| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317371
Identifier: 158317371
GI number: 158317371
Start: 6836022
End: 6836696
Strand: Direct
Name: 158317371
Synonym: Franean1_5622
Alternate gene names: NA
Gene position: 6836022-6836696 (Clockwise)
Preceding gene: 158317366
Following gene: 158317372
Centisome position: 76.11
GC content: 69.78
Gene sequence:
>675_bases ATGGCGCTGAGAATCAGTGTGGACCTTGAGGGGCTGCGCTGGGCGGACCTCTTCCGGTTCGTCGATCTCGCTCGAAACGG CGGCATCGGGCCAGAGGACCAGGTCGACGTCATCACGTACGGCAGTGACCCGATGTCGGTCAGCCTCTCGGCGCGGATCT ACCCGGCCTCCGACGGATTCCTGTCGACCGAGCAGCCGGAGATCGGTTCGGGCGAGGGCATGCGCGGATCGACGCCGCTG TCGATCGGTTCCGGAAGCACCGGGACGGGAGCGGGCTTCGGTTACGACGGCACGCCCGAGCGCGCCGCTTCGTCCAATGG CAGCCACTATCCGGCGTTCGACAACGGATCGGAGCGCCCGCCGTCCGCGGCCGGCAACCTGCCGTCGTACGGGCCCGGCG GTTATGAGGGCCAGCAGGAACGGGGCACCCCGCCGCCTCCGCCGCCCCCGAGCGGCAGCCACTACCCGGCCTTCGACAGC CAGAACGAGCGGATGCCCGGTCAGAACGGCCAGTTCGCCGGCTTCGAGCCGGTCTTCGACCGCGCACAGGGCGGTAAGGA CACCGGTGGCGCCGCAGGCGTGGAAAGTCCCTATATCGAGGAGTTCGCACGGCTCCAGGAGGGGCTGATGCGGCAGGTCC GCCGCGACGGAGAGGTCCGGCCCGACCGCACCTGA
Upstream 100 bases:
>100_bases GCGCAGAGGCACCGGGGGGGAGCCCGGCCTCCAGGAGAAGCGTCCGCGTCGGAAGCCAGGTAACCGTCGACACGCACGAG CCGAGGGATGGGGCAAACCA
Downstream 100 bases:
>100_bases CGCCAGCCGGCCCGGCGCTGGCCCATCTGGGCCGGACCGATCCGACCGCGCGCGGGCGCTGTGTGACGCCGAGCTCCGAC GGAGCGCACCGCTATCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MALRISVDLEGLRWADLFRFVDLARNGGIGPEDQVDVITYGSDPMSVSLSARIYPASDGFLSTEQPEIGSGEGMRGSTPL SIGSGSTGTGAGFGYDGTPERAASSNGSHYPAFDNGSERPPSAAGNLPSYGPGGYEGQQERGTPPPPPPPSGSHYPAFDS QNERMPGQNGQFAGFEPVFDRAQGGKDTGGAAGVESPYIEEFARLQEGLMRQVRRDGEVRPDRT
Sequences:
>Translated_224_residues MALRISVDLEGLRWADLFRFVDLARNGGIGPEDQVDVITYGSDPMSVSLSARIYPASDGFLSTEQPEIGSGEGMRGSTPL SIGSGSTGTGAGFGYDGTPERAASSNGSHYPAFDNGSERPPSAAGNLPSYGPGGYEGQQERGTPPPPPPPSGSHYPAFDS QNERMPGQNGQFAGFEPVFDRAQGGKDTGGAAGVESPYIEEFARLQEGLMRQVRRDGEVRPDRT >Mature_223_residues ALRISVDLEGLRWADLFRFVDLARNGGIGPEDQVDVITYGSDPMSVSLSARIYPASDGFLSTEQPEIGSGEGMRGSTPLS IGSGSTGTGAGFGYDGTPERAASSNGSHYPAFDNGSERPPSAAGNLPSYGPGGYEGQQERGTPPPPPPPSGSHYPAFDSQ NERMPGQNGQFAGFEPVFDRAQGGKDTGGAAGVESPYIEEFARLQEGLMRQVRRDGEVRPDRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23589; Mature: 23458
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRISVDLEGLRWADLFRFVDLARNGGIGPEDQVDVITYGSDPMSVSLSARIYPASDGF CEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCC LSTEQPEIGSGEGMRGSTPLSIGSGSTGTGAGFGYDGTPERAASSNGSHYPAFDNGSERP CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC PSAAGNLPSYGPGGYEGQQERGTPPPPPPPSGSHYPAFDSQNERMPGQNGQFAGFEPVFD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RAQGGKDTGGAAGVESPYIEEFARLQEGLMRQVRRDGEVRPDRT HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ALRISVDLEGLRWADLFRFVDLARNGGIGPEDQVDVITYGSDPMSVSLSARIYPASDGF EEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCC LSTEQPEIGSGEGMRGSTPLSIGSGSTGTGAGFGYDGTPERAASSNGSHYPAFDNGSERP CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC PSAAGNLPSYGPGGYEGQQERGTPPPPPPPSGSHYPAFDSQNERMPGQNGQFAGFEPVFD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RAQGGKDTGGAAGVESPYIEEFARLQEGLMRQVRRDGEVRPDRT HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA