| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is murI
Identifier: 158317397
GI number: 158317397
Start: 6861682
End: 6862512
Strand: Direct
Name: murI
Synonym: Franean1_5648
Alternate gene names: 158317397
Gene position: 6861682-6862512 (Clockwise)
Preceding gene: 158317395
Following gene: 158317398
Centisome position: 76.39
GC content: 69.92
Gene sequence:
>831_bases ATGAGCGGCGCGCCCATCGGGGTGTTCGACAGTGGAGTCGGCGGTCTCACCGTTGCGCGCGCGATCCTGGACCAGCTGCC AGGAGAGTCGCTGCTCTACATCGGCGACACCGCGCACGCCCCCTACGGGCCGCGACCGATTGCCGAGGTGCGCCGGTACG CCCTCGCCGCACTGGACGAACTCGTCTCCGCGGGTGTGAAACTTCTTGTCATCGCGTGCAATTCCGCGAGCGCGGCATGC CTGCGCGATGCCCGGGAACGCTACGACGTACCGGTGGTCGAGGTCATCGTGCCCGCGACCCGCCGTGCCGTCGCGGCAAC ACGGAGTGGTCGAGTGGGAGTCATCGGAACGGTCGCCACGATCACCAGCCGGGCCTACGAGGACGCCTTCGCGGCGGCCG CGGGCACCGAGCTGGTCAGCGTGGCGTGCCCGGCCTTCGTCGATTTCGTCGAGCGCGGCATCACGTCCGGCCGGCAGTTG CTGGGACTCACCGAGGCGTATCTGGCACCGTTGCAGGAAGCCGACGTCGACACAGTGATTCTCGGATGCACCCACTATCC ACTGTTGACCGGCGTCATCGGTCTCGTCATGGGAGAGGGCGTCACACTGGTGAGCAGCGCCGAGGAGACGGCCAAGGACA CCTACCGGGTGCTCGCCCGCGACGGCCTCTTCCGCGACCCCGACCTGCCGCCCCCGGCGCATCGCTTCCTGACCACCGGT GATCCCGCCGCGTTCGCGCGGGTGGGCCGCCGTTTCCTGGGCCCCGAGATCACGGCGGTGAGCATCGCCCCGGCGGCGGC CCCCCGGCAGGCACAGGCGGTGGGACGATGA
Upstream 100 bases:
>100_bases CGGGCATGTCCGCGACGAGACGCCTGTCCGGGATCGGACATTGGTTTCGTGATGACAGCCACAGGGTGAGCAGCAGGTTT CCGGCTTAGTCTCATCGCTC
Downstream 100 bases:
>100_bases AACTGACGATCCTGGGCTGTTCCGGCACCTACCCGGGCCCCGCTTCGGCCTGCTCCTCCTACCTGATCGAGGACGAGGGC TTCCGGCTCGTCCTGGACGC
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSGAPIGVFDSGVGGLTVARAILDQLPGESLLYIGDTAHAPYGPRPIAEVRRYALAALDELVSAGVKLLVIACNSASAAC LRDARERYDVPVVEVIVPATRRAVAATRSGRVGVIGTVATITSRAYEDAFAAAAGTELVSVACPAFVDFVERGITSGRQL LGLTEAYLAPLQEADVDTVILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLARDGLFRDPDLPPPAHRFLTTG DPAAFARVGRRFLGPEITAVSIAPAAAPRQAQAVGR
Sequences:
>Translated_276_residues MSGAPIGVFDSGVGGLTVARAILDQLPGESLLYIGDTAHAPYGPRPIAEVRRYALAALDELVSAGVKLLVIACNSASAAC LRDARERYDVPVVEVIVPATRRAVAATRSGRVGVIGTVATITSRAYEDAFAAAAGTELVSVACPAFVDFVERGITSGRQL LGLTEAYLAPLQEADVDTVILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLARDGLFRDPDLPPPAHRFLTTG DPAAFARVGRRFLGPEITAVSIAPAAAPRQAQAVGR >Mature_275_residues SGAPIGVFDSGVGGLTVARAILDQLPGESLLYIGDTAHAPYGPRPIAEVRRYALAALDELVSAGVKLLVIACNSASAACL RDARERYDVPVVEVIVPATRRAVAATRSGRVGVIGTVATITSRAYEDAFAAAAGTELVSVACPAFVDFVERGITSGRQLL GLTEAYLAPLQEADVDTVILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLARDGLFRDPDLPPPAHRFLTTGD PAAFARVGRRFLGPEITAVSIAPAAAPRQAQAVGR
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family
Homologues:
Organism=Escherichia coli, GI87082355, Length=221, Percent_Identity=34.3891402714932, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURI_FRASN (A8L764)
Other databases:
- EMBL: CP000820 - RefSeq: YP_001509905.1 - ProteinModelPortal: A8L764 - SMR: A8L764 - GeneID: 5673975 - GenomeReviews: CP000820_GR - KEGG: fre:Franean1_5648 - HOGENOM: HBG645102 - OMA: AILGCTH - ProtClustDB: PRK00865 - BioCyc: FSP1855:FRANEAN1_5648-MONOMER - HAMAP: MF_00258 - InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 - Gene3D: G3DSA:3.40.50.1860 - TIGRFAMs: TIGR00067
Pfam domain/function: PF01177 Asp_Glu_race; SSF53681 Asp/Glu_race
EC number: =5.1.1.3
Molecular weight: Translated: 28708; Mature: 28577
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00923 ASP_GLU_RACEMASE_1; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAPIGVFDSGVGGLTVARAILDQLPGESLLYIGDTAHAPYGPRPIAEVRRYALAALDE CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH LVSAGVKLLVIACNSASAACLRDARERYDVPVVEVIVPATRRAVAATRSGRVGVIGTVAT HHHCCEEEEEEEECCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCEEEEEHHHH ITSRAYEDAFAAAAGTELVSVACPAFVDFVERGITSGRQLLGLTEAYLAPLQEADVDTVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCEEE LGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLARDGLFRDPDLPPPAHRFLTTG ECCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCC DPAAFARVGRRFLGPEITAVSIAPAAAPRQAQAVGR CHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCC >Mature Secondary Structure SGAPIGVFDSGVGGLTVARAILDQLPGESLLYIGDTAHAPYGPRPIAEVRRYALAALDE CCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH LVSAGVKLLVIACNSASAACLRDARERYDVPVVEVIVPATRRAVAATRSGRVGVIGTVAT HHHCCEEEEEEEECCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCEEEEEHHHH ITSRAYEDAFAAAAGTELVSVACPAFVDFVERGITSGRQLLGLTEAYLAPLQEADVDTVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCEEE LGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLARDGLFRDPDLPPPAHRFLTTG ECCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCC DPAAFARVGRRFLGPEITAVSIAPAAAPRQAQAVGR CHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA