| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mhpC [C]
Identifier: 158317361
GI number: 158317361
Start: 6810218
End: 6811153
Strand: Reverse
Name: mhpC [C]
Synonym: Franean1_5612
Alternate gene names: 158317361
Gene position: 6811153-6810218 (Counterclockwise)
Preceding gene: 158317362
Following gene: 158317360
Centisome position: 75.83
GC content: 70.73
Gene sequence:
>936_bases GTGGCTGAGATCGTCGCGAACGGCGTCCGTCTGCATGTGCAGAGGCTGGGGCCCAAGGGTGGGGCCGGTCCCGAGTCGCC GGTCGTGGTGATGGTGCACGGAATGGTGATGGACAACATCTCCAGCTTCTACTTCGCGCTGGGCAACTGCCTGGCCGGAG CGGGATGTGACGTCATCTGCTACGACCTGCGCGGCCATGGCCGCAGTGAGCGGACATCGACCGGCTACACGATGTCCGAC TCGATGGCCGACATCGAGAGCCTGCTCGACGCGCTCGACGTGCGCCGGCCCGTGCACGTCGTGGGCAACAGCTACGGCGC GACGCTGACCCTCGCGCTCGGCCTGGCCCACCCGGAGCGGGTGGCGAGCCTGACCCTCATCGAGCCGCCGTTCCTCATCG AGGGCCTCGGCGAGGAGATGGCGCGCTCACTGACCCAGGTGCTCGCGGCCGTCACCGACGAGGAGGTGGAGGAGTGGCTG GAGAACTCCGCCGGCCGCGCGGTCTCCCGGATCACGCGCGCCTCGCAGGCGCTGCTGAAGGAGACCACGATCGCCGAGGA CATGCTGGCGACCCCGCCGTTCTCGCCGGAGGCGCTGGCCAGCCTGCCGATGCCGGTGCTCGCCGTCTACGGGGCGAACT CGGACATCATCGACCAGGCCGAGGGGCTCGCCGAGCTCGTCCCGGACTGCACCCTGGTCGTCCTGGAGCAGCACACCCAC ATGGTGCTGCGCGAGGCGGCCGACTACCTGCGCGACCTGCTGCGGTGGTGGCTGTTCCGGCGGTCCGAGCCGATGCCCTC GCACCAGGTGCGCGGCGCCGGGTTCGACACTCCCGACTGGGTGCGGCAGATGATCCCGCCGCCGAACCTCAACAGTGGGG ACGAGCCCACGACGTCGCTGTCCGCGGCGCGGGCCGGTTCGCCGGCCGAGGCCTGA
Upstream 100 bases:
>100_bases GGCGGTCACGGTCGGCGGGGGGCTACGGGGACCTCGTATGCGCGCGGCGCGGGGCGCGCCGCGCGCACAACCTTCGTGAA CGAAGCTAGGGAGAGAGCGC
Downstream 100 bases:
>100_bases TCGTCACCGGTGCGGCTCGCGAAGGGTGCGGCTGACTCACCGCCGGAAGGGAGACGAATGGAATTTCGGGGGCTTTGATG GGCCGTGTTCTCTTCGCCGT
Product: alpha/beta hydrolase fold protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase; Hydrolase Or Acyltransferase-Like Protein
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAEIVANGVRLHVQRLGPKGGAGPESPVVVMVHGMVMDNISSFYFALGNCLAGAGCDVICYDLRGHGRSERTSTGYTMSD SMADIESLLDALDVRRPVHVVGNSYGATLTLALGLAHPERVASLTLIEPPFLIEGLGEEMARSLTQVLAAVTDEEVEEWL ENSAGRAVSRITRASQALLKETTIAEDMLATPPFSPEALASLPMPVLAVYGANSDIIDQAEGLAELVPDCTLVVLEQHTH MVLREAADYLRDLLRWWLFRRSEPMPSHQVRGAGFDTPDWVRQMIPPPNLNSGDEPTTSLSAARAGSPAEA
Sequences:
>Translated_311_residues MAEIVANGVRLHVQRLGPKGGAGPESPVVVMVHGMVMDNISSFYFALGNCLAGAGCDVICYDLRGHGRSERTSTGYTMSD SMADIESLLDALDVRRPVHVVGNSYGATLTLALGLAHPERVASLTLIEPPFLIEGLGEEMARSLTQVLAAVTDEEVEEWL ENSAGRAVSRITRASQALLKETTIAEDMLATPPFSPEALASLPMPVLAVYGANSDIIDQAEGLAELVPDCTLVVLEQHTH MVLREAADYLRDLLRWWLFRRSEPMPSHQVRGAGFDTPDWVRQMIPPPNLNSGDEPTTSLSAARAGSPAEA >Mature_310_residues AEIVANGVRLHVQRLGPKGGAGPESPVVVMVHGMVMDNISSFYFALGNCLAGAGCDVICYDLRGHGRSERTSTGYTMSDS MADIESLLDALDVRRPVHVVGNSYGATLTLALGLAHPERVASLTLIEPPFLIEGLGEEMARSLTQVLAAVTDEEVEEWLE NSAGRAVSRITRASQALLKETTIAEDMLATPPFSPEALASLPMPVLAVYGANSDIIDQAEGLAELVPDCTLVVLEQHTHM VLREAADYLRDLLRWWLFRRSEPMPSHQVRGAGFDTPDWVRQMIPPPNLNSGDEPTTSLSAARAGSPAEA
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.- [C]
Molecular weight: Translated: 33468; Mature: 33337
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIVANGVRLHVQRLGPKGGAGPESPVVVMVHGMVMDNISSFYFALGNCLAGAGCDVIC CCCHHHCHHHEEHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEE YDLRGHGRSERTSTGYTMSDSMADIESLLDALDVRRPVHVVGNSYGATLTLALGLAHPER EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEECCCCHHH VASLTLIEPPFLIEGLGEEMARSLTQVLAAVTDEEVEEWLENSAGRAVSRITRASQALLK HHEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH ETTIAEDMLATPPFSPEALASLPMPVLAVYGANSDIIDQAEGLAELVPDCTLVVLEQHTH HHHHHHHHHCCCCCCHHHHHHCCCHHEEEECCCCCHHHHHHHHHHHCCCCEEEEHHHHHH MVLREAADYLRDLLRWWLFRRSEPMPSHQVRGAGFDTPDWVRQMIPPPNLNSGDEPTTSL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHH SAARAGSPAEA HHHCCCCCCCC >Mature Secondary Structure AEIVANGVRLHVQRLGPKGGAGPESPVVVMVHGMVMDNISSFYFALGNCLAGAGCDVIC CCHHHCHHHEEHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEE YDLRGHGRSERTSTGYTMSDSMADIESLLDALDVRRPVHVVGNSYGATLTLALGLAHPER EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEECCCCHHH VASLTLIEPPFLIEGLGEEMARSLTQVLAAVTDEEVEEWLENSAGRAVSRITRASQALLK HHEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH ETTIAEDMLATPPFSPEALASLPMPVLAVYGANSDIIDQAEGLAELVPDCTLVVLEQHTH HHHHHHHHHCCCCCCHHHHHHCCCHHEEEECCCCCHHHHHHHHHHHCCCCEEEEHHHHHH MVLREAADYLRDLLRWWLFRRSEPMPSHQVRGAGFDTPDWVRQMIPPPNLNSGDEPTTSL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHH SAARAGSPAEA HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA