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The map label for this gene is glpD2 [H]

Identifier: 158317354

GI number: 158317354

Start: 6797977

End: 6799758

Strand: Direct

Name: glpD2 [H]

Synonym: Franean1_5604

Alternate gene names: 158317354

Gene position: 6797977-6799758 (Clockwise)

Preceding gene: 158317351

Following gene: 158317356

Centisome position: 75.68

GC content: 74.58

Gene sequence:

>1782_bases
ATGACCGGTACCGCCCGCCTCGACCCGGCCAGCCGGGCAGCCGCGCTGCGGCGCATGCGCGCCGAGCCGGTGGACGTCGT
CGTGATCGGCGGCGGCGTGACCGGCGCCGGGGTGGCGCTCGACGCGGCCACGCGGGGCCTGTCGGTCGCCCTGCTCGAGG
CCCGCGACCTCGCCGCCGGGACGTCCAGCCGGTCGAGCAAGCTGATCCACGGCGGCCTGCGCTATCTGGAGCAGCTCAAC
GGCGCCCTCGTCCGCGAGGCGCTGCGCGAGCGGTCGCTGCTGCTGGAGACGATCGCCCCGCACCTCGTCCGGGCGATCCC
GTTCCTGCTCCCACTGACCCATCACGGCTGGGAACGCGCCTACATCGGCAGCGGCGTGCTGCTCTACGACACTCTCGGGC
AGGGCATCGGGCGCATCGCCCCCCGCACGGGCGGAGACGGCGGTGCCCCCCGCAACGGGGGTGTCCCGCTGCACCGGCAC
CTGACCCGCAAGGCGGCGCTGCGTGAGTTCCCATCGCTGCGCCCCGACGCGCTCGTCGGCGCCATCCAGTACTGGGACGG
GCAGGTCGACGACGCCCGGCACACCATGTTCGTCGCCCGCACGGCCGCCCGCTACGGGGCCCTGATCGCCACGAGCGCCC
AGGTCACCGGGCTGGTGCGGGAGGGCGACCGGGTCGCCGGGGTACGGGTACGCGACCTGGAGAACGGGGTCGACCTGGAG
GTCCGCGCCGCGCAGACGATCAACGCGGCCGGGGTGTGGACGGACGACATCCAGGCGATGGTCGGCGGGCGCGGGCGGCT
CTCGGTGCGCGCGTCGAAGGGTGTCCACATCGTGGTCCCGCGCGACCGCATCCACGGCTCGACCGGGTTGATCCTGCGCA
CCGAGAAAAGTGTCCTGTTCGTGATCCCCTGGGGCAGCCACTGGATCGTCGGGACGACCGACACCGAGTGGAACCTCGAC
CTCGCGCACCCGGCCGCCAGCAGCGCGGACATCTCCTACCTGCTCGACACCGTCAACCGGGTGCTGCGCACACCGCTGAC
CACCGAGGACATCACCGGCGTCTACGCCGGCCTGCGGCCGCTGCTGGCCGGCGAGTCGGAGGACACCTCGCAGCTGTCCC
GGGAGCACGCCGTGGTCAGCCCGGTCGCCGGGCTCACGATGGTCGCCGGCGGCAAGTACACGACGTACCGGGTGATGGCG
GCGGACGCCGTCGACGCGGCGACGGTCGGGATGAGCCGCGCGGTGCCGCCGTCGTGCACTGATCGTGTCCCGCTGCTCGG
CGCGGACGGCTACCCGGCGCTGTGGAACGCCCGGGAGGGCCTGGCTCGCGCCTCCGGGCTGCACGTCGCCTGGGTGGAGC
ACCTGCTGCACCGATACGGCACCCTCACCGAGGAGGTCCTGGCCCTCGTCGCGGACCGGGCCGAGCTGGGCCGTCCGCTG
CGCGGCGCGCCGAAGTACCTGGCGGTCGAGGCTGTGTACGCGGCGTCACACGAGGGCGCGCTGCACCTCGAGGACGTCCT
GACCCGGCGGACCCGCATCTCGATCGAGACGGCCGACCGCGGGCTGGAGGCCGCCCCCCAGGTCGCCGAGCTGATCGCCC
CCGTCCTCGGTTGGAGCCCCGCCACCGTCGGGCGCGAGATCGATCACTACCGGGCCCGGGTCACCGCCGAGCTCGAGTCA
CAGCGGCAGGCCGACGACCACACCGCCGACGCGGCCAGGCTGGGCGCTCCCGACGTCCGCCCGGTGGTGCGGGAGGGGCG
CGGCGCCGCGGCCCCGGCCTGA

Upstream 100 bases:

>100_bases
CGATGGGATGGAGCCGTCCGCACCGCGGGACGGCAACGCTCGGGACCGCCCGGGACAGGACGCCCAGGACAGGACACGGT
CGAAGGGGGATCCACACACC

Downstream 100 bases:

>100_bases
GCCCGACGTCCCGGGGAGGTTTTGCGGTGGGCACGCCGCCCCCGACGTTCCAGGACGGATGTTCCGCCCCGCGTCGGCAC
CCGGGCTGGTCAAAGGCCGT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 592

Protein sequence:

>593_residues
MTGTARLDPASRAAALRRMRAEPVDVVVIGGGVTGAGVALDAATRGLSVALLEARDLAAGTSSRSSKLIHGGLRYLEQLN
GALVREALRERSLLLETIAPHLVRAIPFLLPLTHHGWERAYIGSGVLLYDTLGQGIGRIAPRTGGDGGAPRNGGVPLHRH
LTRKAALREFPSLRPDALVGAIQYWDGQVDDARHTMFVARTAARYGALIATSAQVTGLVREGDRVAGVRVRDLENGVDLE
VRAAQTINAAGVWTDDIQAMVGGRGRLSVRASKGVHIVVPRDRIHGSTGLILRTEKSVLFVIPWGSHWIVGTTDTEWNLD
LAHPAASSADISYLLDTVNRVLRTPLTTEDITGVYAGLRPLLAGESEDTSQLSREHAVVSPVAGLTMVAGGKYTTYRVMA
ADAVDAATVGMSRAVPPSCTDRVPLLGADGYPALWNAREGLARASGLHVAWVEHLLHRYGTLTEEVLALVADRAELGRPL
RGAPKYLAVEAVYAASHEGALHLEDVLTRRTRISIETADRGLEAAPQVAELIAPVLGWSPATVGREIDHYRARVTAELES
QRQADDHTADAARLGAPDVRPVVREGRGAAAPA

Sequences:

>Translated_593_residues
MTGTARLDPASRAAALRRMRAEPVDVVVIGGGVTGAGVALDAATRGLSVALLEARDLAAGTSSRSSKLIHGGLRYLEQLN
GALVREALRERSLLLETIAPHLVRAIPFLLPLTHHGWERAYIGSGVLLYDTLGQGIGRIAPRTGGDGGAPRNGGVPLHRH
LTRKAALREFPSLRPDALVGAIQYWDGQVDDARHTMFVARTAARYGALIATSAQVTGLVREGDRVAGVRVRDLENGVDLE
VRAAQTINAAGVWTDDIQAMVGGRGRLSVRASKGVHIVVPRDRIHGSTGLILRTEKSVLFVIPWGSHWIVGTTDTEWNLD
LAHPAASSADISYLLDTVNRVLRTPLTTEDITGVYAGLRPLLAGESEDTSQLSREHAVVSPVAGLTMVAGGKYTTYRVMA
ADAVDAATVGMSRAVPPSCTDRVPLLGADGYPALWNAREGLARASGLHVAWVEHLLHRYGTLTEEVLALVADRAELGRPL
RGAPKYLAVEAVYAASHEGALHLEDVLTRRTRISIETADRGLEAAPQVAELIAPVLGWSPATVGREIDHYRARVTAELES
QRQADDHTADAARLGAPDVRPVVREGRGAAAPA
>Mature_592_residues
TGTARLDPASRAAALRRMRAEPVDVVVIGGGVTGAGVALDAATRGLSVALLEARDLAAGTSSRSSKLIHGGLRYLEQLNG
ALVREALRERSLLLETIAPHLVRAIPFLLPLTHHGWERAYIGSGVLLYDTLGQGIGRIAPRTGGDGGAPRNGGVPLHRHL
TRKAALREFPSLRPDALVGAIQYWDGQVDDARHTMFVARTAARYGALIATSAQVTGLVREGDRVAGVRVRDLENGVDLEV
RAAQTINAAGVWTDDIQAMVGGRGRLSVRASKGVHIVVPRDRIHGSTGLILRTEKSVLFVIPWGSHWIVGTTDTEWNLDL
AHPAASSADISYLLDTVNRVLRTPLTTEDITGVYAGLRPLLAGESEDTSQLSREHAVVSPVAGLTMVAGGKYTTYRVMAA
DAVDAATVGMSRAVPPSCTDRVPLLGADGYPALWNAREGLARASGLHVAWVEHLLHRYGTLTEEVLALVADRAELGRPLR
GAPKYLAVEAVYAASHEGALHLEDVLTRRTRISIETADRGLEAAPQVAELIAPVLGWSPATVGREIDHYRARVTAELESQ
RQADDHTADAARLGAPDVRPVVREGRGAAAPA

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=585, Percent_Identity=35.3846153846154, Blast_Score=291, Evalue=2e-78,
Organism=Homo sapiens, GI285002231, Length=585, Percent_Identity=35.3846153846154, Blast_Score=291, Evalue=2e-78,
Organism=Escherichia coli, GI2367226, Length=486, Percent_Identity=32.5102880658436, Blast_Score=181, Evalue=2e-46,
Organism=Escherichia coli, GI1788574, Length=390, Percent_Identity=27.9487179487179, Blast_Score=106, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17509253, Length=562, Percent_Identity=34.5195729537367, Blast_Score=234, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI115534726, Length=552, Percent_Identity=31.8840579710145, Blast_Score=228, Evalue=9e-60,
Organism=Saccharomyces cerevisiae, GI6322036, Length=601, Percent_Identity=30.4492512479201, Blast_Score=205, Evalue=2e-53,
Organism=Drosophila melanogaster, GI161077125, Length=561, Percent_Identity=34.4028520499109, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24653942, Length=561, Percent_Identity=34.4028520499109, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24653944, Length=561, Percent_Identity=34.4028520499109, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI20130025, Length=561, Percent_Identity=34.4028520499109, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24586295, Length=568, Percent_Identity=31.6901408450704, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI19921278, Length=556, Percent_Identity=28.5971223021583, Blast_Score=162, Evalue=7e-40,
Organism=Drosophila melanogaster, GI45550977, Length=391, Percent_Identity=26.5984654731458, Blast_Score=112, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 63149; Mature: 63017

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS00977 FAD_G3PDH_1 ; PS00978 FAD_G3PDH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTARLDPASRAAALRRMRAEPVDVVVIGGGVTGAGVALDAATRGLSVALLEARDLAAG
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHCCCEEEEEEHHHHHCC
TSSRSSKLIHGGLRYLEQLNGALVREALRERSLLLETIAPHLVRAIPFLLPLTHHGWERA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
YIGSGVLLYDTLGQGIGRIAPRTGGDGGAPRNGGVPLHRHLTRKAALREFPSLRPDALVG
EECCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
AIQYWDGQVDDARHTMFVARTAARYGALIATSAQVTGLVREGDRVAGVRVRDLENGVDLE
HHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCEEECEEEEECCCCCCEE
VRAAQTINAAGVWTDDIQAMVGGRGRLSVRASKGVHIVVPRDRIHGSTGLILRTEKSVLF
EEECCEECCCCCCHHHHHHHHCCCCEEEEEECCCEEEEECHHHCCCCCCEEEEECCCEEE
VIPWGSHWIVGTTDTEWNLDLAHPAASSADISYLLDTVNRVLRTPLTTEDITGVYAGLRP
EEECCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LLAGESEDTSQLSREHAVVSPVAGLTMVAGGKYTTYRVMAADAVDAATVGMSRAVPPSCT
HHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCHHHHHHCCCCCCCCCCC
DRVPLLGADGYPALWNAREGLARASGLHVAWVEHLLHRYGTLTEEVLALVADRAELGRPL
CCCCEECCCCCCCHHCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
RGAPKYLAVEAVYAASHEGALHLEDVLTRRTRISIETADRGLEAAPQVAELIAPVLGWSP
CCCCCEEEEEEEEECCCCCCEEHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCC
ATVGREIDHYRARVTAELESQRQADDHTADAARLGAPDVRPVVREGRGAAAPA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure 
TGTARLDPASRAAALRRMRAEPVDVVVIGGGVTGAGVALDAATRGLSVALLEARDLAAG
CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHCCCEEEEEEHHHHHCC
TSSRSSKLIHGGLRYLEQLNGALVREALRERSLLLETIAPHLVRAIPFLLPLTHHGWERA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
YIGSGVLLYDTLGQGIGRIAPRTGGDGGAPRNGGVPLHRHLTRKAALREFPSLRPDALVG
EECCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
AIQYWDGQVDDARHTMFVARTAARYGALIATSAQVTGLVREGDRVAGVRVRDLENGVDLE
HHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCEEECEEEEECCCCCCEE
VRAAQTINAAGVWTDDIQAMVGGRGRLSVRASKGVHIVVPRDRIHGSTGLILRTEKSVLF
EEECCEECCCCCCHHHHHHHHCCCCEEEEEECCCEEEEECHHHCCCCCCEEEEECCCEEE
VIPWGSHWIVGTTDTEWNLDLAHPAASSADISYLLDTVNRVLRTPLTTEDITGVYAGLRP
EEECCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LLAGESEDTSQLSREHAVVSPVAGLTMVAGGKYTTYRVMAADAVDAATVGMSRAVPPSCT
HHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCHHHHHHCCCCCCCCCCC
DRVPLLGADGYPALWNAREGLARASGLHVAWVEHLLHRYGTLTEEVLALVADRAELGRPL
CCCCEECCCCCCCHHCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
RGAPKYLAVEAVYAASHEGALHLEDVLTRRTRISIETADRGLEAAPQVAELIAPVLGWSP
CCCCCEEEEEEEEECCCCCCEEHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCC
ATVGREIDHYRARVTAELESQRQADDHTADAARLGAPDVRPVVREGRGAAAPA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]