| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317448
Identifier: 158317448
GI number: 158317448
Start: 6918205
End: 6918963
Strand: Reverse
Name: 158317448
Synonym: Franean1_5700
Alternate gene names: NA
Gene position: 6918963-6918205 (Counterclockwise)
Preceding gene: 158317451
Following gene: 158317447
Centisome position: 77.03
GC content: 78.0
Gene sequence:
>759_bases GTGGGCGGGATCGAGACAGTAGATGTGACGGTTCTGGAGGCCGGGCGAACGAGCCTGCTGCACGCGCGGGTCGAGCCCGG TGGCCCGGGCCGGTCGGGGCGGGTGCTCGTCCGCCCGGCCGAGGGCGGCGGGCTGCTCGGGTGGCGCCTGCGGCCACAGG GGTGGTGCCGCGGCGGCGTCTGCATCCCCGCGTCCGTCGCCGCGCGGCGGCTCGGCGTGGGGGAGCGGGGGCTCGGCGCG GAGGACTGGATCGACGAGGCCGGCCGCCTCGTCCGGCCGCCCGACACGCAGACCGCGACGGACACCTTCCGGTCCATGAA CGGCATCGACTCCGCCCGCGCGCTCGCGGCGCTGCGCAGGTGGGTGACGACCGGGCGACCGGGGCTCGGCGCCGAGGACG TCCGTCGGCACCTGCGCCCGCCGTCCGATGACGACCAGCGCGCCCGGCTGGCCGCGGCGATCGGGATCCACCTGCACCGC GCCGGCCAGACCGAGGCGGCAGCGGCCTACCTTGAGGAGGCGGGGCGGCTGGCGCCCCACCAGGTGGCGATCCGGCGCGG GACGACGCGGCTGCGCGGCGCCGACCCGTTCGGCCAGGAGTACTTCGACCTGCGGGCCGAGCTGGAGGCGAACGGCGTCC CGATCTACCGCCCGCTCCCGGACTGGCAGGCGGAGGAGACCAGCCCCGCACCGCCGCCGCCCGTCGAAGCGGCCGGGTCG GGTTGCGGTGGCGGTGGGCGCTCGCTGGTGGACCGGTGA
Upstream 100 bases:
>100_bases CCACAGCCCGGCCTGCGCAGCGTAGCCCCGTGCTGCGACAGTATGGAAACGGAAGATCGATAACGTTGTTTTTTATTGGG AACGGCGTTACGGTCGATGG
Downstream 100 bases:
>100_bases GCGTCGCGGACGGCGCCGTCCGCCGTTCCCGTGCCGCGGCGGGGGAGGCGCTGCGACGGGAGGCGGTCGAGGCGGCCGCC GAGCTGCTGGTCAGCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MGGIETVDVTVLEAGRTSLLHARVEPGGPGRSGRVLVRPAEGGGLLGWRLRPQGWCRGGVCIPASVAARRLGVGERGLGA EDWIDEAGRLVRPPDTQTATDTFRSMNGIDSARALAALRRWVTTGRPGLGAEDVRRHLRPPSDDDQRARLAAAIGIHLHR AGQTEAAAAYLEEAGRLAPHQVAIRRGTTRLRGADPFGQEYFDLRAELEANGVPIYRPLPDWQAEETSPAPPPPVEAAGS GCGGGGRSLVDR
Sequences:
>Translated_252_residues MGGIETVDVTVLEAGRTSLLHARVEPGGPGRSGRVLVRPAEGGGLLGWRLRPQGWCRGGVCIPASVAARRLGVGERGLGA EDWIDEAGRLVRPPDTQTATDTFRSMNGIDSARALAALRRWVTTGRPGLGAEDVRRHLRPPSDDDQRARLAAAIGIHLHR AGQTEAAAAYLEEAGRLAPHQVAIRRGTTRLRGADPFGQEYFDLRAELEANGVPIYRPLPDWQAEETSPAPPPPVEAAGS GCGGGGRSLVDR >Mature_251_residues GGIETVDVTVLEAGRTSLLHARVEPGGPGRSGRVLVRPAEGGGLLGWRLRPQGWCRGGVCIPASVAARRLGVGERGLGAE DWIDEAGRLVRPPDTQTATDTFRSMNGIDSARALAALRRWVTTGRPGLGAEDVRRHLRPPSDDDQRARLAAAIGIHLHRA GQTEAAAAYLEEAGRLAPHQVAIRRGTTRLRGADPFGQEYFDLRAELEANGVPIYRPLPDWQAEETSPAPPPPVEAAGSG CGGGGRSLVDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26757; Mature: 26626
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGIETVDVTVLEAGRTSLLHARVEPGGPGRSGRVLVRPAEGGGLLGWRLRPQGWCRGGV CCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCE CIPASVAARRLGVGERGLGAEDWIDEAGRLVRPPDTQTATDTFRSMNGIDSARALAALRR EECHHHHHHHHCCCCCCCCHHHHHHHCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHH WVTTGRPGLGAEDVRRHLRPPSDDDQRARLAAAIGIHLHRAGQTEAAAAYLEEAGRLAPH HHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHH QVAIRRGTTRLRGADPFGQEYFDLRAELEANGVPIYRPLPDWQAEETSPAPPPPVEAAGS HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCC GCGGGGRSLVDR CCCCCCCHHCCC >Mature Secondary Structure GGIETVDVTVLEAGRTSLLHARVEPGGPGRSGRVLVRPAEGGGLLGWRLRPQGWCRGGV CCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCE CIPASVAARRLGVGERGLGAEDWIDEAGRLVRPPDTQTATDTFRSMNGIDSARALAALRR EECHHHHHHHHCCCCCCCCHHHHHHHCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHH WVTTGRPGLGAEDVRRHLRPPSDDDQRARLAAAIGIHLHRAGQTEAAAAYLEEAGRLAPH HHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHH QVAIRRGTTRLRGADPFGQEYFDLRAELEANGVPIYRPLPDWQAEETSPAPPPPVEAAGS HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCC GCGGGGRSLVDR CCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA