| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317372
Identifier: 158317372
GI number: 158317372
Start: 6836922
End: 6839258
Strand: Direct
Name: 158317372
Synonym: Franean1_5623
Alternate gene names: NA
Gene position: 6836922-6839258 (Clockwise)
Preceding gene: 158317371
Following gene: 158317373
Centisome position: 76.12
GC content: 77.96
Gene sequence:
>2337_bases ATGCTGCCTTCGATGGAGGATCCGCGCGTAGTCGACGTCGAGCGGTACCACGGTCAGTTGCGCTCGGAACTCGAGATGAT CGCGAACGGACCAGTACTGGCCGGCCCACGGATCGTCGAGCACATCAATTCCCTGATCACACTGATTGACCTGCACCAAC CGAACGAGTTCGACCTCTGCCTCAGCTGTGACCGGCTCTGGCCCTGCGCGACCGTCGTCGCCATCACCGGTGAGCTAGCG GCCACCGAGGACGAGGTGACGCCCCGGCCGCTGCCCGAAGCCCCGGCCACGCGGTCCGGCGACGGCCGCCAGGCGGACAG GCGCCCGGCCGACCCCCGCCACGCGGCGGCGGGAGGCCCCGCCGACCAGCGCCGGCCGGACGTTCGCGCGGCCGCGCCAC CACCATTCGACACGGGCTCCTACTCGACGACGACGCAGACCAGCACCGGCCAGTCGACGATGCCGCACGAACTGCCACGG GGCACGGACCCGGTCCGGCAGCGCGGCGCCCCCGGCCCGGCGGACGAGCCGATGGCCGCGCCCCGGCCGACCGGGCCGCA CCGCGTGCCGCCGCCGCCCTCCATGCCACCACCCTCCATGCCACCGCCGTCGCATCCGTCCGGCATGCCGCCGGGCACGC GCCCGCCGGCCGCCGTTCCGCCGGCCGCGGCCGCGGCCACCGGCGGGATGCCCACCGGCGGCTCGCGGACGGGTGGGATG CCCCTGGGTGGCGCGGGCAACAGCGCGTCCGCCCGCACCCCCGTATTCGGCGACCCGTTGGCCGGGATCCGCCGTCCGGG CGCCGGCATGCCGCCGCGGGTCGGCGGGGGCCCGCCCGGCGAGCAGGCCCCACCCGGCCGGCCGGGGCCGCCCCCCGCCG ACACCGGTCACCGCTCCGCACCGCCCGGCCTCCAACCGCCCGGCCTCCAACCACCTGGCCTCCAGCCGCCGGGGCTCCAA CCACCCGGCTTCCAGCCGCCCGGACTTCAACCACCTGGGCTCCAAGCAGCCGGGCCGCCGCCGGGCACCGCCGGGCAGCC GGGACGTCCGATGTCGGCCCCCGGCTTCGAGCGAGCCCGCGAACAGCAGCTTCCCGGTGGCCCGGGCAGCCGGCCCGCGC CCGGGTTCAACCGCCCGGGCGGGCCGCCCGCGCACCGCCCCGCGGCCGGCCCGGCCGGCGGCCCGCCGACCGGGCCGATG GAGCGCCCCGGCTACAACGGCCAGCCCGGCTACAACGGGCAACCGGCGTACAACGGGCAACCGGCGTACAACGGGCCGCC CAGCCACAACGGGCAACCCGGCCACAGCAACGGGCAGCCTGGCTACGCCGGGCAGCCCGGCCAGGGCCGGCAGCCAGGCC ATCCCGGTTATCAGGGCCAGGTGGAGCAGTCCGGCCCGATCGCGCGGCCCGGCCTGTTCGGCCAGCCCGCGGCAACGGGC CCGGGACGGTCCACGGGCCCGGTCTCCACCGGGCTCGGTGACCGCATGCCCGGACGGGCCCAGCATCCGGGCGATCCGTC CCGCCCCCTGCCCCACCCCGCGCAGTCCCAACCGGCGCAGCACCAACACGCGGCCGGCGTGTCCCGGTCCGAGCCGTCCC GGGCTCCGGCCCGTCCTGACGGTGTCGAGGCCCCGGCGGCTCAGGCCGACGGTTTCTCGGTGCCGACGTCCCGGCAGGCG CCGCCGATCTCCGGCCCGGTGGAGATGCTGCCCGCCAGCATCGCCGCCGCCCGGGCCGCGGAGCTGGCGCGCGGGCAGGC GGCCGCCGCGGCCGGACCACCGCCGCCGCGGCATCCCGACATCGTCCGCGGCCCCGAACGTGGAACCCGGCCGCCCGTCG GACGGCTCACCTCCGACCCGGCGCGCACGCGCGGCCGGCACGCGGGCCCGGACCAGCCGCGTCCCCAGGGCTCCCCGTGG AGCAGCCAGGCCGCCGAGCAGCGCCGTCCCATCTCCGTCGACGACTCCTGGGCCGGTGTCGGGCGCAGCCCGCGTGGCCA GAACGGCGACGGCGGCCAGGGCGGTCAAGGCGGCCAGCCCGGGCACGGTGGCCCGAACGGCCAGAACGGGCACGGCGGTC AGAACGGGTATGGCGGCCAGAACGGCCAGCATCAGCCGAACGGCCAGCGGGGGCCCGGCGGCCCGGGACGTCCCGACACC GACGTCGGCGCGGTCGGCGCGAACCGTTCCAGCGGCCCGGCCGGCCCGGGCCCGGCGGACCGTGGCCCCGGCCGCGACCA GGCCTCGGACCCGTCGCTGAGCCCTGAGGTGGAGGCCGTCACGAGGGCCTGGCTCGCGCGCAAGGATTCGGTGCTCGACG GCATCGACGTCATCTGA
Upstream 100 bases:
>100_bases ACTCGCTATCCGTGGAAACGGCGGACGCACATAGTGAGGACAAGGTCACCAGTTACCCGCAGTGGTGGTGCCCCCCGCAC GTTTCCGCCCGCAATGGTGC
Downstream 100 bases:
>100_bases CCGCCGACCGCCACCAGTGCGGTCATCGGGGGTTGCGGCGAGTCGCGACCACCCCGCACCGGACCCGGGCCAGGCTGTGT CTCGCGCCTCCGGTCTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 778; Mature: 778
Protein sequence:
>778_residues MLPSMEDPRVVDVERYHGQLRSELEMIANGPVLAGPRIVEHINSLITLIDLHQPNEFDLCLSCDRLWPCATVVAITGELA ATEDEVTPRPLPEAPATRSGDGRQADRRPADPRHAAAGGPADQRRPDVRAAAPPPFDTGSYSTTTQTSTGQSTMPHELPR GTDPVRQRGAPGPADEPMAAPRPTGPHRVPPPPSMPPPSMPPPSHPSGMPPGTRPPAAVPPAAAAATGGMPTGGSRTGGM PLGGAGNSASARTPVFGDPLAGIRRPGAGMPPRVGGGPPGEQAPPGRPGPPPADTGHRSAPPGLQPPGLQPPGLQPPGLQ PPGFQPPGLQPPGLQAAGPPPGTAGQPGRPMSAPGFERAREQQLPGGPGSRPAPGFNRPGGPPAHRPAAGPAGGPPTGPM ERPGYNGQPGYNGQPAYNGQPAYNGPPSHNGQPGHSNGQPGYAGQPGQGRQPGHPGYQGQVEQSGPIARPGLFGQPAATG PGRSTGPVSTGLGDRMPGRAQHPGDPSRPLPHPAQSQPAQHQHAAGVSRSEPSRAPARPDGVEAPAAQADGFSVPTSRQA PPISGPVEMLPASIAAARAAELARGQAAAAAGPPPPRHPDIVRGPERGTRPPVGRLTSDPARTRGRHAGPDQPRPQGSPW SSQAAEQRRPISVDDSWAGVGRSPRGQNGDGGQGGQGGQPGHGGPNGQNGHGGQNGYGGQNGQHQPNGQRGPGGPGRPDT DVGAVGANRSSGPAGPGPADRGPGRDQASDPSLSPEVEAVTRAWLARKDSVLDGIDVI
Sequences:
>Translated_778_residues MLPSMEDPRVVDVERYHGQLRSELEMIANGPVLAGPRIVEHINSLITLIDLHQPNEFDLCLSCDRLWPCATVVAITGELA ATEDEVTPRPLPEAPATRSGDGRQADRRPADPRHAAAGGPADQRRPDVRAAAPPPFDTGSYSTTTQTSTGQSTMPHELPR GTDPVRQRGAPGPADEPMAAPRPTGPHRVPPPPSMPPPSMPPPSHPSGMPPGTRPPAAVPPAAAAATGGMPTGGSRTGGM PLGGAGNSASARTPVFGDPLAGIRRPGAGMPPRVGGGPPGEQAPPGRPGPPPADTGHRSAPPGLQPPGLQPPGLQPPGLQ PPGFQPPGLQPPGLQAAGPPPGTAGQPGRPMSAPGFERAREQQLPGGPGSRPAPGFNRPGGPPAHRPAAGPAGGPPTGPM ERPGYNGQPGYNGQPAYNGQPAYNGPPSHNGQPGHSNGQPGYAGQPGQGRQPGHPGYQGQVEQSGPIARPGLFGQPAATG PGRSTGPVSTGLGDRMPGRAQHPGDPSRPLPHPAQSQPAQHQHAAGVSRSEPSRAPARPDGVEAPAAQADGFSVPTSRQA PPISGPVEMLPASIAAARAAELARGQAAAAAGPPPPRHPDIVRGPERGTRPPVGRLTSDPARTRGRHAGPDQPRPQGSPW SSQAAEQRRPISVDDSWAGVGRSPRGQNGDGGQGGQGGQPGHGGPNGQNGHGGQNGYGGQNGQHQPNGQRGPGGPGRPDT DVGAVGANRSSGPAGPGPADRGPGRDQASDPSLSPEVEAVTRAWLARKDSVLDGIDVI >Mature_778_residues MLPSMEDPRVVDVERYHGQLRSELEMIANGPVLAGPRIVEHINSLITLIDLHQPNEFDLCLSCDRLWPCATVVAITGELA ATEDEVTPRPLPEAPATRSGDGRQADRRPADPRHAAAGGPADQRRPDVRAAAPPPFDTGSYSTTTQTSTGQSTMPHELPR GTDPVRQRGAPGPADEPMAAPRPTGPHRVPPPPSMPPPSMPPPSHPSGMPPGTRPPAAVPPAAAAATGGMPTGGSRTGGM PLGGAGNSASARTPVFGDPLAGIRRPGAGMPPRVGGGPPGEQAPPGRPGPPPADTGHRSAPPGLQPPGLQPPGLQPPGLQ PPGFQPPGLQPPGLQAAGPPPGTAGQPGRPMSAPGFERAREQQLPGGPGSRPAPGFNRPGGPPAHRPAAGPAGGPPTGPM ERPGYNGQPGYNGQPAYNGQPAYNGPPSHNGQPGHSNGQPGYAGQPGQGRQPGHPGYQGQVEQSGPIARPGLFGQPAATG PGRSTGPVSTGLGDRMPGRAQHPGDPSRPLPHPAQSQPAQHQHAAGVSRSEPSRAPARPDGVEAPAAQADGFSVPTSRQA PPISGPVEMLPASIAAARAAELARGQAAAAAGPPPPRHPDIVRGPERGTRPPVGRLTSDPARTRGRHAGPDQPRPQGSPW SSQAAEQRRPISVDDSWAGVGRSPRGQNGDGGQGGQGGQPGHGGPNGQNGHGGQNGYGGQNGQHQPNGQRGPGGPGRPDT DVGAVGANRSSGPAGPGPADRGPGRDQASDPSLSPEVEAVTRAWLARKDSVLDGIDVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78509; Mature: 78509
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPSMEDPRVVDVERYHGQLRSELEMIANGPVLAGPRIVEHINSLITLIDLHQPNEFDLC CCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE LSCDRLWPCATVVAITGELAATEDEVTPRPLPEAPATRSGDGRQADRRPADPRHAAAGGP EECCCCCHHHEEEHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADQRRPDVRAAAPPPFDTGSYSTTTQTSTGQSTMPHELPRGTDPVRQRGAPGPADEPMAA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCC PRPTGPHRVPPPPSMPPPSMPPPSHPSGMPPGTRPPAAVPPAAAAATGGMPTGGSRTGGM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC PLGGAGNSASARTPVFGDPLAGIRRPGAGMPPRVGGGPPGEQAPPGRPGPPPADTGHRSA CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPGLQPPGLQPPGLQPPGLQPPGFQPPGLQPPGLQAAGPPPGTAGQPGRPMSAPGFERAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH EQQLPGGPGSRPAPGFNRPGGPPAHRPAAGPAGGPPTGPMERPGYNGQPGYNGQPAYNGQ HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAYNGPPSHNGQPGHSNGQPGYAGQPGQGRQPGHPGYQGQVEQSGPIARPGLFGQPAATG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGRSTGPVSTGLGDRMPGRAQHPGDPSRPLPHPAQSQPAQHQHAAGVSRSEPSRAPARPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC GVEAPAAQADGFSVPTSRQAPPISGPVEMLPASIAAARAAELARGQAAAAAGPPPPRHPD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC IVRGPERGTRPPVGRLTSDPARTRGRHAGPDQPRPQGSPWSSQAAEQRRPISVDDSWAGV CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHCC GRSPRGQNGDGGQGGQGGQPGHGGPNGQNGHGGQNGYGGQNGQHQPNGQRGPGGPGRPDT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVGAVGANRSSGPAGPGPADRGPGRDQASDPSLSPEVEAVTRAWLARKDSVLDGIDVI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLPSMEDPRVVDVERYHGQLRSELEMIANGPVLAGPRIVEHINSLITLIDLHQPNEFDLC CCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE LSCDRLWPCATVVAITGELAATEDEVTPRPLPEAPATRSGDGRQADRRPADPRHAAAGGP EECCCCCHHHEEEHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADQRRPDVRAAAPPPFDTGSYSTTTQTSTGQSTMPHELPRGTDPVRQRGAPGPADEPMAA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCC PRPTGPHRVPPPPSMPPPSMPPPSHPSGMPPGTRPPAAVPPAAAAATGGMPTGGSRTGGM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC PLGGAGNSASARTPVFGDPLAGIRRPGAGMPPRVGGGPPGEQAPPGRPGPPPADTGHRSA CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPGLQPPGLQPPGLQPPGLQPPGFQPPGLQPPGLQAAGPPPGTAGQPGRPMSAPGFERAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH EQQLPGGPGSRPAPGFNRPGGPPAHRPAAGPAGGPPTGPMERPGYNGQPGYNGQPAYNGQ HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAYNGPPSHNGQPGHSNGQPGYAGQPGQGRQPGHPGYQGQVEQSGPIARPGLFGQPAATG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGRSTGPVSTGLGDRMPGRAQHPGDPSRPLPHPAQSQPAQHQHAAGVSRSEPSRAPARPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC GVEAPAAQADGFSVPTSRQAPPISGPVEMLPASIAAARAAELARGQAAAAAGPPPPRHPD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC IVRGPERGTRPPVGRLTSDPARTRGRHAGPDQPRPQGSPWSSQAAEQRRPISVDDSWAGV CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHCC GRSPRGQNGDGGQGGQGGQPGHGGPNGQNGHGGQNGYGGQNGQHQPNGQRGPGGPGRPDT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVGAVGANRSSGPAGPGPADRGPGRDQASDPSLSPEVEAVTRAWLARKDSVLDGIDVI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA