| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317476
Identifier: 158317476
GI number: 158317476
Start: 6958064
End: 6960613
Strand: Reverse
Name: 158317476
Synonym: Franean1_5728
Alternate gene names: NA
Gene position: 6960613-6958064 (Counterclockwise)
Preceding gene: 158317478
Following gene: 158317473
Centisome position: 77.49
GC content: 66.43
Gene sequence:
>2550_bases GTGGTGGAGTTCGACTCGGCGAGCGGGCCGAGTCGAGGCGTTCCGATGATTTGGGGTGGTGTACCCCAGCGGAACAAGAA CTTCACCGGGCGAGAAAGCCAGCTCGCCGAGCTCCGTCGCCGTGTCTCCTCCGAGCAGACCGACGTCACCGCCGTCCTGC CGCACGCCCTCCAGGGCCTGGGTGGTGTCGGGAAAACTCACCTCGCCATCGAGTACGCGTACCGGTACCAGTCCCACTAC GACCTGATCTGGTGGATCCCCGCCGACCAGCCGGCGCTCGTCCGCTCCAACCTGGCCGCGCTGGCGCCTCGTCTCGGCCT GTCCGAGGGCGGCCTGCTGCGGGTCGAGGACTCGGTTGCCGCCGTTCTCGACGCCCTGCGCCGGGGCGAGCCCTACCACC GATGGTTGTTGATCTTCGACAACGCCGACCAGCCCGAGCTGATCCGCAGCCTGATGCCCCACGGCCCCGGCCATGTACTC GTAACTTCGCGTAACCGGCGATGGCAGAGCATCGTCGACACGATCGAGGTCGACGTCTTCGCTCGCCGCGAGAGCCTGGA GTTCCTCGATCGTCGGGTTCCCGGCATCGCGGAGTTCGACGCCAACCGGCTGGCCGAGGCGCTCGGGGACCTGCCGCTGG CGCTGGAGCAGGCCGGGGCGCTGCAGTTCGAAACCGGGATGGGCGTCGAGGAGTACCTGGACCTGCTCGGGGAGGCGTCG AGTCGGCTGCTGGCGGAGAACCCGCCGTCCGACTACTCGAAGCCGGTGGCGGCCGCGTGGAGCCTGTCGGTGACCCGGCT GCGCGATCAGGCGCCCTTCGCGCTCGAACTGCTGCGGCGGTGTGCCTTCTTCGGCCCGGAGCCGATCTCGCTGGAGATGC TCGACCGCGGCAAGTACACCCTGAGCTCCGACTTCGGCCGGTCGATGCAGGACCGGTTGCTGGTGAGCCGCGCCATGCGC GAACTCGGCCGCTATGCGCTAGCGAAGATCGACACCAGTCGCAAGACGGTGCAGGTGCACCGCCTGGTCCAGATGCTCAT CCGCGAAGAGCTCCCGGCCGAGGAGCAGGCCCGCATGCGGGACGAAGTCCACGCACTGCTGGTGGCCGCCGACCCGGGGA ACTCCGAGACCCAGAACCGGGTCGAGTTCGAGAACCTGCTCCCACACATCGTGCCCTCCGGTGTCTTCGAGTCCACCGAG GTCCCGGCCCGTCAGCTCATCGAGCACATCATCGGGTACCTGTACAACGTCGGAGACTTCACCACGGGCCTGAACGAGGC GGACCGCGCATTGCGGCAGTGGGAGAAGGCCTCCGGCGAGCGCGATCCGGACGTGCTCGTGCTGAAGGGGATCAAGGCGA ACATCCTCTGGTCGCTAGGTAGATCTCAGGACGCATATGACCTGCGACGGCCCACCCTGGAGGCGATCACTGAGGTCCTC GGGCCGGACCACGAGGAGACTCTGATCATCCTCAACGGCCATGGCGCCGACCTGCGTTCCCGCGGCGAGTTCCGGGCGGC GCTCGTGCTCGACGAGGACGCCCTTCCCCGACACGAAAGAGTTTTCGGTACATATACTCACGAAACCCTTCTTTGTGTCA ACAATCTCGCATTGGACTACAGCCTCAACAGCTCCTATGAGCTTGCGCTGCGGCGGGATCAGGAGAACCTCGCCAACAGG CGGGACCTGTCGGGCGGTGATACGGATCCTTGGGTTGCGCTCTCGTTGGCTGCTGTCGCCCGTGACCTGCGGCAGGCGGG CCATTACCTGAAAGCCCGGGATGCGGCGGAACACGCCTACCGGGTTTATGAAGATCTCGTCGACCGTGGGCGACTTACCG CCGATCATCCGTACGTTCTCGCGCAGGCGAAGGATCTCTCGGTCGCCCGGCGGAAGGCCGGGCTCTTCCCCGAGGCCCTG GTGCTCGCCGAGCAGGTCTACGGTCGTTACACGGAGAGTCGGCAGTTCGAAAAAGAACATCCCGAAGCCCTTGCCGCCGC GATCAATTTGGGGAATGCGCAGCGGGTCGCGGGTGATCCGAATGACGCGGCGGAGCGTATCGAGAAGACCGTAAATCGGT ATCGTGAAGCTCTTGGTGCCGACCATCCGTATACCTACGGTTGTTATCTGAACCTAGCGCTGGTCCATCGTCAGCTTGGC CGGGTCGACGAGGCCGAGCGCCTGCTCAAGGACGCGCTCGCGGGTCTGGAAGGCAGGCTCGGCCCGGACCACCACTTCAC GTTGACCTGCCGGGCGAACCTGGCCACCGCTCGATCCGCGCAGGGTGCGGTCAGCGAGGCCCTGGAGACCGGGGAACAGA CCCTGAACTCGTTCCGTGACCTGCTGGGTCCTGATCACCCGCACACCCTGGTCTGCGCGACCAATGTCGCGTTGGACCTG GCCCAGCTCGGCCGGAACGACGAGGCCAAGAACCTCTCCGCCGACACCGTCACCCGTTACCGCCGGGTTCTGGGCCCGGA GCATCCCGACGTGCGGGCCGGTGAGCGCGGCGAGCGGCTCGACTTCGACTTCGAGCCGCCGCCGCTGTAG
Upstream 100 bases:
>100_bases GCGCGCCGTCGACGCATGTGCTGGGCCAGTGTGCGCGGCTCGTATGCTCGGCGGCTGTTCTGTACCGACAGTCGGGCGGG GGCGGTCGAAGGTGGCTTCG
Downstream 100 bases:
>100_bases GCCCACCGGAGACTCGTCTGCCGGCCGCGGTGGATCCGGCCCGGTCAGGGCACCGGTTCGGGTAGCCAGGAGGCGACGGC GTCCGGATCGGCGCGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NB-ARC Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; NB-ARC Domain Protein; Tetratricopeptide Repeat Family Protein; Serine/Threonine Protein Kinase; Tetratricopeptide Domain-Containing Protein; Kinesin Light Chain; TIR Protein; Tetratricopeptide Repeat-Containing Protein; SARP Family Transcriptional Regulator; Sigma-70 Region 2 Domain Protein; TPR Domain Family Protein; SEC-C Motif Domain Protein; Ankyrin Repeat Domain Protein; Helix-Turn-Helix Psq Domain Protein; Tetratricopeptide Repeat Protein; LigA Protein; NTPase-Like Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Nb-Arc; Tetratricopeptide TPR4 Domain-Containing Protein; Sel1 Domain-Containing Protein; Ankyrin And Tpr Repeat Domain Protein; Peptidase-Like; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 849; Mature: 849
Protein sequence:
>849_residues MVEFDSASGPSRGVPMIWGGVPQRNKNFTGRESQLAELRRRVSSEQTDVTAVLPHALQGLGGVGKTHLAIEYAYRYQSHY DLIWWIPADQPALVRSNLAALAPRLGLSEGGLLRVEDSVAAVLDALRRGEPYHRWLLIFDNADQPELIRSLMPHGPGHVL VTSRNRRWQSIVDTIEVDVFARRESLEFLDRRVPGIAEFDANRLAEALGDLPLALEQAGALQFETGMGVEEYLDLLGEAS SRLLAENPPSDYSKPVAAAWSLSVTRLRDQAPFALELLRRCAFFGPEPISLEMLDRGKYTLSSDFGRSMQDRLLVSRAMR ELGRYALAKIDTSRKTVQVHRLVQMLIREELPAEEQARMRDEVHALLVAADPGNSETQNRVEFENLLPHIVPSGVFESTE VPARQLIEHIIGYLYNVGDFTTGLNEADRALRQWEKASGERDPDVLVLKGIKANILWSLGRSQDAYDLRRPTLEAITEVL GPDHEETLIILNGHGADLRSRGEFRAALVLDEDALPRHERVFGTYTHETLLCVNNLALDYSLNSSYELALRRDQENLANR RDLSGGDTDPWVALSLAAVARDLRQAGHYLKARDAAEHAYRVYEDLVDRGRLTADHPYVLAQAKDLSVARRKAGLFPEAL VLAEQVYGRYTESRQFEKEHPEALAAAINLGNAQRVAGDPNDAAERIEKTVNRYREALGADHPYTYGCYLNLALVHRQLG RVDEAERLLKDALAGLEGRLGPDHHFTLTCRANLATARSAQGAVSEALETGEQTLNSFRDLLGPDHPHTLVCATNVALDL AQLGRNDEAKNLSADTVTRYRRVLGPEHPDVRAGERGERLDFDFEPPPL
Sequences:
>Translated_849_residues MVEFDSASGPSRGVPMIWGGVPQRNKNFTGRESQLAELRRRVSSEQTDVTAVLPHALQGLGGVGKTHLAIEYAYRYQSHY DLIWWIPADQPALVRSNLAALAPRLGLSEGGLLRVEDSVAAVLDALRRGEPYHRWLLIFDNADQPELIRSLMPHGPGHVL VTSRNRRWQSIVDTIEVDVFARRESLEFLDRRVPGIAEFDANRLAEALGDLPLALEQAGALQFETGMGVEEYLDLLGEAS SRLLAENPPSDYSKPVAAAWSLSVTRLRDQAPFALELLRRCAFFGPEPISLEMLDRGKYTLSSDFGRSMQDRLLVSRAMR ELGRYALAKIDTSRKTVQVHRLVQMLIREELPAEEQARMRDEVHALLVAADPGNSETQNRVEFENLLPHIVPSGVFESTE VPARQLIEHIIGYLYNVGDFTTGLNEADRALRQWEKASGERDPDVLVLKGIKANILWSLGRSQDAYDLRRPTLEAITEVL GPDHEETLIILNGHGADLRSRGEFRAALVLDEDALPRHERVFGTYTHETLLCVNNLALDYSLNSSYELALRRDQENLANR RDLSGGDTDPWVALSLAAVARDLRQAGHYLKARDAAEHAYRVYEDLVDRGRLTADHPYVLAQAKDLSVARRKAGLFPEAL VLAEQVYGRYTESRQFEKEHPEALAAAINLGNAQRVAGDPNDAAERIEKTVNRYREALGADHPYTYGCYLNLALVHRQLG RVDEAERLLKDALAGLEGRLGPDHHFTLTCRANLATARSAQGAVSEALETGEQTLNSFRDLLGPDHPHTLVCATNVALDL AQLGRNDEAKNLSADTVTRYRRVLGPEHPDVRAGERGERLDFDFEPPPL >Mature_849_residues MVEFDSASGPSRGVPMIWGGVPQRNKNFTGRESQLAELRRRVSSEQTDVTAVLPHALQGLGGVGKTHLAIEYAYRYQSHY DLIWWIPADQPALVRSNLAALAPRLGLSEGGLLRVEDSVAAVLDALRRGEPYHRWLLIFDNADQPELIRSLMPHGPGHVL VTSRNRRWQSIVDTIEVDVFARRESLEFLDRRVPGIAEFDANRLAEALGDLPLALEQAGALQFETGMGVEEYLDLLGEAS SRLLAENPPSDYSKPVAAAWSLSVTRLRDQAPFALELLRRCAFFGPEPISLEMLDRGKYTLSSDFGRSMQDRLLVSRAMR ELGRYALAKIDTSRKTVQVHRLVQMLIREELPAEEQARMRDEVHALLVAADPGNSETQNRVEFENLLPHIVPSGVFESTE VPARQLIEHIIGYLYNVGDFTTGLNEADRALRQWEKASGERDPDVLVLKGIKANILWSLGRSQDAYDLRRPTLEAITEVL GPDHEETLIILNGHGADLRSRGEFRAALVLDEDALPRHERVFGTYTHETLLCVNNLALDYSLNSSYELALRRDQENLANR RDLSGGDTDPWVALSLAAVARDLRQAGHYLKARDAAEHAYRVYEDLVDRGRLTADHPYVLAQAKDLSVARRKAGLFPEAL VLAEQVYGRYTESRQFEKEHPEALAAAINLGNAQRVAGDPNDAAERIEKTVNRYREALGADHPYTYGCYLNLALVHRQLG RVDEAERLLKDALAGLEGRLGPDHHFTLTCRANLATARSAQGAVSEALETGEQTLNSFRDLLGPDHPHTLVCATNVALDL AQLGRNDEAKNLSADTVTRYRRVLGPEHPDVRAGERGERLDFDFEPPPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94687; Mature: 94687
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEFDSASGPSRGVPMIWGGVPQRNKNFTGRESQLAELRRRVSSEQTDVTAVLPHALQGL CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHC GGVGKTHLAIEYAYRYQSHYDLIWWIPADQPALVRSNLAALAPRLGLSEGGLLRVEDSVA CCCCCHHEEEEEHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHH AVLDALRRGEPYHRWLLIFDNADQPELIRSLMPHGPGHVLVTSRNRRWQSIVDTIEVDVF HHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH ARRESLEFLDRRVPGIAEFDANRLAEALGDLPLALEQAGALQFETGMGVEEYLDLLGEAS HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHH SRLLAENPPSDYSKPVAAAWSLSVTRLRDQAPFALELLRRCAFFGPEPISLEMLDRGKYT HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEE LSSDFGRSMQDRLLVSRAMRELGRYALAKIDTSRKTVQVHRLVQMLIREELPAEEQARMR ECHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH DEVHALLVAADPGNSETQNRVEFENLLPHIVPSGVFESTEVPARQLIEHIIGYLYNVGDF HHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TTGLNEADRALRQWEKASGERDPDVLVLKGIKANILWSLGRSQDAYDLRRPTLEAITEVL HCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHEEECCCCCCCHHHHCCHHHHHHHHH GPDHEETLIILNGHGADLRSRGEFRAALVLDEDALPRHERVFGTYTHETLLCVNNLALDY CCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHEEECCHHHHHHHHCEEEEE SLNSSYELALRRDQENLANRRDLSGGDTDPWVALSLAAVARDLRQAGHYLKARDAAEHAY ECCCCEEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH RVYEDLVDRGRLTADHPYVLAQAKDLSVARRKAGLFPEALVLAEQVYGRYTESRQFEKEH HHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH PEALAAAINLGNAQRVAGDPNDAAERIEKTVNRYREALGADHPYTYGCYLNLALVHRQLG HHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHC RVDEAERLLKDALAGLEGRLGPDHHFTLTCRANLATARSAQGAVSEALETGEQTLNSFRD CHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGPDHPHTLVCATNVALDLAQLGRNDEAKNLSADTVTRYRRVLGPEHPDVRAGERGERL HHCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC DFDFEPPPL CCCCCCCCC >Mature Secondary Structure MVEFDSASGPSRGVPMIWGGVPQRNKNFTGRESQLAELRRRVSSEQTDVTAVLPHALQGL CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHC GGVGKTHLAIEYAYRYQSHYDLIWWIPADQPALVRSNLAALAPRLGLSEGGLLRVEDSVA CCCCCHHEEEEEHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHH AVLDALRRGEPYHRWLLIFDNADQPELIRSLMPHGPGHVLVTSRNRRWQSIVDTIEVDVF HHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH ARRESLEFLDRRVPGIAEFDANRLAEALGDLPLALEQAGALQFETGMGVEEYLDLLGEAS HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHH SRLLAENPPSDYSKPVAAAWSLSVTRLRDQAPFALELLRRCAFFGPEPISLEMLDRGKYT HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEE LSSDFGRSMQDRLLVSRAMRELGRYALAKIDTSRKTVQVHRLVQMLIREELPAEEQARMR ECHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH DEVHALLVAADPGNSETQNRVEFENLLPHIVPSGVFESTEVPARQLIEHIIGYLYNVGDF HHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TTGLNEADRALRQWEKASGERDPDVLVLKGIKANILWSLGRSQDAYDLRRPTLEAITEVL HCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHEEECCCCCCCHHHHCCHHHHHHHHH GPDHEETLIILNGHGADLRSRGEFRAALVLDEDALPRHERVFGTYTHETLLCVNNLALDY CCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHEEECCHHHHHHHHCEEEEE SLNSSYELALRRDQENLANRRDLSGGDTDPWVALSLAAVARDLRQAGHYLKARDAAEHAY ECCCCEEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH RVYEDLVDRGRLTADHPYVLAQAKDLSVARRKAGLFPEALVLAEQVYGRYTESRQFEKEH HHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH PEALAAAINLGNAQRVAGDPNDAAERIEKTVNRYREALGADHPYTYGCYLNLALVHRQLG HHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHC RVDEAERLLKDALAGLEGRLGPDHHFTLTCRANLATARSAQGAVSEALETGEQTLNSFRD CHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGPDHPHTLVCATNVALDLAQLGRNDEAKNLSADTVTRYRRVLGPEHPDVRAGERGERL HHCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC DFDFEPPPL CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA