Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317473

Identifier: 158317473

GI number: 158317473

Start: 6952702

End: 6954231

Strand: Reverse

Name: 158317473

Synonym: Franean1_5725

Alternate gene names: NA

Gene position: 6954231-6952702 (Counterclockwise)

Preceding gene: 158317476

Following gene: 158317472

Centisome position: 77.42

GC content: 66.99

Gene sequence:

>1530_bases
TTGCCCAGGGTCGGTCCCATACGGAAGACGACCTCCCGGGGTTTTCCCGGGGTACCCGAGCACGGGTACCTGCATCGGCT
GACGCCGGCCGGCATGCCTGAAGCCTGGAGCGCGCGGCCGCTGTACTTCTTTTTCAGCTATGCCAGGGCGGACAGCCGTG
ACGACCCGCTGCTCGAGCGGTTCTTCCGTGATCTCAGAGCCGAGGTGCGCCGCCGGGTGGGTCATCCGGACCCGGACACC
GTTGGCTTCCTTGACCAGCGCAGCATCCAGCCGGGGGAGGCCTGGTCGACGGAGCTTGGCGCGGCACTCTGCCGGTGCAG
AACCTTCGTGGCGATGTGCTCGCCCTCGTTCTTCGCGAGTGAGCACTGCGGCCGTGAATGGGGGATGTTCGACGAGCGGC
TGCGCTCCGCCGCCGCATCGGCCCAGGCCTGTCCGGCGGCGCTGCTTCCCGTGATCTGGACGCCGTTACGCGATCCGCCG
GAGCTGCTCGCCCGGTTGCAGTATGATCACAGCGGGTTGGGGAAGACGTACACGCAGTTCGGGTTGCGGTATCTCATGCA
GCTCAAGCGCAATCATGACGAGTACCAGGAGTTCGTGCTGACATTAGCGGTTCGGATCGTCCAACTCGCTGAGGACTCGC
CGTTGGCCCCGAAGTCCGAGATCCCGCCACTCCAAGAGGTTCCCGACGCATTCCGCGTACTCGCCAGGCCACCGTTGACA
CGTGATCAGGAAGATGTGCCGCCTGAGATGCGGGCGACGGTCGTTCCCGACCCGCCGCGAGCCGACCGTGCCGAGGACGA
CGTCCCCGTGGTGGACAAGGGGCAGGGCAAGCCGCCGTCACCGGATCGGCAGACGGCGCCCGCGCCTGATCCGCCCCAGT
CCTCGACTCCGCCCCGCCCGCTCCAGGAGGCGCCGTCGCCCATCGTGGGCGGGCCGGGCCGCGTGACTTTCGTGTTCGCC
TCGACGTCGGCCGAGGAGATCGCCACGTTGCGCCGTCAGCTCGACTGTTACGGCGAGACCTTCGAGGAGTGGACGCCGTA
CAAGCCTCGTGCCCACGACCGGGTCTGCGTGATCGCCCAGATGGTTGCCGCCAGGCAGGGTCTTGTCTCGAACATCGTGC
CACTGGACCACGGCGTCTCCGATCTGCTGGAGCAGTCAAAGGTCCGCAACGAGATCGTGATCCTCGTTGTGGACATGTGG
GCGGCCAAACTGGAGAACGTGCGTCGGGCCCTGGCCACCTACGACGTTCGCAACGAGCCGACGTCGGGCGTCCTGGTGCC
GGTGAACCCGCACGACCTGGAGACCCATGCCAACTCCGCGCATCTCACCGAGGTACTGGCGACCGCGCTGCGGAACAACT
TCGTCCGCCGGGACAAGCTGTTCCGCATGGATGTCCACTCCTGCGAGGAGTTCGACCTGGCCCTGGTCCAGATAATCGTC
GAGTCGCAAGCGCGGATCTTCGAGTACCGGCGGGCCCTGCGGCCGACGGGGGACAACCCCCGTCGGTTTCCCCGGCTTTC
CGGCCCCTAG

Upstream 100 bases:

>100_bases
GGCCGAGTGCACCCTAACTTGAGCCGGCCTACGTGGCGCGGCCACGCCGGGCCGCGGGAGAGGGGCCACTCGGTGTCGGG
GGAGAGCGTCGGGCGGGGGC

Downstream 100 bases:

>100_bases
GCGGTGTCGGTGTCTGGTACGGACTTCGGAACCGTCGTCACCTTCTACTCCTACAAGGGTGGCACCGGCCGGTCCATGGC
GCTCGCCAACACCGCCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MPRVGPIRKTTSRGFPGVPEHGYLHRLTPAGMPEAWSARPLYFFFSYARADSRDDPLLERFFRDLRAEVRRRVGHPDPDT
VGFLDQRSIQPGEAWSTELGAALCRCRTFVAMCSPSFFASEHCGREWGMFDERLRSAAASAQACPAALLPVIWTPLRDPP
ELLARLQYDHSGLGKTYTQFGLRYLMQLKRNHDEYQEFVLTLAVRIVQLAEDSPLAPKSEIPPLQEVPDAFRVLARPPLT
RDQEDVPPEMRATVVPDPPRADRAEDDVPVVDKGQGKPPSPDRQTAPAPDPPQSSTPPRPLQEAPSPIVGGPGRVTFVFA
STSAEEIATLRRQLDCYGETFEEWTPYKPRAHDRVCVIAQMVAARQGLVSNIVPLDHGVSDLLEQSKVRNEIVILVVDMW
AAKLENVRRALATYDVRNEPTSGVLVPVNPHDLETHANSAHLTEVLATALRNNFVRRDKLFRMDVHSCEEFDLALVQIIV
ESQARIFEYRRALRPTGDNPRRFPRLSGP

Sequences:

>Translated_509_residues
MPRVGPIRKTTSRGFPGVPEHGYLHRLTPAGMPEAWSARPLYFFFSYARADSRDDPLLERFFRDLRAEVRRRVGHPDPDT
VGFLDQRSIQPGEAWSTELGAALCRCRTFVAMCSPSFFASEHCGREWGMFDERLRSAAASAQACPAALLPVIWTPLRDPP
ELLARLQYDHSGLGKTYTQFGLRYLMQLKRNHDEYQEFVLTLAVRIVQLAEDSPLAPKSEIPPLQEVPDAFRVLARPPLT
RDQEDVPPEMRATVVPDPPRADRAEDDVPVVDKGQGKPPSPDRQTAPAPDPPQSSTPPRPLQEAPSPIVGGPGRVTFVFA
STSAEEIATLRRQLDCYGETFEEWTPYKPRAHDRVCVIAQMVAARQGLVSNIVPLDHGVSDLLEQSKVRNEIVILVVDMW
AAKLENVRRALATYDVRNEPTSGVLVPVNPHDLETHANSAHLTEVLATALRNNFVRRDKLFRMDVHSCEEFDLALVQIIV
ESQARIFEYRRALRPTGDNPRRFPRLSGP
>Mature_508_residues
PRVGPIRKTTSRGFPGVPEHGYLHRLTPAGMPEAWSARPLYFFFSYARADSRDDPLLERFFRDLRAEVRRRVGHPDPDTV
GFLDQRSIQPGEAWSTELGAALCRCRTFVAMCSPSFFASEHCGREWGMFDERLRSAAASAQACPAALLPVIWTPLRDPPE
LLARLQYDHSGLGKTYTQFGLRYLMQLKRNHDEYQEFVLTLAVRIVQLAEDSPLAPKSEIPPLQEVPDAFRVLARPPLTR
DQEDVPPEMRATVVPDPPRADRAEDDVPVVDKGQGKPPSPDRQTAPAPDPPQSSTPPRPLQEAPSPIVGGPGRVTFVFAS
TSAEEIATLRRQLDCYGETFEEWTPYKPRAHDRVCVIAQMVAARQGLVSNIVPLDHGVSDLLEQSKVRNEIVILVVDMWA
AKLENVRRALATYDVRNEPTSGVLVPVNPHDLETHANSAHLTEVLATALRNNFVRRDKLFRMDVHSCEEFDLALVQIIVE
SQARIFEYRRALRPTGDNPRRFPRLSGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57190; Mature: 57058

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVGPIRKTTSRGFPGVPEHGYLHRLTPAGMPEAWSARPLYFFFSYARADSRDDPLLER
CCCCCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH
FFRDLRAEVRRRVGHPDPDTVGFLDQRSIQPGEAWSTELGAALCRCRTFVAMCSPSFFAS
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
EHCGREWGMFDERLRSAAASAQACPAALLPVIWTPLRDPPELLARLQYDHSGLGKTYTQF
HHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH
GLRYLMQLKRNHDEYQEFVLTLAVRIVQLAEDSPLAPKSEIPPLQEVPDAFRVLARPPLT
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
RDQEDVPPEMRATVVPDPPRADRAEDDVPVVDKGQGKPPSPDRQTAPAPDPPQSSTPPRP
CCCCCCCCHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LQEAPSPIVGGPGRVTFVFASTSAEEIATLRRQLDCYGETFEEWTPYKPRAHDRVCVIAQ
HHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
MVAARQGLVSNIVPLDHGVSDLLEQSKVRNEIVILVVDMWAAKLENVRRALATYDVRNEP
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC
TSGVLVPVNPHDLETHANSAHLTEVLATALRNNFVRRDKLFRMDVHSCEEFDLALVQIIV
CCCEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHH
ESQARIFEYRRALRPTGDNPRRFPRLSGP
HHHHHHHHHHHHHCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
PRVGPIRKTTSRGFPGVPEHGYLHRLTPAGMPEAWSARPLYFFFSYARADSRDDPLLER
CCCCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH
FFRDLRAEVRRRVGHPDPDTVGFLDQRSIQPGEAWSTELGAALCRCRTFVAMCSPSFFAS
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
EHCGREWGMFDERLRSAAASAQACPAALLPVIWTPLRDPPELLARLQYDHSGLGKTYTQF
HHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH
GLRYLMQLKRNHDEYQEFVLTLAVRIVQLAEDSPLAPKSEIPPLQEVPDAFRVLARPPLT
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
RDQEDVPPEMRATVVPDPPRADRAEDDVPVVDKGQGKPPSPDRQTAPAPDPPQSSTPPRP
CCCCCCCCHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LQEAPSPIVGGPGRVTFVFASTSAEEIATLRRQLDCYGETFEEWTPYKPRAHDRVCVIAQ
HHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
MVAARQGLVSNIVPLDHGVSDLLEQSKVRNEIVILVVDMWAAKLENVRRALATYDVRNEP
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC
TSGVLVPVNPHDLETHANSAHLTEVLATALRNNFVRRDKLFRMDVHSCEEFDLALVQIIV
CCCEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHH
ESQARIFEYRRALRPTGDNPRRFPRLSGP
HHHHHHHHHHHHHCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA