Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is livM [C]

Identifier: 158317413

GI number: 158317413

Start: 6875780

End: 6878005

Strand: Direct

Name: livM [C]

Synonym: Franean1_5664

Alternate gene names: 158317413

Gene position: 6875780-6878005 (Clockwise)

Preceding gene: 158317412

Following gene: 158317414

Centisome position: 76.55

GC content: 72.73

Gene sequence:

>2226_bases
ATGACCAGTATCGATCTTGCTCTCGCCGGCATCTCCATCGGGGCCATCGCGGCCCTCTCCGGCATCGGGCTGCTTGTCAC
CTACCGCACCAACGGCGTTCTCAACCTCGCGCAGGGCGGAATCGCGACCCTGGTCGCGTACGTGTTCCGCGAGATGGTCG
TCGAGTGGGACCTGCCGATCTGGCTGGCCGCGGTGATCGCCCTCGGCATCCTCTCCCCCGGCATCGGGCTTCTACTCGAA
CGGCTCGTGTTCCGCCCGCTCGCCCGTCGACGCGCCTCCGCCGCCGAGTCGCTGGTCGCGAGCCTCGGCGTCCTGGTCCT
CACGCTCGGCATGACGGCCGGCATCTGGGGCCTGGGCTCCCGCAGCGACGCGCCGAGTATCTTCCCGAACGAGTCGGTCA
CGATCTTCGGTGACACCCGCATCGGCGTCGACGCCCTGGCCGAGCTGGCCATGGTCGTCGCGTTCTGCATCGTGCTCGGG
CTCATCGCGGCGAAGACGAAGTTCGGCCGCCAGATCCGGGCCGTCGTCGACGACCGCCAGCTCGCCGAGCTCTCCGGCGT
GCCCGCCGACCGGGTCGCCGCGGCCGGGTGGGCGCTGGGCACCACGATGGCCGGCCTCACCGGCATCCTGCTGGCGCCCC
GGTTCCAGCTCAACCCGTACGGGCTGACGCTGCTCGTCCTGGAGACGTTCGCCGTCGTCGTGGCCGCCCGGCTGTCGAGC
ATGCCAGTGGCGGTGCTGACCGCGCTGGGCATCGCCGTCCTGCAGAGCGAGCTCAAGCAGTTCACCCTCGAGGGCGACGC
CGGCCAGATCCTCATCGTTCTGCAGTCCAACCTGTTCATCTTCGCGCTGCTGGTGCTGCTGCTCGTGGTACCCAAGCTGC
GCGAGCTGGGCAACGGCGACTCCGGCTCGACCGGGAGCTTCTCCAGCCGGGGCGCTCCCCCCGCCGGCCCGGTCAGCCGG
CACGACGCCCGGCGCGACATCCTCGGCAAGCTCGGCGGCGCCGCGCTGCTGCTGGCCCCGCTGACCTTCGCCCCGGCCGA
CCTGCGCTCGGCGTTCATGGTGCCCGCCCTGGCCCTGATCTTCCTCTCGCTGGTGATCCTCACCGGCTACAGCGGCCAGC
TCTCCCTCGGCGTCGCCGGCTACGCGGGCCTGGGCGCCCTGCTCACCCTCAAGCTCGCCAACGGCGACCTGTTCGGCATC
CCGGCGATCCCCGGCATGTGGGCGATGTTCCTGGGCGCGCTGCTGGTCGCGCCGATCGGACTGATCACCGGGTGGCCGGC
GATCCGCCGGCGCGGGCTGACTCTCGCGCTGACGACCTTCGCGGTCGGCGCGGTCGTGAGCCGCTTCGTCTTCGAGCAGC
CGACCTTCGCGACCGGCCTGTACGTCGACCCGCTGACGTTCTTCGGCTCCGAACTGACCGACGAGGCCTTCTACATCTTC
GAGCTGGTCTGCCTGGCCATCGGCCTGCTGGTTGTGCGCAACCTGCACCACGGCCGGCTCGGCCGGGCCCTGCTCGCCGT
CCGCGACCACACCGAGGGCGCCGCGGCGGTCGGGGTGGACGTCCGCAACCTCAAACTGCTCGCGTTCACCGTCTCCTCGG
TCGTGGCCGGCCTCGGCGGCGGGCTGCTGACCTTCAGCTCCTCCTCGTTCTCGGCGGACGACTTCGCGCCGTTGCAGAGC
CTGCTGTGGTTCACCGCCGTGATCGTCTTCGGTGCCGACAGCGCCGCCGGGGCGATCATCGCGGCGGCGTTCATCGTCAC
CATCGACGTGCTGGCCCCGGCCGGCTCGTCGATCCTCGCGGTCGGCATCCTCGCCCTGGCGCTGGGCTGGATGCCCGGCG
GCCTCGCGTCCGCGGTCCGGGCCGGCTTCGCGCTGGTCGCCCGCACGCTGGCCGACGAGTTCGTCCCCGCGCCGCGGCCC
ACCCGCCATGCCAGCGCCCGTCTCGCCGCGGGCGGCGCCGCGGGCCACGTGCCCGGTGTCCCGGGCGCCGGCGGCGGAGC
GGCTCTCGGCGAGCTGCGGATCGTGCTGCCGCCGGGAGCACCGGCACCGACCGCCTTCGGCGCGGCGCTGCTGAGCGCGG
TCGCCGCACACGCCGCCCGCACCGGGCTGAGCCTGGACGCGCTGCCGAGCGCCCGCACGGCGGCGGACGACTCCACAGAC
GGCCGGGAGCTGGTCGGGCACCGACCGCACCTGCCCGGATACCCGGTCGAGAGAGGCGCGTCATGA

Upstream 100 bases:

>100_bases
AGCGGGCCCGGGGCGACACCATGGGCACTGAAACCATGGGCACTGAAACCATGGGCACCGACACCATGGGCACCGTCGAC
ACCCTTCCCGGGGTGACCGG

Downstream 100 bases:

>100_bases
GCCGCGACGATCTGCGGGCCCGTGGCCTGGTCCGCCGCTACGGCGGGCTGACAGCCGTCGAGCATGTCGACATGGACGTG
CCCAGCGGCCAGGTCACCGG

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Related Protein; ABC Transporter ; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter Permease Protein; LOW QUALITY PROTEIN ABC Transporter Permease; Branched-Chain Amino Acid ABC Transporter Permease Protein; Branched-Chain Amino Acid Transport System Permease; ABC Transporter Permease Protein ATPase; Amino Acid/Amide ABC Transporter Membrane HAAT Family; ABC Transporter Subunit; Branched Chain Amino Acid ABC Transporter Permease

Number of amino acids: Translated: 741; Mature: 740

Protein sequence:

>741_residues
MTSIDLALAGISIGAIAALSGIGLLVTYRTNGVLNLAQGGIATLVAYVFREMVVEWDLPIWLAAVIALGILSPGIGLLLE
RLVFRPLARRRASAAESLVASLGVLVLTLGMTAGIWGLGSRSDAPSIFPNESVTIFGDTRIGVDALAELAMVVAFCIVLG
LIAAKTKFGRQIRAVVDDRQLAELSGVPADRVAAAGWALGTTMAGLTGILLAPRFQLNPYGLTLLVLETFAVVVAARLSS
MPVAVLTALGIAVLQSELKQFTLEGDAGQILIVLQSNLFIFALLVLLLVVPKLRELGNGDSGSTGSFSSRGAPPAGPVSR
HDARRDILGKLGGAALLLAPLTFAPADLRSAFMVPALALIFLSLVILTGYSGQLSLGVAGYAGLGALLTLKLANGDLFGI
PAIPGMWAMFLGALLVAPIGLITGWPAIRRRGLTLALTTFAVGAVVSRFVFEQPTFATGLYVDPLTFFGSELTDEAFYIF
ELVCLAIGLLVVRNLHHGRLGRALLAVRDHTEGAAAVGVDVRNLKLLAFTVSSVVAGLGGGLLTFSSSSFSADDFAPLQS
LLWFTAVIVFGADSAAGAIIAAAFIVTIDVLAPAGSSILAVGILALALGWMPGGLASAVRAGFALVARTLADEFVPAPRP
TRHASARLAAGGAAGHVPGVPGAGGGAALGELRIVLPPGAPAPTAFGAALLSAVAAHAARTGLSLDALPSARTAADDSTD
GRELVGHRPHLPGYPVERGAS

Sequences:

>Translated_741_residues
MTSIDLALAGISIGAIAALSGIGLLVTYRTNGVLNLAQGGIATLVAYVFREMVVEWDLPIWLAAVIALGILSPGIGLLLE
RLVFRPLARRRASAAESLVASLGVLVLTLGMTAGIWGLGSRSDAPSIFPNESVTIFGDTRIGVDALAELAMVVAFCIVLG
LIAAKTKFGRQIRAVVDDRQLAELSGVPADRVAAAGWALGTTMAGLTGILLAPRFQLNPYGLTLLVLETFAVVVAARLSS
MPVAVLTALGIAVLQSELKQFTLEGDAGQILIVLQSNLFIFALLVLLLVVPKLRELGNGDSGSTGSFSSRGAPPAGPVSR
HDARRDILGKLGGAALLLAPLTFAPADLRSAFMVPALALIFLSLVILTGYSGQLSLGVAGYAGLGALLTLKLANGDLFGI
PAIPGMWAMFLGALLVAPIGLITGWPAIRRRGLTLALTTFAVGAVVSRFVFEQPTFATGLYVDPLTFFGSELTDEAFYIF
ELVCLAIGLLVVRNLHHGRLGRALLAVRDHTEGAAAVGVDVRNLKLLAFTVSSVVAGLGGGLLTFSSSSFSADDFAPLQS
LLWFTAVIVFGADSAAGAIIAAAFIVTIDVLAPAGSSILAVGILALALGWMPGGLASAVRAGFALVARTLADEFVPAPRP
TRHASARLAAGGAAGHVPGVPGAGGGAALGELRIVLPPGAPAPTAFGAALLSAVAAHAARTGLSLDALPSARTAADDSTD
GRELVGHRPHLPGYPVERGAS
>Mature_740_residues
TSIDLALAGISIGAIAALSGIGLLVTYRTNGVLNLAQGGIATLVAYVFREMVVEWDLPIWLAAVIALGILSPGIGLLLER
LVFRPLARRRASAAESLVASLGVLVLTLGMTAGIWGLGSRSDAPSIFPNESVTIFGDTRIGVDALAELAMVVAFCIVLGL
IAAKTKFGRQIRAVVDDRQLAELSGVPADRVAAAGWALGTTMAGLTGILLAPRFQLNPYGLTLLVLETFAVVVAARLSSM
PVAVLTALGIAVLQSELKQFTLEGDAGQILIVLQSNLFIFALLVLLLVVPKLRELGNGDSGSTGSFSSRGAPPAGPVSRH
DARRDILGKLGGAALLLAPLTFAPADLRSAFMVPALALIFLSLVILTGYSGQLSLGVAGYAGLGALLTLKLANGDLFGIP
AIPGMWAMFLGALLVAPIGLITGWPAIRRRGLTLALTTFAVGAVVSRFVFEQPTFATGLYVDPLTFFGSELTDEAFYIFE
LVCLAIGLLVVRNLHHGRLGRALLAVRDHTEGAAAVGVDVRNLKLLAFTVSSVVAGLGGGLLTFSSSSFSADDFAPLQSL
LWFTAVIVFGADSAAGAIIAAAFIVTIDVLAPAGSSILAVGILALALGWMPGGLASAVRAGFALVARTLADEFVPAPRPT
RHASARLAAGGAAGHVPGVPGAGGGAALGELRIVLPPGAPAPTAFGAALLSAVAAHAARTGLSLDALPSARTAADDSTDG
RELVGHRPHLPGYPVERGAS

Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75769; Mature: 75638

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIDLALAGISIGAIAALSGIGLLVTYRTNGVLNLAQGGIATLVAYVFREMVVEWDLPI
CCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEHHCCCHHHHHHHHHHHHHHHCCCHH
WLAAVIALGILSPGIGLLLERLVFRPLARRRASAAESLVASLGVLVLTLGMTAGIWGLGS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RSDAPSIFPNESVTIFGDTRIGVDALAELAMVVAFCIVLGLIAAKTKFGRQIRAVVDDRQ
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAELSGVPADRVAAAGWALGTTMAGLTGILLAPRFQLNPYGLTLLVLETFAVVVAARLSS
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHC
MPVAVLTALGIAVLQSELKQFTLEGDAGQILIVLQSNLFIFALLVLLLVVPKLRELGNGD
CHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCC
SGSTGSFSSRGAPPAGPVSRHDARRDILGKLGGAALLLAPLTFAPADLRSAFMVPALALI
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
FLSLVILTGYSGQLSLGVAGYAGLGALLTLKLANGDLFGIPAIPGMWAMFLGALLVAPIG
HHHHHHHCCCCCCEEECCCCHHHHCEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHH
LITGWPAIRRRGLTLALTTFAVGAVVSRFVFEQPTFATGLYVDPLTFFGSELTDEAFYIF
HHHCCHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHCCHHCHHHHHHH
ELVCLAIGLLVVRNLHHGRLGRALLAVRDHTEGAAAVGVDVRNLKLLAFTVSSVVAGLGG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCC
GLLTFSSSSFSADDFAPLQSLLWFTAVIVFGADSAAGAIIAAAFIVTIDVLAPAGSSILA
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
VGILALALGWMPGGLASAVRAGFALVARTLADEFVPAPRPTRHASARLAAGGAAGHVPGV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCC
PGAGGGAALGELRIVLPPGAPAPTAFGAALLSAVAAHAARTGLSLDALPSARTAADDSTD
CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GRELVGHRPHLPGYPVERGAS
CHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSIDLALAGISIGAIAALSGIGLLVTYRTNGVLNLAQGGIATLVAYVFREMVVEWDLPI
CCHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEHHCCCHHHHHHHHHHHHHHHCCCHH
WLAAVIALGILSPGIGLLLERLVFRPLARRRASAAESLVASLGVLVLTLGMTAGIWGLGS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RSDAPSIFPNESVTIFGDTRIGVDALAELAMVVAFCIVLGLIAAKTKFGRQIRAVVDDRQ
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAELSGVPADRVAAAGWALGTTMAGLTGILLAPRFQLNPYGLTLLVLETFAVVVAARLSS
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHC
MPVAVLTALGIAVLQSELKQFTLEGDAGQILIVLQSNLFIFALLVLLLVVPKLRELGNGD
CHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCC
SGSTGSFSSRGAPPAGPVSRHDARRDILGKLGGAALLLAPLTFAPADLRSAFMVPALALI
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
FLSLVILTGYSGQLSLGVAGYAGLGALLTLKLANGDLFGIPAIPGMWAMFLGALLVAPIG
HHHHHHHCCCCCCEEECCCCHHHHCEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHH
LITGWPAIRRRGLTLALTTFAVGAVVSRFVFEQPTFATGLYVDPLTFFGSELTDEAFYIF
HHHCCHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHCCHHCHHHHHHH
ELVCLAIGLLVVRNLHHGRLGRALLAVRDHTEGAAAVGVDVRNLKLLAFTVSSVVAGLGG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCC
GLLTFSSSSFSADDFAPLQSLLWFTAVIVFGADSAAGAIIAAAFIVTIDVLAPAGSSILA
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
VGILALALGWMPGGLASAVRAGFALVARTLADEFVPAPRPTRHASARLAAGGAAGHVPGV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCC
PGAGGGAALGELRIVLPPGAPAPTAFGAALLSAVAAHAARTGLSLDALPSARTAADDSTD
CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GRELVGHRPHLPGYPVERGAS
CHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA