| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317339
Identifier: 158317339
GI number: 158317339
Start: 6775945
End: 6776322
Strand: Direct
Name: 158317339
Synonym: Franean1_5589
Alternate gene names: NA
Gene position: 6775945-6776322 (Clockwise)
Preceding gene: 158317337
Following gene: 158317341
Centisome position: 75.44
GC content: 68.52
Gene sequence:
>378_bases ATGGGACGGTTCAGGCCGATTTTCCACCGCGGTGGCCTCGGCTTTCTGCTCGCGGTTCTGGCGGCGACCGGGGCCGCGTG CCAGCCCGGTCCGGTGCGCGGCCCTGGCGGTGGGGCCGATTCCCCTCCCGCGGCCGACACAGATGCCACACCACGCCCGG ACCCGGCAGACCTACGCCGTGTCTCGGCGGAAATAGAACGCCGGGTCACGGCCTATGCCCAGGCCCATGACACCTCGTAC TCCTTCGGGGTCTACATCGATTCCGGGATAGGACGGGTCATCCTGGAGACCGACGCCCCCGCGAACGTGACGGACCAACT CGTCGGCGCCGACGCCGATCTCGTCCAGATCCGGCGGGAAAAGGTCGAGGACTACTAG
Upstream 100 bases:
>100_bases CGGTGGGTCCCTACGCGCCCGCCGCTGCGCCGAAGCGGGCCGCCGGGCGGCGAAAATCACCGTGCCGACATCACCCCGGC GACCTGCAGGAGGACATTCC
Downstream 100 bases:
>100_bases CCGCGAACATCACCGCACAACGCGCTGTTTATGCGGCTTGCCTTGTCAAGAAGGAGACAGGCGTCGAAACCTCGACGCTC CGAACCACCTCGGTACTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MGRFRPIFHRGGLGFLLAVLAATGAACQPGPVRGPGGGADSPPAADTDATPRPDPADLRRVSAEIERRVTAYAQAHDTSY SFGVYIDSGIGRVILETDAPANVTDQLVGADADLVQIRREKVEDY
Sequences:
>Translated_125_residues MGRFRPIFHRGGLGFLLAVLAATGAACQPGPVRGPGGGADSPPAADTDATPRPDPADLRRVSAEIERRVTAYAQAHDTSY SFGVYIDSGIGRVILETDAPANVTDQLVGADADLVQIRREKVEDY >Mature_124_residues GRFRPIFHRGGLGFLLAVLAATGAACQPGPVRGPGGGADSPPAADTDATPRPDPADLRRVSAEIERRVTAYAQAHDTSYS FGVYIDSGIGRVILETDAPANVTDQLVGADADLVQIRREKVEDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13192; Mature: 13061
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFRPIFHRGGLGFLLAVLAATGAACQPGPVRGPGGGADSPPAADTDATPRPDPADLRR CCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH VSAEIERRVTAYAQAHDTSYSFGVYIDSGIGRVILETDAPANVTDQLVGADADLVQIRRE HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHH KVEDY HHCCC >Mature Secondary Structure GRFRPIFHRGGLGFLLAVLAATGAACQPGPVRGPGGGADSPPAADTDATPRPDPADLRR CCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH VSAEIERRVTAYAQAHDTSYSFGVYIDSGIGRVILETDAPANVTDQLVGADADLVQIRRE HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHH KVEDY HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA