| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317473
Identifier: 158317473
GI number: 158317473
Start: 6952702
End: 6954231
Strand: Reverse
Name: 158317473
Synonym: Franean1_5725
Alternate gene names: NA
Gene position: 6954231-6952702 (Counterclockwise)
Preceding gene: 158317476
Following gene: 158317472
Centisome position: 77.42
GC content: 66.99
Gene sequence:
>1530_bases TTGCCCAGGGTCGGTCCCATACGGAAGACGACCTCCCGGGGTTTTCCCGGGGTACCCGAGCACGGGTACCTGCATCGGCT GACGCCGGCCGGCATGCCTGAAGCCTGGAGCGCGCGGCCGCTGTACTTCTTTTTCAGCTATGCCAGGGCGGACAGCCGTG ACGACCCGCTGCTCGAGCGGTTCTTCCGTGATCTCAGAGCCGAGGTGCGCCGCCGGGTGGGTCATCCGGACCCGGACACC GTTGGCTTCCTTGACCAGCGCAGCATCCAGCCGGGGGAGGCCTGGTCGACGGAGCTTGGCGCGGCACTCTGCCGGTGCAG AACCTTCGTGGCGATGTGCTCGCCCTCGTTCTTCGCGAGTGAGCACTGCGGCCGTGAATGGGGGATGTTCGACGAGCGGC TGCGCTCCGCCGCCGCATCGGCCCAGGCCTGTCCGGCGGCGCTGCTTCCCGTGATCTGGACGCCGTTACGCGATCCGCCG GAGCTGCTCGCCCGGTTGCAGTATGATCACAGCGGGTTGGGGAAGACGTACACGCAGTTCGGGTTGCGGTATCTCATGCA GCTCAAGCGCAATCATGACGAGTACCAGGAGTTCGTGCTGACATTAGCGGTTCGGATCGTCCAACTCGCTGAGGACTCGC CGTTGGCCCCGAAGTCCGAGATCCCGCCACTCCAAGAGGTTCCCGACGCATTCCGCGTACTCGCCAGGCCACCGTTGACA CGTGATCAGGAAGATGTGCCGCCTGAGATGCGGGCGACGGTCGTTCCCGACCCGCCGCGAGCCGACCGTGCCGAGGACGA CGTCCCCGTGGTGGACAAGGGGCAGGGCAAGCCGCCGTCACCGGATCGGCAGACGGCGCCCGCGCCTGATCCGCCCCAGT CCTCGACTCCGCCCCGCCCGCTCCAGGAGGCGCCGTCGCCCATCGTGGGCGGGCCGGGCCGCGTGACTTTCGTGTTCGCC TCGACGTCGGCCGAGGAGATCGCCACGTTGCGCCGTCAGCTCGACTGTTACGGCGAGACCTTCGAGGAGTGGACGCCGTA CAAGCCTCGTGCCCACGACCGGGTCTGCGTGATCGCCCAGATGGTTGCCGCCAGGCAGGGTCTTGTCTCGAACATCGTGC CACTGGACCACGGCGTCTCCGATCTGCTGGAGCAGTCAAAGGTCCGCAACGAGATCGTGATCCTCGTTGTGGACATGTGG GCGGCCAAACTGGAGAACGTGCGTCGGGCCCTGGCCACCTACGACGTTCGCAACGAGCCGACGTCGGGCGTCCTGGTGCC GGTGAACCCGCACGACCTGGAGACCCATGCCAACTCCGCGCATCTCACCGAGGTACTGGCGACCGCGCTGCGGAACAACT TCGTCCGCCGGGACAAGCTGTTCCGCATGGATGTCCACTCCTGCGAGGAGTTCGACCTGGCCCTGGTCCAGATAATCGTC GAGTCGCAAGCGCGGATCTTCGAGTACCGGCGGGCCCTGCGGCCGACGGGGGACAACCCCCGTCGGTTTCCCCGGCTTTC CGGCCCCTAG
Upstream 100 bases:
>100_bases GGCCGAGTGCACCCTAACTTGAGCCGGCCTACGTGGCGCGGCCACGCCGGGCCGCGGGAGAGGGGCCACTCGGTGTCGGG GGAGAGCGTCGGGCGGGGGC
Downstream 100 bases:
>100_bases GCGGTGTCGGTGTCTGGTACGGACTTCGGAACCGTCGTCACCTTCTACTCCTACAAGGGTGGCACCGGCCGGTCCATGGC GCTCGCCAACACCGCCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MPRVGPIRKTTSRGFPGVPEHGYLHRLTPAGMPEAWSARPLYFFFSYARADSRDDPLLERFFRDLRAEVRRRVGHPDPDT VGFLDQRSIQPGEAWSTELGAALCRCRTFVAMCSPSFFASEHCGREWGMFDERLRSAAASAQACPAALLPVIWTPLRDPP ELLARLQYDHSGLGKTYTQFGLRYLMQLKRNHDEYQEFVLTLAVRIVQLAEDSPLAPKSEIPPLQEVPDAFRVLARPPLT RDQEDVPPEMRATVVPDPPRADRAEDDVPVVDKGQGKPPSPDRQTAPAPDPPQSSTPPRPLQEAPSPIVGGPGRVTFVFA STSAEEIATLRRQLDCYGETFEEWTPYKPRAHDRVCVIAQMVAARQGLVSNIVPLDHGVSDLLEQSKVRNEIVILVVDMW AAKLENVRRALATYDVRNEPTSGVLVPVNPHDLETHANSAHLTEVLATALRNNFVRRDKLFRMDVHSCEEFDLALVQIIV ESQARIFEYRRALRPTGDNPRRFPRLSGP
Sequences:
>Translated_509_residues MPRVGPIRKTTSRGFPGVPEHGYLHRLTPAGMPEAWSARPLYFFFSYARADSRDDPLLERFFRDLRAEVRRRVGHPDPDT VGFLDQRSIQPGEAWSTELGAALCRCRTFVAMCSPSFFASEHCGREWGMFDERLRSAAASAQACPAALLPVIWTPLRDPP ELLARLQYDHSGLGKTYTQFGLRYLMQLKRNHDEYQEFVLTLAVRIVQLAEDSPLAPKSEIPPLQEVPDAFRVLARPPLT RDQEDVPPEMRATVVPDPPRADRAEDDVPVVDKGQGKPPSPDRQTAPAPDPPQSSTPPRPLQEAPSPIVGGPGRVTFVFA STSAEEIATLRRQLDCYGETFEEWTPYKPRAHDRVCVIAQMVAARQGLVSNIVPLDHGVSDLLEQSKVRNEIVILVVDMW AAKLENVRRALATYDVRNEPTSGVLVPVNPHDLETHANSAHLTEVLATALRNNFVRRDKLFRMDVHSCEEFDLALVQIIV ESQARIFEYRRALRPTGDNPRRFPRLSGP >Mature_508_residues PRVGPIRKTTSRGFPGVPEHGYLHRLTPAGMPEAWSARPLYFFFSYARADSRDDPLLERFFRDLRAEVRRRVGHPDPDTV GFLDQRSIQPGEAWSTELGAALCRCRTFVAMCSPSFFASEHCGREWGMFDERLRSAAASAQACPAALLPVIWTPLRDPPE LLARLQYDHSGLGKTYTQFGLRYLMQLKRNHDEYQEFVLTLAVRIVQLAEDSPLAPKSEIPPLQEVPDAFRVLARPPLTR DQEDVPPEMRATVVPDPPRADRAEDDVPVVDKGQGKPPSPDRQTAPAPDPPQSSTPPRPLQEAPSPIVGGPGRVTFVFAS TSAEEIATLRRQLDCYGETFEEWTPYKPRAHDRVCVIAQMVAARQGLVSNIVPLDHGVSDLLEQSKVRNEIVILVVDMWA AKLENVRRALATYDVRNEPTSGVLVPVNPHDLETHANSAHLTEVLATALRNNFVRRDKLFRMDVHSCEEFDLALVQIIVE SQARIFEYRRALRPTGDNPRRFPRLSGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57190; Mature: 57058
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRVGPIRKTTSRGFPGVPEHGYLHRLTPAGMPEAWSARPLYFFFSYARADSRDDPLLER CCCCCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH FFRDLRAEVRRRVGHPDPDTVGFLDQRSIQPGEAWSTELGAALCRCRTFVAMCSPSFFAS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH EHCGREWGMFDERLRSAAASAQACPAALLPVIWTPLRDPPELLARLQYDHSGLGKTYTQF HHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH GLRYLMQLKRNHDEYQEFVLTLAVRIVQLAEDSPLAPKSEIPPLQEVPDAFRVLARPPLT HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC RDQEDVPPEMRATVVPDPPRADRAEDDVPVVDKGQGKPPSPDRQTAPAPDPPQSSTPPRP CCCCCCCCHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LQEAPSPIVGGPGRVTFVFASTSAEEIATLRRQLDCYGETFEEWTPYKPRAHDRVCVIAQ HHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH MVAARQGLVSNIVPLDHGVSDLLEQSKVRNEIVILVVDMWAAKLENVRRALATYDVRNEP HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC TSGVLVPVNPHDLETHANSAHLTEVLATALRNNFVRRDKLFRMDVHSCEEFDLALVQIIV CCCEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHH ESQARIFEYRRALRPTGDNPRRFPRLSGP HHHHHHHHHHHHHCCCCCCHHHCCCCCCC >Mature Secondary Structure PRVGPIRKTTSRGFPGVPEHGYLHRLTPAGMPEAWSARPLYFFFSYARADSRDDPLLER CCCCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH FFRDLRAEVRRRVGHPDPDTVGFLDQRSIQPGEAWSTELGAALCRCRTFVAMCSPSFFAS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH EHCGREWGMFDERLRSAAASAQACPAALLPVIWTPLRDPPELLARLQYDHSGLGKTYTQF HHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH GLRYLMQLKRNHDEYQEFVLTLAVRIVQLAEDSPLAPKSEIPPLQEVPDAFRVLARPPLT HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC RDQEDVPPEMRATVVPDPPRADRAEDDVPVVDKGQGKPPSPDRQTAPAPDPPQSSTPPRP CCCCCCCCHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LQEAPSPIVGGPGRVTFVFASTSAEEIATLRRQLDCYGETFEEWTPYKPRAHDRVCVIAQ HHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH MVAARQGLVSNIVPLDHGVSDLLEQSKVRNEIVILVVDMWAAKLENVRRALATYDVRNEP HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC TSGVLVPVNPHDLETHANSAHLTEVLATALRNNFVRRDKLFRMDVHSCEEFDLALVQIIV CCCEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHH ESQARIFEYRRALRPTGDNPRRFPRLSGP HHHHHHHHHHHHHCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA