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The map label for this gene is glpD1 [H]

Identifier: 158317351

GI number: 158317351

Start: 6793439

End: 6795055

Strand: Direct

Name: glpD1 [H]

Synonym: Franean1_5601

Alternate gene names: 158317351

Gene position: 6793439-6795055 (Clockwise)

Preceding gene: 158317350

Following gene: 158317354

Centisome position: 75.63

GC content: 77.49

Gene sequence:

>1617_bases
ATGAGCACACCGTTCGACCGCTCGTCGCTCACCGCCGACCGCCGTGCCCGCGAGCTCGGCGAGCTCGCGGGCGGCGAGGC
CGTCGATCTCCTCGTCGTCGGCGGCGGCGTAACCGGCGCCGGGGTGGCGCTCGACGCGGCCTCGCGCGGGCTGTCCGTCG
CGCTGGTCGAGGCGCACGACCTGGCCTTCGGCACCAGCCGGTGGAGCTCGAAGCTCGTCCACGGCGGGTTGCGCTACCTC
GCCTCCGGTGACATCGGGCTGGCCCGGGAGAGCGCGCTCGAACGCGAGATCCTGATGCGCCGCACCGCTCCGCATCTGGT
GCACCCGCTGCCGATCGTGCTGCCGCTCACCGAGGACGTCCCCGCCGGCTCGGCGATGCTGGCCCGGGCCGGGATGGGCC
TGGCGGACCTGCTGCGGCGGGGCGCCCGGACCCCCGGCACGGTGCTGCCGCCGCCGCGGCGGCTCTCGGCGGTCGAGACG
CTCGGGATGGTCCCCGGGCTGCGCGAGGCCGGGCTGCGCGGCGGCCTGCTCCACTGGGACGGCCAGCTCGTCGACGACGC
CCGCCTGGTCGTGACGATCGCCCGGACGGCGGCGGCGTTCGGCGCCCGGGTGCTGACCCGGGTCCGCGTGCTGTCGGTGG
AGAGCCCGGGGTACGCCCCTGGCGGCGCGGCACGGCGCGGCGGCCTGCCGCCGGAACCGGTCGGCGTCGAGGTGGTCGAC
ACCCTGACGGGCACCCGGTGCACGCTGCGGGCCCGCACCGTGGTGAACGCGACCGGGGTCTGGACGCCCGCACTCGCCCC
GGAGGTCAGGCTCCGCCCCAGCCGCGGCACCCACCTGGTGCTGCCCGCGGCGGCGTTCGGCGGCACGCCGACGGCGCTGT
CGGTGCCGATTCCCGGCGAGCGGAACCGGTACGCCCTCGTGCTGCCGCAGGGCGACGGGCGGGTGTATGTGGGACTGACC
GACATCCCGACGGACGAGGTCGCGGACGTGCCGACGCCGGATCACCAGGAGATCACGCAGCTGCTGAACGTCGTGTCGAG
CGTGCTGGCCACCCCGGTCGACCGCGCGGACCTGCTGGGGGCGTTCGCCGGGCTGCGCCCGCTGCTGGACGGCCCGAACG
GGCGCACGGCGGACCTGTCCCGGCGGCACGCCGTGCACGTCGGGTCCGACGGCGTGATCACCGTGGTGGGCGGCAAGCTG
ACGACCTACCGCCGAATGGCGGCGGACGCGGTGGACGCCGCCGTCGCCCAGGCCGACCTGGACGCGGGGCCCTGTCGGAC
CGACCGGCTCCCCCTCGTCGGGGCGGCCTCGCGCCGCGTGCTCGCCGCGGTGCCGGCGCCGCGCCGGCTGGTGGCGCGCT
ACGGAACCCAGGCCCCGGCGGTGCTGGCCCTGGCCGAACGCGACCCGGAGCTGCTCGCGCCGATCGCCGACGGAGTCGCG
GTCACCCGCGCCGAGCTGGTGTTCGCCGTGCGCCACGAGGGAGCACTCGACGCCGACGACCTGCTCGACCGGCGGACCCG
CGTCGGGCTCGTCCCGGCCGACCGCGCGGCGGCGCTCGACGCGGCACGCGAGGTGCTGGCGGCCTGCGCCGTCCCCGCCG
GCTCACCGGTCGACTGA

Upstream 100 bases:

>100_bases
ACGCAACTGACGCTGTCAGGGCCGTTGACGTCGTTGAGGCCGTCGAGGCTGCTGACGCAGTTGACGAGATCCGGCCGATC
GAGCACCCGGGAGCGCCGTC

Downstream 100 bases:

>100_bases
GCCACCGGCCGGCCAGGCCCGGCCGACCAGGCCCGACCGACCCGAGCCGGCGATCGAGCGAGCCTGCGAAGCGCCGAGCT
GTCAGGTCAGGGAGTCGACG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MSTPFDRSSLTADRRARELGELAGGEAVDLLVVGGGVTGAGVALDAASRGLSVALVEAHDLAFGTSRWSSKLVHGGLRYL
ASGDIGLARESALEREILMRRTAPHLVHPLPIVLPLTEDVPAGSAMLARAGMGLADLLRRGARTPGTVLPPPRRLSAVET
LGMVPGLREAGLRGGLLHWDGQLVDDARLVVTIARTAAAFGARVLTRVRVLSVESPGYAPGGAARRGGLPPEPVGVEVVD
TLTGTRCTLRARTVVNATGVWTPALAPEVRLRPSRGTHLVLPAAAFGGTPTALSVPIPGERNRYALVLPQGDGRVYVGLT
DIPTDEVADVPTPDHQEITQLLNVVSSVLATPVDRADLLGAFAGLRPLLDGPNGRTADLSRRHAVHVGSDGVITVVGGKL
TTYRRMAADAVDAAVAQADLDAGPCRTDRLPLVGAASRRVLAAVPAPRRLVARYGTQAPAVLALAERDPELLAPIADGVA
VTRAELVFAVRHEGALDADDLLDRRTRVGLVPADRAAALDAAREVLAACAVPAGSPVD

Sequences:

>Translated_538_residues
MSTPFDRSSLTADRRARELGELAGGEAVDLLVVGGGVTGAGVALDAASRGLSVALVEAHDLAFGTSRWSSKLVHGGLRYL
ASGDIGLARESALEREILMRRTAPHLVHPLPIVLPLTEDVPAGSAMLARAGMGLADLLRRGARTPGTVLPPPRRLSAVET
LGMVPGLREAGLRGGLLHWDGQLVDDARLVVTIARTAAAFGARVLTRVRVLSVESPGYAPGGAARRGGLPPEPVGVEVVD
TLTGTRCTLRARTVVNATGVWTPALAPEVRLRPSRGTHLVLPAAAFGGTPTALSVPIPGERNRYALVLPQGDGRVYVGLT
DIPTDEVADVPTPDHQEITQLLNVVSSVLATPVDRADLLGAFAGLRPLLDGPNGRTADLSRRHAVHVGSDGVITVVGGKL
TTYRRMAADAVDAAVAQADLDAGPCRTDRLPLVGAASRRVLAAVPAPRRLVARYGTQAPAVLALAERDPELLAPIADGVA
VTRAELVFAVRHEGALDADDLLDRRTRVGLVPADRAAALDAAREVLAACAVPAGSPVD
>Mature_537_residues
STPFDRSSLTADRRARELGELAGGEAVDLLVVGGGVTGAGVALDAASRGLSVALVEAHDLAFGTSRWSSKLVHGGLRYLA
SGDIGLARESALEREILMRRTAPHLVHPLPIVLPLTEDVPAGSAMLARAGMGLADLLRRGARTPGTVLPPPRRLSAVETL
GMVPGLREAGLRGGLLHWDGQLVDDARLVVTIARTAAAFGARVLTRVRVLSVESPGYAPGGAARRGGLPPEPVGVEVVDT
LTGTRCTLRARTVVNATGVWTPALAPEVRLRPSRGTHLVLPAAAFGGTPTALSVPIPGERNRYALVLPQGDGRVYVGLTD
IPTDEVADVPTPDHQEITQLLNVVSSVLATPVDRADLLGAFAGLRPLLDGPNGRTADLSRRHAVHVGSDGVITVVGGKLT
TYRRMAADAVDAAVAQADLDAGPCRTDRLPLVGAASRRVLAAVPAPRRLVARYGTQAPAVLALAERDPELLAPIADGVAV
TRAELVFAVRHEGALDADDLLDRRTRVGLVPADRAAALDAAREVLAACAVPAGSPVD

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=530, Percent_Identity=33.5849056603774, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI285002231, Length=530, Percent_Identity=33.5849056603774, Blast_Score=225, Evalue=7e-59,
Organism=Escherichia coli, GI2367226, Length=516, Percent_Identity=32.1705426356589, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1788574, Length=492, Percent_Identity=32.3170731707317, Blast_Score=118, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI17509253, Length=544, Percent_Identity=34.1911764705882, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI115534726, Length=531, Percent_Identity=30.8851224105461, Blast_Score=168, Evalue=5e-42,
Organism=Saccharomyces cerevisiae, GI6322036, Length=580, Percent_Identity=30.3448275862069, Blast_Score=182, Evalue=1e-46,
Organism=Drosophila melanogaster, GI161077125, Length=546, Percent_Identity=34.0659340659341, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24653942, Length=546, Percent_Identity=34.0659340659341, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24653944, Length=546, Percent_Identity=34.0659340659341, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI20130025, Length=546, Percent_Identity=34.0659340659341, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI19921278, Length=540, Percent_Identity=28.5185185185185, Blast_Score=153, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24586295, Length=407, Percent_Identity=30.7125307125307, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI45550977, Length=381, Percent_Identity=27.8215223097113, Blast_Score=113, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 55809; Mature: 55678

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS00977 FAD_G3PDH_1 ; PS00978 FAD_G3PDH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPFDRSSLTADRRARELGELAGGEAVDLLVVGGGVTGAGVALDAASRGLSVALVEAHD
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEHHHCCCCEEEEEEEHH
LAFGTSRWSSKLVHGGLRYLASGDIGLARESALEREILMRRTAPHLVHPLPIVLPLTEDV
HHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
PAGSAMLARAGMGLADLLRRGARTPGTVLPPPRRLSAVETLGMVPGLREAGLRGGLLHWD
CCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCEEEEC
GQLVDDARLVVTIARTAAAFGARVLTRVRVLSVESPGYAPGGAARRGGLPPEPVGVEVVD
CEEECCCEEEEEHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
TLTGTRCTLRARTVVNATGVWTPALAPEVRLRPSRGTHLVLPAAAFGGTPTALSVPIPGE
CCCCCEEEEEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEHHHCCCCCCEEEECCCCC
RNRYALVLPQGDGRVYVGLTDIPTDEVADVPTPDHQEITQLLNVVSSVLATPVDRADLLG
CCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
AFAGLRPLLDGPNGRTADLSRRHAVHVGSDGVITVVGGKLTTYRRMAADAVDAAVAQADL
HHHHCHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
DAGPCRTDRLPLVGAASRRVLAAVPAPRRLVARYGTQAPAVLALAERDPELLAPIADGVA
CCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCHH
VTRAELVFAVRHEGALDADDLLDRRTRVGLVPADRAAALDAAREVLAACAVPAGSPVD
HHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
STPFDRSSLTADRRARELGELAGGEAVDLLVVGGGVTGAGVALDAASRGLSVALVEAHD
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEHHHCCCCEEEEEEEHH
LAFGTSRWSSKLVHGGLRYLASGDIGLARESALEREILMRRTAPHLVHPLPIVLPLTEDV
HHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
PAGSAMLARAGMGLADLLRRGARTPGTVLPPPRRLSAVETLGMVPGLREAGLRGGLLHWD
CCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCEEEEC
GQLVDDARLVVTIARTAAAFGARVLTRVRVLSVESPGYAPGGAARRGGLPPEPVGVEVVD
CEEECCCEEEEEHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
TLTGTRCTLRARTVVNATGVWTPALAPEVRLRPSRGTHLVLPAAAFGGTPTALSVPIPGE
CCCCCEEEEEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEHHHCCCCCCEEEECCCCC
RNRYALVLPQGDGRVYVGLTDIPTDEVADVPTPDHQEITQLLNVVSSVLATPVDRADLLG
CCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
AFAGLRPLLDGPNGRTADLSRRHAVHVGSDGVITVVGGKLTTYRRMAADAVDAAVAQADL
HHHHCHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
DAGPCRTDRLPLVGAASRRVLAAVPAPRRLVARYGTQAPAVLALAERDPELLAPIADGVA
CCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCHH
VTRAELVFAVRHEGALDADDLLDRRTRVGLVPADRAAALDAAREVLAACAVPAGSPVD
HHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]