| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317451
Identifier: 158317451
GI number: 158317451
Start: 6920571
End: 6921935
Strand: Reverse
Name: 158317451
Synonym: Franean1_5703
Alternate gene names: NA
Gene position: 6921935-6920571 (Counterclockwise)
Preceding gene: 158317452
Following gene: 158317448
Centisome position: 77.06
GC content: 72.6
Gene sequence:
>1365_bases GTGCTTCCACTGCTGGTGATTGCGCTGATCTCGCTCGCGTCCTGGATTTTCCTGGCGCTGTTCCGAGGATTCTTCTGGCG GACCGATCAAAGACTGCCCGCCGGCGACGGACCGCTACCGGAACAGTGGCCGGCGGTAGTCGCCGTGGTCCCCGCGCGTG ACGAGGCGGACGTCCTTCCCGACACGCTTCCCTCACTGCTCGCGCAGGACTATCCCGGGCGCCTGAGCATCATTCTGGTG GATGACGCCAGTACCGACGGGACGGGCGAGCTGGCCCGGGAGCTGGCGGCGCGGGCGGCGGCGGCCCGTCCCGAGGCGGC GGTGGCGCTCACCGTCATCGGGTCGAGCGAGCCGCCGGCCGGCTGGACGGGCAAGCTCTGGGCGTTGCGGCACGGCATCG CCGCGGCCGGCGCGCCCGAGTTCCTGCTGCTGACCGACGCCGACATCGCGCACGATCCGAGCTCGGTGCGCGAGCTCGTC CGGGCGGCGACGGCCCGCCGGCTTGATCTCGTCTCGCAGATGGCGCGGCTGCGGGTCAACACCGGATGGGAACGCCTCAT CGTGCCGGCCTTCGTCTACTTCTTCGCGATGCTCTACCCGTTCCGGTGGTCCAACGACCCGGACTCGCGGATCGCCGCCG CCGCCGGGGGATGCTCGCTCGTCCGCCGCCGGGCGCTCGCCGACGCCGGGGGGCTGGACGCCATCCGGGACGCGGTGATC GACGACGTCGCACTGGCCCGCGTGATCAAGAAGTCCGGCGGGCGGACCTGGCTCGGGCTCGCCGACCACGTCTCCAGTCG CCGGCCGTACCCGCGGCTGGCGGACCTGTGGCACATGGTGGCGCGCACCGCCTACGCGCAGTTGTTCTGGTCGCCGCTGC TACTCGTGGGCACGGTTCTCGGGCTCGGTTTGGTCTTCGTCGCCCCGGTCGTCGCGACCATCGCCGGCATCGCCGCCGGA AATGTGGCAGTGGCCGCCGCCGGGCTGCTCGCCTGGTCGGTCATGATCACGACGTTCGGACCGATGCTGCGGTACTACGA CCAGCCCGTGCTCTCCTCGCTCGCGCTGCCGTTCACCGCGGCCCTCTACCTGGCCATGACCATGGACTCGGCCCGGCGGC ACCGTGCCGGCCGGGGCGCGGCCTGGAAGGGGCGCACCTACTCAGCTCCCGACGGGAAGCGGGTCGGCCAGGGAGCCGGT CAGGACGCCGGCCAGGGAGTCGAGACGGCGGCGCAGGGCGAGGGCGTCGTCCGCCAGCGCGCAGACGAGGACCCCCGGTC CGGCCAGGGGCATCAGGGCGACACTGTCCCCTACCGCGGCGGTGACCGGCTCGAGACCGGTCGCCGGCCCGGCGACCAGG ACTGA
Upstream 100 bases:
>100_bases CGGACCCGGCTCACCGCATCCTGCCACATTAGTCGGACGGGTGCCCCTCGATTCTTTCTTCGGATACCGGCGGCGCCGGC TGTGTGGCATCCTCCCTGGC
Downstream 100 bases:
>100_bases CCCGACGGCACGGGCGCCGGCGAGTACCGCCGGCCCGGCCACCCCCGGGACGCGCGGGCCCAGCCGCAGCTCCTGGTGCA GCAGCGGCCGTCTCCGCGGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase; Hopene-Associated Glycosyltransferase HpnB; Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase Family 2 Protein; Integral Membrane Protein; HpnB Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyltransferase; Glycosyl Transferase Group 2 Family; TPR Domain-Containing Protein; Squalene-Phytoene Synthase
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MLPLLVIALISLASWIFLALFRGFFWRTDQRLPAGDGPLPEQWPAVVAVVPARDEADVLPDTLPSLLAQDYPGRLSIILV DDASTDGTGELARELAARAAAARPEAAVALTVIGSSEPPAGWTGKLWALRHGIAAAGAPEFLLLTDADIAHDPSSVRELV RAATARRLDLVSQMARLRVNTGWERLIVPAFVYFFAMLYPFRWSNDPDSRIAAAAGGCSLVRRRALADAGGLDAIRDAVI DDVALARVIKKSGGRTWLGLADHVSSRRPYPRLADLWHMVARTAYAQLFWSPLLLVGTVLGLGLVFVAPVVATIAGIAAG NVAVAAAGLLAWSVMITTFGPMLRYYDQPVLSSLALPFTAALYLAMTMDSARRHRAGRGAAWKGRTYSAPDGKRVGQGAG QDAGQGVETAAQGEGVVRQRADEDPRSGQGHQGDTVPYRGGDRLETGRRPGDQD
Sequences:
>Translated_454_residues MLPLLVIALISLASWIFLALFRGFFWRTDQRLPAGDGPLPEQWPAVVAVVPARDEADVLPDTLPSLLAQDYPGRLSIILV DDASTDGTGELARELAARAAAARPEAAVALTVIGSSEPPAGWTGKLWALRHGIAAAGAPEFLLLTDADIAHDPSSVRELV RAATARRLDLVSQMARLRVNTGWERLIVPAFVYFFAMLYPFRWSNDPDSRIAAAAGGCSLVRRRALADAGGLDAIRDAVI DDVALARVIKKSGGRTWLGLADHVSSRRPYPRLADLWHMVARTAYAQLFWSPLLLVGTVLGLGLVFVAPVVATIAGIAAG NVAVAAAGLLAWSVMITTFGPMLRYYDQPVLSSLALPFTAALYLAMTMDSARRHRAGRGAAWKGRTYSAPDGKRVGQGAG QDAGQGVETAAQGEGVVRQRADEDPRSGQGHQGDTVPYRGGDRLETGRRPGDQD >Mature_454_residues MLPLLVIALISLASWIFLALFRGFFWRTDQRLPAGDGPLPEQWPAVVAVVPARDEADVLPDTLPSLLAQDYPGRLSIILV DDASTDGTGELARELAARAAAARPEAAVALTVIGSSEPPAGWTGKLWALRHGIAAAGAPEFLLLTDADIAHDPSSVRELV RAATARRLDLVSQMARLRVNTGWERLIVPAFVYFFAMLYPFRWSNDPDSRIAAAAGGCSLVRRRALADAGGLDAIRDAVI DDVALARVIKKSGGRTWLGLADHVSSRRPYPRLADLWHMVARTAYAQLFWSPLLLVGTVLGLGLVFVAPVVATIAGIAAG NVAVAAAGLLAWSVMITTFGPMLRYYDQPVLSSLALPFTAALYLAMTMDSARRHRAGRGAAWKGRTYSAPDGKRVGQGAG QDAGQGVETAAQGEGVVRQRADEDPRSGQGHQGDTVPYRGGDRLETGRRPGDQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48464; Mature: 48464
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLLVIALISLASWIFLALFRGFFWRTDQRLPAGDGPLPEQWPAVVAVVPARDEADVLP CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCH DTLPSLLAQDYPGRLSIILVDDASTDGTGELARELAARAAAARPEAAVALTVIGSSEPPA HHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC GWTGKLWALRHGIAAAGAPEFLLLTDADIAHDPSSVRELVRAATARRLDLVSQMARLRVN CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC TGWERLIVPAFVYFFAMLYPFRWSNDPDSRIAAAAGGCSLVRRRALADAGGLDAIRDAVI CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHH DDVALARVIKKSGGRTWLGLADHVSSRRPYPRLADLWHMVARTAYAQLFWSPLLLVGTVL HHHHHHHHHHHCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGLVFVAPVVATIAGIAAGNVAVAAAGLLAWSVMITTFGPMLRYYDQPVLSSLALPFTA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH ALYLAMTMDSARRHRAGRGAAWKGRTYSAPDGKRVGQGAGQDAGQGVETAAQGEGVVRQR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHCCCCHHHHH ADEDPRSGQGHQGDTVPYRGGDRLETGRRPGDQD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLPLLVIALISLASWIFLALFRGFFWRTDQRLPAGDGPLPEQWPAVVAVVPARDEADVLP CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCH DTLPSLLAQDYPGRLSIILVDDASTDGTGELARELAARAAAARPEAAVALTVIGSSEPPA HHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC GWTGKLWALRHGIAAAGAPEFLLLTDADIAHDPSSVRELVRAATARRLDLVSQMARLRVN CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC TGWERLIVPAFVYFFAMLYPFRWSNDPDSRIAAAAGGCSLVRRRALADAGGLDAIRDAVI CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHH DDVALARVIKKSGGRTWLGLADHVSSRRPYPRLADLWHMVARTAYAQLFWSPLLLVGTVL HHHHHHHHHHHCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGLVFVAPVVATIAGIAAGNVAVAAAGLLAWSVMITTFGPMLRYYDQPVLSSLALPFTA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH ALYLAMTMDSARRHRAGRGAAWKGRTYSAPDGKRVGQGAGQDAGQGVETAAQGEGVVRQR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHCCCCHHHHH ADEDPRSGQGHQGDTVPYRGGDRLETGRRPGDQD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA