| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317377
Identifier: 158317377
GI number: 158317377
Start: 6842990
End: 6844318
Strand: Direct
Name: 158317377
Synonym: Franean1_5628
Alternate gene names: NA
Gene position: 6842990-6844318 (Clockwise)
Preceding gene: 158317376
Following gene: 158317380
Centisome position: 76.19
GC content: 76.45
Gene sequence:
>1329_bases GTGCGCCGTAGCGTGAGCGGCGAGGGCTTCCGGACACTGGGGGTAGACATCGAGATCCCGGTCGCGCTGAACGCCGACAA CGCCGCGGCTGCACCGCTTGTTCCCGGGCCGACGCTGCCCCGTCACCGACGGGTCGGCGAGCGCGGGGCTCCCGCCCATG GCGAGCGTCCGACGTCCGGCCGCGGCGGGTCTCGACCCGCCAGGTCCACCGTCAAGGAGGCGCTGCTCCCGCCGGAGCGG ACCGCCCCCGCCGACGCGCGCGCCGGGCGCACTGGCGTCACGCCGGCCGACGTGCCCGCGGTGCTCGGCGGGGTGGACGC CACCGGCGCCGCCGCCGTCGCCCTGGAGCTCACCCGGGCCCCCCGCGGGTTCGGCCTGCGCCGAACGCGCCTGCGTGTCC TGGCCGCCGTCGTGGTCGTCGGCGTCGTCGGCGCACTCGTCGGCACCCGGTTCCGTTCGGACGTTCTCGGCACCCTCTCC GACGTCCCCGCGCCGCGCTGGCACTGGCTCGTGGTCTGCCTGCTCGCCTCGGTGCTCTTCTACGTGGCGCACGGCGTGAG CGTGCGGGCGGCGAGCGGGCTGCGGATGAGCCTGGGCACGGCCACCGCCTCCCAGCTCGCCGCGGCCGCGGCGAACCGAG TCGTCCCGGCGGGCCTGGGCGCCATCGCCGTGCACCTGCGCTTCCTGGAACGCCGCGGGATGACCCGTCCCGCCGCGGTG GCCGCCGTGGCGTCGATCAAGGGCGCCGCGTTCCTCGTCCACCTGGCCGGGATCGCGCTCGTCGCCGGCACCCTGCGCGG CTCCGGCGTCGGCGAAGCGGTGACGGCGCCCGTCCGGATGACGGTGAACGGGATCGGAGCCGGCCCCGTCGCGGCCGGGC TCGCCGTGGTCGGTGTGGGGATCGGCACCGCCGCCGCGCACCCGCGTGTACGCACGAGGCTGCGGCCCGCGCTGCGGGGC TTCCGCGCGCACCTGGCGGTGCTCGCCCGCTCGCCCGGCCGGACGGTCGTGCTCGTGACCAGCACCGCAGCCACGAAAGC CGCACAGGTCATGGGCCTCGCCTGCGCGGTGTGGTCGTTCGAGAGCGGGCTGAGCATCGCCTCGATCACCGCCGTGTACC TGGTCGGCTCGGCCGTCGCGGGCGCGGCGCCGACAGCCGGCAGCGTCGGGGCCATCGAACCGGCGCTCGTCATCGGGCTC ACCGCGTCGGGTGGCACGGCAGCGACCATGTTCGCCGCCGTCCTGGTCTTCCGCCTGATCAGCTACTGGCTGCCGATCCT GCCTGGGGTGACCGCGCTCGCGATGATGCGCCGCCGCGGCGACCTCTGA
Upstream 100 bases:
>100_bases TGTGGCCCGTGCGCTCCGCTGTCTCGTCCGTCCTGATTCCCCGGTCGGCGACCTTGCTCGGCCAGCCGCACAATGAAGCA CATTCAGGTGTCGTTCAGGC
Downstream 100 bases:
>100_bases GACCACCGCCACTGGGACCCCCGCCACTGGGACCACTGCACCTGAGACCACCGCCTCGAGGACCATCACTCCTCGACGGC CGCTGCCCGGTCTTCTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein-Like Protein
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MRRSVSGEGFRTLGVDIEIPVALNADNAAAAPLVPGPTLPRHRRVGERGAPAHGERPTSGRGGSRPARSTVKEALLPPER TAPADARAGRTGVTPADVPAVLGGVDATGAAAVALELTRAPRGFGLRRTRLRVLAAVVVVGVVGALVGTRFRSDVLGTLS DVPAPRWHWLVVCLLASVLFYVAHGVSVRAASGLRMSLGTATASQLAAAAANRVVPAGLGAIAVHLRFLERRGMTRPAAV AAVASIKGAAFLVHLAGIALVAGTLRGSGVGEAVTAPVRMTVNGIGAGPVAAGLAVVGVGIGTAAAHPRVRTRLRPALRG FRAHLAVLARSPGRTVVLVTSTAATKAAQVMGLACAVWSFESGLSIASITAVYLVGSAVAGAAPTAGSVGAIEPALVIGL TASGGTAATMFAAVLVFRLISYWLPILPGVTALAMMRRRGDL
Sequences:
>Translated_442_residues MRRSVSGEGFRTLGVDIEIPVALNADNAAAAPLVPGPTLPRHRRVGERGAPAHGERPTSGRGGSRPARSTVKEALLPPER TAPADARAGRTGVTPADVPAVLGGVDATGAAAVALELTRAPRGFGLRRTRLRVLAAVVVVGVVGALVGTRFRSDVLGTLS DVPAPRWHWLVVCLLASVLFYVAHGVSVRAASGLRMSLGTATASQLAAAAANRVVPAGLGAIAVHLRFLERRGMTRPAAV AAVASIKGAAFLVHLAGIALVAGTLRGSGVGEAVTAPVRMTVNGIGAGPVAAGLAVVGVGIGTAAAHPRVRTRLRPALRG FRAHLAVLARSPGRTVVLVTSTAATKAAQVMGLACAVWSFESGLSIASITAVYLVGSAVAGAAPTAGSVGAIEPALVIGL TASGGTAATMFAAVLVFRLISYWLPILPGVTALAMMRRRGDL >Mature_442_residues MRRSVSGEGFRTLGVDIEIPVALNADNAAAAPLVPGPTLPRHRRVGERGAPAHGERPTSGRGGSRPARSTVKEALLPPER TAPADARAGRTGVTPADVPAVLGGVDATGAAAVALELTRAPRGFGLRRTRLRVLAAVVVVGVVGALVGTRFRSDVLGTLS DVPAPRWHWLVVCLLASVLFYVAHGVSVRAASGLRMSLGTATASQLAAAAANRVVPAGLGAIAVHLRFLERRGMTRPAAV AAVASIKGAAFLVHLAGIALVAGTLRGSGVGEAVTAPVRMTVNGIGAGPVAAGLAVVGVGIGTAAAHPRVRTRLRPALRG FRAHLAVLARSPGRTVVLVTSTAATKAAQVMGLACAVWSFESGLSIASITAVYLVGSAVAGAAPTAGSVGAIEPALVIGL TASGGTAATMFAAVLVFRLISYWLPILPGVTALAMMRRRGDL
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44526; Mature: 44526
Theoretical pI: Translated: 12.38; Mature: 12.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSVSGEGFRTLGVDIEIPVALNADNAAAAPLVPGPTLPRHRRVGERGAPAHGERPTSG CCCCCCCCCCEEECCEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC RGGSRPARSTVKEALLPPERTAPADARAGRTGVTPADVPAVLGGVDATGAAAVALELTRA CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHEEEEECCC PRGFGLRRTRLRVLAAVVVVGVVGALVGTRFRSDVLGTLSDVPAPRWHWLVVCLLASVLF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH YVAHGVSVRAASGLRMSLGTATASQLAAAAANRVVPAGLGAIAVHLRFLERRGMTRPAAV HHHCCCCEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHH AAVASIKGAAFLVHLAGIALVAGTLRGSGVGEAVTAPVRMTVNGIGAGPVAAGLAVVGVG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCHHHHHHHHHHHC IGTAAAHPRVRTRLRPALRGFRAHLAVLARSPGRTVVLVTSTAATKAAQVMGLACAVWSF CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH ESGLSIASITAVYLVGSAVAGAAPTAGSVGAIEPALVIGLTASGGTAATMFAAVLVFRLI HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH SYWLPILPGVTALAMMRRRGDL HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRSVSGEGFRTLGVDIEIPVALNADNAAAAPLVPGPTLPRHRRVGERGAPAHGERPTSG CCCCCCCCCCEEECCEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC RGGSRPARSTVKEALLPPERTAPADARAGRTGVTPADVPAVLGGVDATGAAAVALELTRA CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHEEEEECCC PRGFGLRRTRLRVLAAVVVVGVVGALVGTRFRSDVLGTLSDVPAPRWHWLVVCLLASVLF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH YVAHGVSVRAASGLRMSLGTATASQLAAAAANRVVPAGLGAIAVHLRFLERRGMTRPAAV HHHCCCCEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHH AAVASIKGAAFLVHLAGIALVAGTLRGSGVGEAVTAPVRMTVNGIGAGPVAAGLAVVGVG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCHHHHHHHHHHHC IGTAAAHPRVRTRLRPALRGFRAHLAVLARSPGRTVVLVTSTAATKAAQVMGLACAVWSF CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH ESGLSIASITAVYLVGSAVAGAAPTAGSVGAIEPALVIGLTASGGTAATMFAAVLVFRLI HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH SYWLPILPGVTALAMMRRRGDL HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA