| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317382
Identifier: 158317382
GI number: 158317382
Start: 6848173
End: 6848859
Strand: Direct
Name: 158317382
Synonym: Franean1_5633
Alternate gene names: NA
Gene position: 6848173-6848859 (Clockwise)
Preceding gene: 158317381
Following gene: 158317383
Centisome position: 76.24
GC content: 73.36
Gene sequence:
>687_bases ATGACCGGGACCACAGCCGCCGGGGGGGCCACCGGGTCCGTTGCTTCCGGAGACGCAGGGGACGCCGGGACACCGCGCAC GCGTCGGTTCGCCCGCCTGGCCAGCACCGTCCTGCGGGTCGGCCTCGGCATCCTCTGGCTCGCCGCGGGCGCGCTGAAGA TCAACGACCCGGACGGCATGGTGCGGTCCGTCCGCGCGTTCCGGATCCTGCCCGAAGCGCTGGTGGACCCGGTCGCCTAC GCCGTGCCGTTCGTGGAGATCGCGCTCGGCGTGCTGCTGATCGTCGGCCTCACCGTCCGGCTGGCCGCCGCCATCTCGGC GGTGCTGTTCGCCGTCTACATCGCGGCGATCGCGTCGGCGGCCGCCCGCGGCCTGCGCATCGACTGCGGCTGCTTCTCCG CGGGCGGCGATCTGACGTCCGAGGCACCCACGCACTACACCCAGGAGATCGTTCGCGACAGCGCGCTGCTGCTGGCCAGC CTGCTGCTGGCGCGGTGGCCCGCGGGCTACCTGTCGGTCGACCGGCTCCTGAACGGACCAGCACGACAGCCCTCGACGAC GAGGACGACCTTCTCGGGAGTACCCATGGCATCGCGGACGAGGAAGACATCGCGGACGTCGGCGCCGCCCGGCCGTAGCT CCGGCGGCAGCACGCCCGGCGCCCCTCAGGATCGGGGCCACGCGTGA
Upstream 100 bases:
>100_bases CACCAGGGGCGACCGGGTCGCCTGGGACAGCAGGGACAGCAGGGACGACGAACGCCGTCCAGACAACCGGCGACAGCCGG CCGGCCCGGATCGCCGCAGG
Downstream 100 bases:
>100_bases CGGCCGCGGAGCGGCGGGAGAAGGTCGCGGCGGCCCGGGCGGCGGCGGCCGCCCGGGAACGACGGCGCAGGCAGCTCATC ATCGGCTCGGTCGTCGCCGC
Product: DoxX family protein
Products: NA
Alternate protein names: Methylamine Utilization MauE; Methylamine Utilization Protein; DoxX Protein; Methylamine Utilization Protein Maue
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTGTTAAGGATGSVASGDAGDAGTPRTRRFARLASTVLRVGLGILWLAAGALKINDPDGMVRSVRAFRILPEALVDPVAY AVPFVEIALGVLLIVGLTVRLAAAISAVLFAVYIAAIASAAARGLRIDCGCFSAGGDLTSEAPTHYTQEIVRDSALLLAS LLLARWPAGYLSVDRLLNGPARQPSTTRTTFSGVPMASRTRKTSRTSAPPGRSSGGSTPGAPQDRGHA
Sequences:
>Translated_228_residues MTGTTAAGGATGSVASGDAGDAGTPRTRRFARLASTVLRVGLGILWLAAGALKINDPDGMVRSVRAFRILPEALVDPVAY AVPFVEIALGVLLIVGLTVRLAAAISAVLFAVYIAAIASAAARGLRIDCGCFSAGGDLTSEAPTHYTQEIVRDSALLLAS LLLARWPAGYLSVDRLLNGPARQPSTTRTTFSGVPMASRTRKTSRTSAPPGRSSGGSTPGAPQDRGHA >Mature_227_residues TGTTAAGGATGSVASGDAGDAGTPRTRRFARLASTVLRVGLGILWLAAGALKINDPDGMVRSVRAFRILPEALVDPVAYA VPFVEIALGVLLIVGLTVRLAAAISAVLFAVYIAAIASAAARGLRIDCGCFSAGGDLTSEAPTHYTQEIVRDSALLLASL LLARWPAGYLSVDRLLNGPARQPSTTRTTFSGVPMASRTRKTSRTSAPPGRSSGGSTPGAPQDRGHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23325; Mature: 23194
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTTAAGGATGSVASGDAGDAGTPRTRRFARLASTVLRVGLGILWLAAGALKINDPDGM CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHH VRSVRAFRILPEALVDPVAYAVPFVEIALGVLLIVGLTVRLAAAISAVLFAVYIAAIASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARGLRIDCGCFSAGGDLTSEAPTHYTQEIVRDSALLLASLLLARWPAGYLSVDRLLNGP HHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC ARQPSTTRTTFSGVPMASRTRKTSRTSAPPGRSSGGSTPGAPQDRGHA CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGTTAAGGATGSVASGDAGDAGTPRTRRFARLASTVLRVGLGILWLAAGALKINDPDGM CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHH VRSVRAFRILPEALVDPVAYAVPFVEIALGVLLIVGLTVRLAAAISAVLFAVYIAAIASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARGLRIDCGCFSAGGDLTSEAPTHYTQEIVRDSALLLASLLLARWPAGYLSVDRLLNGP HHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC ARQPSTTRTTFSGVPMASRTRKTSRTSAPPGRSSGGSTPGAPQDRGHA CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA