| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317341
Identifier: 158317341
GI number: 158317341
Start: 6777871
End: 6778785
Strand: Direct
Name: 158317341
Synonym: Franean1_5591
Alternate gene names: NA
Gene position: 6777871-6778785 (Clockwise)
Preceding gene: 158317339
Following gene: 158317342
Centisome position: 75.46
GC content: 69.4
Gene sequence:
>915_bases GTGGCCGCTCCGGCCGCGGATGCCACCTTCGCGACGGACCAGGTCGCGGCCGATCTGGCCGCGACCTCAAGCACGGTCGG GTCGAAGGTCGTCTCCTTCGTCCAGACCAAGGGCACCTCCTACACCTTCGGCGTCTACGCCGATCCCGACCTGGGCAAGG TCATCGTCGAGACCGACGCGCCCGCGCGGGACGTGGCCGCGCGGGACGTGGCCGCGCGGGACGTGGCCGCGCGGGACGTG GCCGCACTGCTCGGCAAGGACGCGAGCCAGGTCGTGGTCCGCAAGGGGAAGGTCACCGACCTGTTCAGCCGGCGCGACGA CATCCCCGCATTCTGGGGTGGCGCCGGGATCAGGTCCGGTGGGGCCATCTGTTCCTCGGGCTACACCGTCGCCGACTCGG CGAACACCCGCTACCAGGTGACCGCCGGGCACTGCGCACCCGACGGCGCGACCGAGGTCACGGAGCTGGGCAACCGCACC TTCGGTGTCGTCAGCGGCAACGGTCTGCCCAGCAAGGACATGGTGCTGCTCGGCGGTCAGCCGTACGGATCGTTCATCTA CGGCGGCGGCGTCAACAGCAGCACCGGTTACCACGTCGCCGGCGCCGGCAATCCCGTCGTCGGTTTCACCAACTACTTCC ACAGCGGCCGCACGACGGGTGAGAACTGCGGGCACACCATGCAGAGCGTCACGGCCACCGTCTGCACCAGCAGCGGCTGC AAGTCGCCCGTGGCCGCCTTCACCGGCGGTGTCCTCCCACAGGGCGGCGACTCCGGCTCGCCGTTCTACGCCAACGCCAC CAGCGGCTCCGACAAGCACATCCGCGGGCACGTCATCGCGGGTAACGGAACCACCTCGTACGCCGAGCTGTGGAACAACG TCGTGGCACGCTACGGCGTACATATCGTGACATAG
Upstream 100 bases:
>100_bases TGGCGATGGCCGGATTCACCGTGATCGCTAGCACGATTCCGGTGTACGCCGCGAACTCGTCAGGCGACAGCAAGGCGACC CCATCGCGGTAGACAACGCG
Downstream 100 bases:
>100_bases TTCTCGCACGCCTGTTCACGAACCGGTCGGCCCCGAGCGCATTCCTCTCGCCCGGGTCCGGCCGGTCTCTCGTTTCAAGG CCCACCACCTACCGGAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MAAPAADATFATDQVAADLAATSSTVGSKVVSFVQTKGTSYTFGVYADPDLGKVIVETDAPARDVAARDVAARDVAARDV AALLGKDASQVVVRKGKVTDLFSRRDDIPAFWGGAGIRSGGAICSSGYTVADSANTRYQVTAGHCAPDGATEVTELGNRT FGVVSGNGLPSKDMVLLGGQPYGSFIYGGGVNSSTGYHVAGAGNPVVGFTNYFHSGRTTGENCGHTMQSVTATVCTSSGC KSPVAAFTGGVLPQGGDSGSPFYANATSGSDKHIRGHVIAGNGTTSYAELWNNVVARYGVHIVT
Sequences:
>Translated_304_residues MAAPAADATFATDQVAADLAATSSTVGSKVVSFVQTKGTSYTFGVYADPDLGKVIVETDAPARDVAARDVAARDVAARDV AALLGKDASQVVVRKGKVTDLFSRRDDIPAFWGGAGIRSGGAICSSGYTVADSANTRYQVTAGHCAPDGATEVTELGNRT FGVVSGNGLPSKDMVLLGGQPYGSFIYGGGVNSSTGYHVAGAGNPVVGFTNYFHSGRTTGENCGHTMQSVTATVCTSSGC KSPVAAFTGGVLPQGGDSGSPFYANATSGSDKHIRGHVIAGNGTTSYAELWNNVVARYGVHIVT >Mature_303_residues AAPAADATFATDQVAADLAATSSTVGSKVVSFVQTKGTSYTFGVYADPDLGKVIVETDAPARDVAARDVAARDVAARDVA ALLGKDASQVVVRKGKVTDLFSRRDDIPAFWGGAGIRSGGAICSSGYTVADSANTRYQVTAGHCAPDGATEVTELGNRTF GVVSGNGLPSKDMVLLGGQPYGSFIYGGGVNSSTGYHVAGAGNPVVGFTNYFHSGRTTGENCGHTMQSVTATVCTSSGCK SPVAAFTGGVLPQGGDSGSPFYANATSGSDKHIRGHVIAGNGTTSYAELWNNVVARYGVHIVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30864; Mature: 30733
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPAADATFATDQVAADLAATSSTVGSKVVSFVQTKGTSYTFGVYADPDLGKVIVETDA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCC PARDVAARDVAARDVAARDVAALLGKDASQVVVRKGKVTDLFSRRDDIPAFWGGAGIRSG CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCHHHHHHCCCCCCEEECCCCCCCC GAICSSGYTVADSANTRYQVTAGHCAPDGATEVTELGNRTFGVVSGNGLPSKDMVLLGGQ CCEECCCEEEECCCCCEEEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCCCCEEEECCC PYGSFIYGGGVNSSTGYHVAGAGNPVVGFTNYFHSGRTTGENCGHTMQSVTATVCTSSGC CCCCEEECCCCCCCCCEEEECCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC KSPVAAFTGGVLPQGGDSGSPFYANATSGSDKHIRGHVIAGNGTTSYAELWNNVVARYGV CCCHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCC HIVT EEEC >Mature Secondary Structure AAPAADATFATDQVAADLAATSSTVGSKVVSFVQTKGTSYTFGVYADPDLGKVIVETDA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCC PARDVAARDVAARDVAARDVAALLGKDASQVVVRKGKVTDLFSRRDDIPAFWGGAGIRSG CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCHHHHHHCCCCCCEEECCCCCCCC GAICSSGYTVADSANTRYQVTAGHCAPDGATEVTELGNRTFGVVSGNGLPSKDMVLLGGQ CCEECCCEEEECCCCCEEEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCCCCEEEECCC PYGSFIYGGGVNSSTGYHVAGAGNPVVGFTNYFHSGRTTGENCGHTMQSVTATVCTSSGC CCCCEEECCCCCCCCCEEEECCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC KSPVAAFTGGVLPQGGDSGSPFYANATSGSDKHIRGHVIAGNGTTSYAELWNNVVARYGV CCCHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCC HIVT EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA