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The map label for this gene is rnz [C]

Identifier: 158317398

GI number: 158317398

Start: 6862509

End: 6863255

Strand: Direct

Name: rnz [C]

Synonym: Franean1_5649

Alternate gene names: 158317398

Gene position: 6862509-6863255 (Clockwise)

Preceding gene: 158317397

Following gene: 158317399

Centisome position: 76.4

GC content: 71.08

Gene sequence:

>747_bases
ATGAAACTGACGATCCTGGGCTGTTCCGGCACCTACCCGGGCCCCGCTTCGGCCTGCTCCTCCTACCTGATCGAGGACGA
GGGCTTCCGGCTCGTCCTGGACGCCGGCAACGGCTCCATGGGTGAGCTGCAACGGCACTGCGACATCCGGGACGTCGACG
CGGTGCTGCTGAGCCACCTGCACGGCGACCACTGCCTCGACCTGGTCGCGACGTCCTACGCCCGGCGCTACCACCCGGAG
GGGATGCCGCCCAAGCTCCCGGTGTACGGGCCGATCAACACCCAGGAGCGGCTGTGCGGCGCGTTCGAGCGCTGGCCGGA
CGACTCCCTGGCCGACATCTACGACTTCCGCACGATCGGTCCCGGCCGCCTGCACGTCGGGCCGTTCGCCATCGACCTGG
CCCGGGTCGCGCACCCGATCGAGGCCTACGGGGTGCGGGTGACGGCCGGCGGGAAGACGCTCACCTACTCCGGCGACACC
GGGGTGTGCGACCGGCTCGTCCGGCTGGCCCACGACAGCGACCTGTTCCTGTGCGAGGCGTCGTTCCTCGACGGCGAGGA
CAACCCGCCCGACCTGCACCTGACCGGCAAGGACGCCGGTGAGCACGCGACCCGCGCCGGTGTCGGGCGGCTGGTGCTGA
CCCACCTCGTGCCCTGGGGCAACGTGGAACGCACCCACGGCGAGGCCGCGGGCGCGTTCGACGGCGATCTGACACTCGCG
AGCACCGGCACCTCCTACGAGATCTGA

Upstream 100 bases:

>100_bases
CCGCGTTCGCGCGGGTGGGCCGCCGTTTCCTGGGCCCCGAGATCACGGCGGTGAGCATCGCCCCGGCGGCGGCCCCCCGG
CAGGCACAGGCGGTGGGACG

Downstream 100 bases:

>100_bases
ACACGTCTGAGCACGTCTGAGCACGCACGCGGGCCGTCCGGCGCAACCCCGGCCGGCCTGCGCCGATAGGGTCTCCTCCC
GTGATCAGAGTCGATGGCAG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKLTILGCSGTYPGPASACSSYLIEDEGFRLVLDAGNGSMGELQRHCDIRDVDAVLLSHLHGDHCLDLVATSYARRYHPE
GMPPKLPVYGPINTQERLCGAFERWPDDSLADIYDFRTIGPGRLHVGPFAIDLARVAHPIEAYGVRVTAGGKTLTYSGDT
GVCDRLVRLAHDSDLFLCEASFLDGEDNPPDLHLTGKDAGEHATRAGVGRLVLTHLVPWGNVERTHGEAAGAFDGDLTLA
STGTSYEI

Sequences:

>Translated_248_residues
MKLTILGCSGTYPGPASACSSYLIEDEGFRLVLDAGNGSMGELQRHCDIRDVDAVLLSHLHGDHCLDLVATSYARRYHPE
GMPPKLPVYGPINTQERLCGAFERWPDDSLADIYDFRTIGPGRLHVGPFAIDLARVAHPIEAYGVRVTAGGKTLTYSGDT
GVCDRLVRLAHDSDLFLCEASFLDGEDNPPDLHLTGKDAGEHATRAGVGRLVLTHLVPWGNVERTHGEAAGAFDGDLTLA
STGTSYEI
>Mature_248_residues
MKLTILGCSGTYPGPASACSSYLIEDEGFRLVLDAGNGSMGELQRHCDIRDVDAVLLSHLHGDHCLDLVATSYARRYHPE
GMPPKLPVYGPINTQERLCGAFERWPDDSLADIYDFRTIGPGRLHVGPFAIDLARVAHPIEAYGVRVTAGGKTLTYSGDT
GVCDRLVRLAHDSDLFLCEASFLDGEDNPPDLHLTGKDAGEHATRAGVGRLVLTHLVPWGNVERTHGEAAGAFDGDLTLA
STGTSYEI

Specific function: Zinc Phosphodiesterase, Which Displays Some Trna 3'- Processing Endonuclease Activity. Probably Involved In Trna Maturation, By Removing A 3'Trailer From Precursor Trna. [C]

COG id: COG1234

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the atsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: NA

EC number: 3.1.26.11 [C]

Molecular weight: Translated: 26700; Mature: 26700

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTILGCSGTYPGPASACSSYLIEDEGFRLVLDAGNGSMGELQRHCDIRDVDAVLLSHL
CEEEEEECCCCCCCHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHH
HGDHCLDLVATSYARRYHPEGMPPKLPVYGPINTQERLCGAFERWPDDSLADIYDFRTIG
CCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC
PGRLHVGPFAIDLARVAHPIEAYGVRVTAGGKTLTYSGDTGVCDRLVRLAHDSDLFLCEA
CCEEEECHHHHHHHHHHCCHHHHEEEEEECCEEEEECCCCHHHHHHHHHHCCCCEEEEEE
SFLDGEDNPPDLHLTGKDAGEHATRAGVGRLVLTHLVPWGNVERTHGEAAGAFDGDLTLA
EECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
STGTSYEI
ECCCCCCC
>Mature Secondary Structure
MKLTILGCSGTYPGPASACSSYLIEDEGFRLVLDAGNGSMGELQRHCDIRDVDAVLLSHL
CEEEEEECCCCCCCHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHH
HGDHCLDLVATSYARRYHPEGMPPKLPVYGPINTQERLCGAFERWPDDSLADIYDFRTIG
CCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC
PGRLHVGPFAIDLARVAHPIEAYGVRVTAGGKTLTYSGDTGVCDRLVRLAHDSDLFLCEA
CCEEEECHHHHHHHHHHCCHHHHEEEEEECCEEEEECCCCHHHHHHHHHHCCCCEEEEEE
SFLDGEDNPPDLHLTGKDAGEHATRAGVGRLVLTHLVPWGNVERTHGEAAGAFDGDLTLA
EECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
STGTSYEI
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]