| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317380
Identifier: 158317380
GI number: 158317380
Start: 6845953
End: 6846951
Strand: Direct
Name: 158317380
Synonym: Franean1_5631
Alternate gene names: NA
Gene position: 6845953-6846951 (Clockwise)
Preceding gene: 158317377
Following gene: 158317381
Centisome position: 76.22
GC content: 79.28
Gene sequence:
>999_bases GTGAGCGGATGTCCAGCCGCCCGGGACGGACACCGGCAAGCACGCGCCACGCCCGGCGACCACCGGAGCAGCTCCGGAAG CGCGCCGGGCCCGATCCGGACGGGCCGGGAGCGGCACTACGCTGAAGGCGTGCACGTCGGCCGGTGCGGGGCGCGGTTCA CCGGCCTGGCCCACCGCCTCGCGTCCGCGGTGCTCCCAGGTCTGGCCTTCGCCGTGCCCACGGTCGCGCTCGCCCTGCTG GCCCACCTGCCGACCGCGCGCACCGAAGCACCCGCGCCCGCCGGCGTGGCGCTGTCTGTCGCCGCCATCGTCGCGCTGTG CGCCGGTAGTGATCTCGCCCGCTCAGCCCACTCGGCCGGGTCACGCGGCGGCCGGCCCGCTGCCGGGGCCACGGCCACAG CCACAGCCACAGCCGGACGGCGCCGGGTCGGTGGTCCCCGCTCGTTCCCCGCGCTGCTCGGCGTCCAGGCCGGGGTGCAT GTCCTGCTGCTCGCCGGGGCCGGGCGGCCCGGGCCACCCGGCGGCACCTCACTCAAAGGCCTGCTCTGCGCGCCCGGCAG CGGCCCCGGTGGGGCGCTCGCCTCCCCCGGGCAGCTCGCGGCGGCGCTCGCCGGCCGACCGCTCGGCGCCCCGCCGACCA CCGACAGCGGCGGCTTGGCCGCGGCCGCGGCGCGGCTGTCCCAGTACGGCGTCCACAGCCACGGGCTGTACGGCCAGGGC CTCCAGGGGCACGGCCTCCAGGGGCACGGCATCGCGGTGCTGCTCGCCCACACCCTGGCGGCTGCCGCTGCCTCCTGGTG GACCAGCCGCGGCTGCCGGGTGCTGCGCGCCGCCTGCCTGACGCTCGGGTCGTGCCTGTCCGCGCTGCGGGCTCCCGTCG CGCTGGTCCCGGTGCCGCGCCGGATCGTCCGCGCACCGCGCCTACACGCGCTCCGCGCACTCGACCGCCCGTGGGCGGCG ACGCCGTCCCGAGGCCCGCCGGCCATCGCGAGCTGCTGA
Upstream 100 bases:
>100_bases CTCCGGTGGCACTTGCGAACCTGGTCAGCACCCCGGTCGGGGCGCCCCTACCGCTCGGTGTGAGTTGTCCCCGCCGACCC CTTATCGGTTGACCCCCCTC
Downstream 100 bases:
>100_bases AACGGCGTAGCGACGCGACCGGCGCCAGGCGCCGCGATCCGTCCGCGCGCCCCTTCCCCACCCACCAGGCCCAACCCGAC GCCCGGCCGCTGACGCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSGCPAARDGHRQARATPGDHRSSSGSAPGPIRTGRERHYAEGVHVGRCGARFTGLAHRLASAVLPGLAFAVPTVALALL AHLPTARTEAPAPAGVALSVAAIVALCAGSDLARSAHSAGSRGGRPAAGATATATATAGRRRVGGPRSFPALLGVQAGVH VLLLAGAGRPGPPGGTSLKGLLCAPGSGPGGALASPGQLAAALAGRPLGAPPTTDSGGLAAAAARLSQYGVHSHGLYGQG LQGHGLQGHGIAVLLAHTLAAAAASWWTSRGCRVLRAACLTLGSCLSALRAPVALVPVPRRIVRAPRLHALRALDRPWAA TPSRGPPAIASC
Sequences:
>Translated_332_residues MSGCPAARDGHRQARATPGDHRSSSGSAPGPIRTGRERHYAEGVHVGRCGARFTGLAHRLASAVLPGLAFAVPTVALALL AHLPTARTEAPAPAGVALSVAAIVALCAGSDLARSAHSAGSRGGRPAAGATATATATAGRRRVGGPRSFPALLGVQAGVH VLLLAGAGRPGPPGGTSLKGLLCAPGSGPGGALASPGQLAAALAGRPLGAPPTTDSGGLAAAAARLSQYGVHSHGLYGQG LQGHGLQGHGIAVLLAHTLAAAAASWWTSRGCRVLRAACLTLGSCLSALRAPVALVPVPRRIVRAPRLHALRALDRPWAA TPSRGPPAIASC >Mature_331_residues SGCPAARDGHRQARATPGDHRSSSGSAPGPIRTGRERHYAEGVHVGRCGARFTGLAHRLASAVLPGLAFAVPTVALALLA HLPTARTEAPAPAGVALSVAAIVALCAGSDLARSAHSAGSRGGRPAAGATATATATAGRRRVGGPRSFPALLGVQAGVHV LLLAGAGRPGPPGGTSLKGLLCAPGSGPGGALASPGQLAAALAGRPLGAPPTTDSGGLAAAAARLSQYGVHSHGLYGQGL QGHGLQGHGIAVLLAHTLAAAAASWWTSRGCRVLRAACLTLGSCLSALRAPVALVPVPRRIVRAPRLHALRALDRPWAAT PSRGPPAIASC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32685; Mature: 32554
Theoretical pI: Translated: 12.28; Mature: 12.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGCPAARDGHRQARATPGDHRSSSGSAPGPIRTGRERHYAEGVHVGRCGARFTGLAHRL CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHH ASAVLPGLAFAVPTVALALLAHLPTARTEAPAPAGVALSVAAIVALCAGSDLARSAHSAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC SRGGRPAAGATATATATAGRRRVGGPRSFPALLGVQAGVHVLLLAGAGRPGPPGGTSLKG CCCCCCCCCCCHHHHHHCCHHHCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCE LLCAPGSGPGGALASPGQLAAALAGRPLGAPPTTDSGGLAAAAARLSQYGVHSHGLYGQG EEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC LQGHGLQGHGIAVLLAHTLAAAAASWWTSRGCRVLRAACLTLGSCLSALRAPVALVPVPR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCH RIVRAPRLHALRALDRPWAATPSRGPPAIASC HHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGCPAARDGHRQARATPGDHRSSSGSAPGPIRTGRERHYAEGVHVGRCGARFTGLAHRL CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHH ASAVLPGLAFAVPTVALALLAHLPTARTEAPAPAGVALSVAAIVALCAGSDLARSAHSAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC SRGGRPAAGATATATATAGRRRVGGPRSFPALLGVQAGVHVLLLAGAGRPGPPGGTSLKG CCCCCCCCCCCHHHHHHCCHHHCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCE LLCAPGSGPGGALASPGQLAAALAGRPLGAPPTTDSGGLAAAAARLSQYGVHSHGLYGQG EEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC LQGHGLQGHGIAVLLAHTLAAAAASWWTSRGCRVLRAACLTLGSCLSALRAPVALVPVPR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCH RIVRAPRLHALRALDRPWAATPSRGPPAIASC HHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA