| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317383
Identifier: 158317383
GI number: 158317383
Start: 6848856
End: 6849572
Strand: Direct
Name: 158317383
Synonym: Franean1_5634
Alternate gene names: NA
Gene position: 6848856-6849572 (Clockwise)
Preceding gene: 158317382
Following gene: 158317384
Centisome position: 76.25
GC content: 70.43
Gene sequence:
>717_bases GTGACGGCCGCGGAGCGGCGGGAGAAGGTCGCGGCGGCCCGGGCGGCGGCGGCCGCCCGGGAACGACGGCGCAGGCAGCT CATCATCGGCTCGGTCGTCGCCGCCGCGCTCGTCCTGATCGGGGTGATCGGCTTCGCCGTGCAGAACTCGCGGGAGGAGT CCAAGCCGGTCGTTCTCCCGGCGAGCGCGACAGGGCCCGACAACGCGATCGTCGTCGGGAAAGCTGACGCGCCTGTCACC CTCGACTTCTACGAGGACTTCCAGTGCCCCGCCTGCGGGTCCCTGGAGAGCACCACCGGCTCGACGATCAGCGACCTCAT CGACTCGGGTGACATTAAGATCAACTATCACGTCATGTCGTTCCTCGGCGACGAGTCGAAGCGGGCGGCGAACGCCGGTG CCGCCGCGGCCAACGAGGGCAAGTTCAAGGAGTTCCACGACGCCCTGTTCGCCGACCAGCCGGAGGAGCACACCGGCGGC TACCAGACCGACACACTCATCCAGAAGGGCGCCTCGGTCGGCCTGACCTCGGACGCCTTCGTCAGCGCGGTGCGGGACGG CAAGTACGACGGCTACGTCGCGAAGGTCGACGAGGACGCCTCCCGCAGCGGCGTCACCTCGACCCCGACCGTGCTCGTCG ACGGCAAGCAGCTCTCCGCCGACCAGCTGACCCCCGACGGCCTGCGCGCCGCCGTCTCCGCCGCGGCCAAGGGCTGA
Upstream 100 bases:
>100_bases CCATGGCATCGCGGACGAGGAAGACATCGCGGACGTCGGCGCCGCCCGGCCGTAGCTCCGGCGGCAGCACGCCCGGCGCC CCTCAGGATCGGGGCCACGC
Downstream 100 bases:
>100_bases CCGGGACGTCCGAACTCCTCGGCCGGCCAGCCAATCGGTTGGCCGGCCGGTGGTCTGCCGGGTGGTCCGCCGGCCGGGTG GTCCGCCGGCCGGGTGGTCC
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Integral Membrane Protein; Protein-Disulfide Isomerase-Like Protein; DSBA-Like Thioredoxin Domain-Containing Protein; Protein-Disulfide Isomerase; Secreted Protein; Dsba Oxidoreductase; Serine-Threonine Protein Kinase
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTAAERREKVAAARAAAAARERRRRQLIIGSVVAAALVLIGVIGFAVQNSREESKPVVLPASATGPDNAIVVGKADAPVT LDFYEDFQCPACGSLESTTGSTISDLIDSGDIKINYHVMSFLGDESKRAANAGAAAANEGKFKEFHDALFADQPEEHTGG YQTDTLIQKGASVGLTSDAFVSAVRDGKYDGYVAKVDEDASRSGVTSTPTVLVDGKQLSADQLTPDGLRAAVSAAAKG
Sequences:
>Translated_238_residues MTAAERREKVAAARAAAAARERRRRQLIIGSVVAAALVLIGVIGFAVQNSREESKPVVLPASATGPDNAIVVGKADAPVT LDFYEDFQCPACGSLESTTGSTISDLIDSGDIKINYHVMSFLGDESKRAANAGAAAANEGKFKEFHDALFADQPEEHTGG YQTDTLIQKGASVGLTSDAFVSAVRDGKYDGYVAKVDEDASRSGVTSTPTVLVDGKQLSADQLTPDGLRAAVSAAAKG >Mature_237_residues TAAERREKVAAARAAAAARERRRRQLIIGSVVAAALVLIGVIGFAVQNSREESKPVVLPASATGPDNAIVVGKADAPVTL DFYEDFQCPACGSLESTTGSTISDLIDSGDIKINYHVMSFLGDESKRAANAGAAAANEGKFKEFHDALFADQPEEHTGGY QTDTLIQKGASVGLTSDAFVSAVRDGKYDGYVAKVDEDASRSGVTSTPTVLVDGKQLSADQLTPDGLRAAVSAAAKG
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24720; Mature: 24588
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAERREKVAAARAAAAARERRRRQLIIGSVVAAALVLIGVIGFAVQNSREESKPVVLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE ASATGPDNAIVVGKADAPVTLDFYEDFQCPACGSLESTTGSTISDLIDSGDIKINYHVMS CCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEE FLGDESKRAANAGAAAANEGKFKEFHDALFADQPEEHTGGYQTDTLIQKGASVGLTSDAF HHCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCHHHHHHCCCCCCCCHHHH VSAVRDGKYDGYVAKVDEDASRSGVTSTPTVLVDGKQLSADQLTPDGLRAAVSAAAKG HHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TAAERREKVAAARAAAAARERRRRQLIIGSVVAAALVLIGVIGFAVQNSREESKPVVLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE ASATGPDNAIVVGKADAPVTLDFYEDFQCPACGSLESTTGSTISDLIDSGDIKINYHVMS CCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEE FLGDESKRAANAGAAAANEGKFKEFHDALFADQPEEHTGGYQTDTLIQKGASVGLTSDAF HHCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCHHHHHHCCCCCCCCHHHH VSAVRDGKYDGYVAKVDEDASRSGVTSTPTVLVDGKQLSADQLTPDGLRAAVSAAAKG HHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA