCGGAACAGCGACGGTCACCGTCCAGGCTCCACCCGCGGCAGCGAG
GTCCGCCCGCACCGGTGGAGGGCAGCCAGGTGCCGTACCCACACCGATCTACGGCTCGGTCCCGGCAAGCGAGATCGGCG
CGAAGGCCGTTTATCTTGCGTCCCTGCAGAACGGCAAACCGTACGTCTACGGCGCCGCAGGACCTTACGCCTTCGACTGC
TCGGGATACGCCCAGTACGTCTACCGGCAGCTTGGACGGAACCTGCCGCGTACCGCCCAGCAGCAGTTCCAGGCCACGAT
ACGTATACCGAAATCCGGGAAGCAGCCCGGGGACCTCATCTTCTTCGGCACTCCATCAAACATCACCCACATGGGCATCT
ATGCCGGAAACGGCTATATGTGGGCTGCTCCAAGGACCGGAAGCAACGTCAAGCTGCAGCCCATCTACAGCTCCACCTAC
TATGTAGGCAGAGTTCGGTAA

Upstream 100 bases:

>100_bases
GGACGTGTGGGTGGATCGCGCCAGGAGGTACGTCTACCAGGCTCGTGAGGAAACGGCACCGCTGCTGGGACGCCGTCCGC
GAGCGAGGGCCACGGAGCAG

Downstream 100 bases:

>100_bases
ATTGTGATCGCCCCTGGCCAGGAGCCTCGTGGGGACCGGGCGGACGGTGATCTCAGGACCCTGGACCAAGAGCGGACACC
GGCTCCTGGCCGCCGGGTTC

Product: NLP/P60 protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MGGIPLRVSASQRRVATLALMTTGGFAAASTGFALATTGEAASAASPVPTIRTAGILPAGAQPAAADGEEAALAAAIADP
SENFTGLAFAPDRATVAPNGEVMFTVRATRADGAPLIGSAVRIVSVNGPKWTTTATLRTDAAGEARISTRLLSTTTLTAV
FDGSGALRPSMAGTATVTVQAPPAAARSARTGGGQPGAVPTPIYGSVPASEIGAKAVYLASLQNGKPYVYGAAGPYAFDC
SGYAQYVYRQLGRNLPRTAQQQFQATIRIPKSGKQPGDLIFFGTPSNITHMGIYAGNGYMWAAPRTGSNVKLQPIYSSTY
YVGRVR

Sequences:

>Translated_326_residues
MGGIPLRVSASQRRVATLALMTTGGFAAASTGFALATTGEAASAASPVPTIRTAGILPAGAQPAAADGEEAALAAAIADP
SENFTGLAFAPDRATVAPNGEVMFTVRATRADGAPLIGSAVRIVSVNGPKWTTTATLRTDAAGEARISTRLLSTTTLTAV
FDGSGALRPSMAGTATVTVQAPPAAARSARTGGGQPGAVPTPIYGSVPASEIGAKAVYLASLQNGKPYVYGAAGPYAFDC
SGYAQYVYRQLGRNLPRTAQQQFQATIRIPKSGKQPGDLIFFGTPSNITHMGIYAGNGYMWAAPRTGSNVKLQPIYSSTY
YVGRVR
>Mature_325_residues
GGIPLRVSASQRRVATLALMTTGGFAAASTGFALATTGEAASAASPVPTIRTAGILPAGAQPAAADGEEAALAAAIADPS
ENFTGLAFAPDRATVAPNGEVMFTVRATRADGAPLIGSAVRIVSVNGPKWTTTATLRTDAAGEARISTRLLSTTTLTAVF
DGSGALRPSMAGTATVTVQAPPAAARSARTGGGQPGAVPTPIYGSVPASEIGAKAVYLASLQNGKPYVYGAAGPYAFDCS
GYAQYVYRQLGRNLPRTAQQQFQATIRIPKSGKQPGDLIFFGTPSNITHMGIYAGNGYMWAAPRTGSNVKLQPIYSSTYY
VGRVR

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=112, Percent_Identity=38.3928571428571, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1786421, Length=120, Percent_Identity=35.8333333333333, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 33278; Mature: 33147

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGIPLRVSASQRRVATLALMTTGGFAAASTGFALATTGEAASAASPVPTIRTAGILPAG
CCCCEEEEECCCCEEEEEEEEECCCCEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCC
AQPAAADGEEAALAAAIADPSENFTGLAFAPDRATVAPNGEVMFTVRATRADGAPLIGSA
CCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEECCCCCEEEEEEECCCCCCCEECCE
VRIVSVNGPKWTTTATLRTDAAGEARISTRLLSTTTLTAVFDGSGALRPSMAGTATVTVQ
EEEEEECCCCEEEEEEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEE
APPAAARSARTGGGQPGAVPTPIYGSVPASEIGAKAVYLASLQNGKPYVYGAAGPYAFDC
CCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEECCCCCEEEECCCCCEECC
SGYAQYVYRQLGRNLPRTAQQQFQATIRIPKSGKQPGDLIFFGTPSNITHMGIYAGNGYM
CHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCEE
WAAPRTGSNVKLQPIYSSTYYVGRVR
EECCCCCCCEEEEEEECCEEEEEEEC
>Mature Secondary Structure 
GGIPLRVSASQRRVATLALMTTGGFAAASTGFALATTGEAASAASPVPTIRTAGILPAG
CCCEEEEECCCCEEEEEEEEECCCCEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCC
AQPAAADGEEAALAAAIADPSENFTGLAFAPDRATVAPNGEVMFTVRATRADGAPLIGSA
CCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEECCCCCEEEEEEECCCCCCCEECCE
VRIVSVNGPKWTTTATLRTDAAGEARISTRLLSTTTLTAVFDGSGALRPSMAGTATVTVQ
EEEEEECCCCEEEEEEEEECCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEE
APPAAARSARTGGGQPGAVPTPIYGSVPASEIGAKAVYLASLQNGKPYVYGAAGPYAFDC
CCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEECCCCCEEEECCCCCEECC
SGYAQYVYRQLGRNLPRTAQQQFQATIRIPKSGKQPGDLIFFGTPSNITHMGIYAGNGYM
CHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCEE
WAAPRTGSNVKLQPIYSSTYYVGRVR
EECCCCCCCEEEEEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2111287; 1459966; 11679669 [H]