| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317412
Identifier: 158317412
GI number: 158317412
Start: 6875243
End: 6875680
Strand: Direct
Name: 158317412
Synonym: Franean1_5663
Alternate gene names: NA
Gene position: 6875243-6875680 (Clockwise)
Preceding gene: 158317411
Following gene: 158317413
Centisome position: 76.54
GC content: 73.74
Gene sequence:
>438_bases GTGGACGAGCAGACCGCAGCCGCCGCCGGAGCGCGACCTACGTCGCGCCTCGTCGTCGATGTCGTGCGAGCGCTGCGGGG GTGGGTGGTCGCGGCGGCGGGCGGAGTCCTGCTACTGGGGTGCTACCTGGGAGTCTCCAAGGAGACCGACGTGGCCTACC AGCTGCCGTACGTCGTGTCCGGCGGTTTCGGCGGGCTTGCGCTCGTCCTCGTGGGCAGTGCCCTGCTGATCGCCGACCGG GTCGACGCGACGCAGGCCGCGCAGAACCGGCTCGCCGGCCAGGTCGACGACCTGCACACGCTGATCATCGCGGCCGCCGC CAGCGGCGCGGCGAATGGGGAGCACACCGGCGCCGGCGGCCACCCCGGTCAGCCCGCCATGTCGAACCACACCGGCGCCA CCGAGATCAGCACCGCCGCGCCCGGCCAGCGGTACTGA
Upstream 100 bases:
>100_bases TGGCGGCTGTCGTCGGGGATTCACAGCGAGGCACGCTGGACGTGCCCCGCGGCGCGTCACGGCGACGGGCACAGCCGACA CGCTCCTTGGGGGAGACGAA
Downstream 100 bases:
>100_bases GCGGGCCCGGGGCGACACCATGGGCACTGAAACCATGGGCACTGAAACCATGGGCACCGACACCATGGGCACCGTCGACA CCCTTCCCGGGGTGACCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MDEQTAAAAGARPTSRLVVDVVRALRGWVVAAAGGVLLLGCYLGVSKETDVAYQLPYVVSGGFGGLALVLVGSALLIADR VDATQAAQNRLAGQVDDLHTLIIAAAASGAANGEHTGAGGHPGQPAMSNHTGATEISTAAPGQRY
Sequences:
>Translated_145_residues MDEQTAAAAGARPTSRLVVDVVRALRGWVVAAAGGVLLLGCYLGVSKETDVAYQLPYVVSGGFGGLALVLVGSALLIADR VDATQAAQNRLAGQVDDLHTLIIAAAASGAANGEHTGAGGHPGQPAMSNHTGATEISTAAPGQRY >Mature_145_residues MDEQTAAAAGARPTSRLVVDVVRALRGWVVAAAGGVLLLGCYLGVSKETDVAYQLPYVVSGGFGGLALVLVGSALLIADR VDATQAAQNRLAGQVDDLHTLIIAAAASGAANGEHTGAGGHPGQPAMSNHTGATEISTAAPGQRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14474; Mature: 14474
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEQTAAAAGARPTSRLVVDVVRALRGWVVAAAGGVLLLGCYLGVSKETDVAYQLPYVVS CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCEEEE GGFGGLALVLVGSALLIADRVDATQAAQNRLAGQVDDLHTLIIAAAASGAANGEHTGAGG CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCC HPGQPAMSNHTGATEISTAAPGQRY CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDEQTAAAAGARPTSRLVVDVVRALRGWVVAAAGGVLLLGCYLGVSKETDVAYQLPYVVS CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCEEEE GGFGGLALVLVGSALLIADRVDATQAAQNRLAGQVDDLHTLIIAAAASGAANGEHTGAGG CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCC HPGQPAMSNHTGATEISTAAPGQRY CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA