| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317326
Identifier: 158317326
GI number: 158317326
Start: 6756919
End: 6757749
Strand: Direct
Name: 158317326
Synonym: Franean1_5576
Alternate gene names: NA
Gene position: 6756919-6757749 (Clockwise)
Preceding gene: 158317323
Following gene: 158317332
Centisome position: 75.23
GC content: 75.21
Gene sequence:
>831_bases GTGGACGAACGTGAGGTCGTCGCCCGGCGATACGGGGAACACCTGACGGACCAGGACCTGCTGGCGCTCACCGGCGGCCG GGCGGATCAGGTCGGGGCTCTGCGCCGCGAGCCCACCCTCATCCTCGACCTGCTTGACCGGCCCGCGGTGGCGGACGGGC TGCTCCTCGCCGCGGGTACGGCCGGCCGCGACGAACCGGACAGGTTCACCTTCATCTCGCCGTTCCTGGTCTTCGCCGCC GCGGTACACCGCACGGCGCGTGGCCTCGTCGGTTCCACCTATGTCGCCGAGCGCGCCGGGCCGCGCTCCCGGGTGCCCGT CTTCGACGCGCCCGAGCTGGCGGCGTTCGCGTCCGTGCCCGCCCATCAGCTCTACCTCGCCGAGCTGCTGGCCTCCTACT CCCGCCTCGCCGGCGGCGAGGTGTGGCGGCGCACCGACCGGGGCTGGCGGCGCCAGCGCTGGGACGAGCTCGACCTCCCC CGGCTGGCGGCGTTGCTCGACGCCGTCCCCGCCGCGCAGCGCCCGGCGGTCTGGCGGCGGCTCGGCGACGGCGCCGTCTT CCTGGCCGGCGTCTTCCCCGATCATGCGGAGCGGACGCTCGGCCTGCTCGCGGTGAGCCGGCTGCGCGAGGCCACCGGGC TGCGGCTGACACGCGACGACGTCCCACGGATGTTGGAGTCCGTCGCGCGGCGGGCGTACGAGCAGGTGGGGCCGGGTGTT CCGGTGGGTGCGGCGAAGGCGCCCGGCTCGACCCGCCGGCTGCTGACCGTCATCGCGGACAGGTATCTCTTCCCCTTTGC CGCGGACTGGCTCCCCGGCCCCGCTCACTGA
Upstream 100 bases:
>100_bases GTGATGTCGGCAGGTCCGGTTCCACACCACCTGTCTACCGAGCGGAGCGGACATGCGACGGACGTGAACGCGACAGGCCG CCGGGAGAGACAATGAGGCG
Downstream 100 bases:
>100_bases CCGCCCGGGGCCAGGCCGCCCGGGGTCAGGCCGCCGTCCAGGGATCAGACGGTGCCGGCGGGGTGGCTCGAGCCGCTGGG ACCGAAGCGCTCGGTGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MDEREVVARRYGEHLTDQDLLALTGGRADQVGALRREPTLILDLLDRPAVADGLLLAAGTAGRDEPDRFTFISPFLVFAA AVHRTARGLVGSTYVAERAGPRSRVPVFDAPELAAFASVPAHQLYLAELLASYSRLAGGEVWRRTDRGWRRQRWDELDLP RLAALLDAVPAAQRPAVWRRLGDGAVFLAGVFPDHAERTLGLLAVSRLREATGLRLTRDDVPRMLESVARRAYEQVGPGV PVGAAKAPGSTRRLLTVIADRYLFPFAADWLPGPAH
Sequences:
>Translated_276_residues MDEREVVARRYGEHLTDQDLLALTGGRADQVGALRREPTLILDLLDRPAVADGLLLAAGTAGRDEPDRFTFISPFLVFAA AVHRTARGLVGSTYVAERAGPRSRVPVFDAPELAAFASVPAHQLYLAELLASYSRLAGGEVWRRTDRGWRRQRWDELDLP RLAALLDAVPAAQRPAVWRRLGDGAVFLAGVFPDHAERTLGLLAVSRLREATGLRLTRDDVPRMLESVARRAYEQVGPGV PVGAAKAPGSTRRLLTVIADRYLFPFAADWLPGPAH >Mature_276_residues MDEREVVARRYGEHLTDQDLLALTGGRADQVGALRREPTLILDLLDRPAVADGLLLAAGTAGRDEPDRFTFISPFLVFAA AVHRTARGLVGSTYVAERAGPRSRVPVFDAPELAAFASVPAHQLYLAELLASYSRLAGGEVWRRTDRGWRRQRWDELDLP RLAALLDAVPAAQRPAVWRRLGDGAVFLAGVFPDHAERTLGLLAVSRLREATGLRLTRDDVPRMLESVARRAYEQVGPGV PVGAAKAPGSTRRLLTVIADRYLFPFAADWLPGPAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30209; Mature: 30209
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEREVVARRYGEHLTDQDLLALTGGRADQVGALRREPTLILDLLDRPAVADGLLLAAGT CCHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHCCCHHHHHHHCCCCHHCCCEEECCC AGRDEPDRFTFISPFLVFAAAVHRTARGLVGSTYVAERAGPRSRVPVFDAPELAAFASVP CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC AHQLYLAELLASYSRLAGGEVWRRTDRGWRRQRWDELDLPRLAALLDAVPAAQRPAVWRR HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHH LGDGAVFLAGVFPDHAERTLGLLAVSRLREATGLRLTRDDVPRMLESVARRAYEQVGPGV HCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC PVGAAKAPGSTRRLLTVIADRYLFPFAADWLPGPAH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDEREVVARRYGEHLTDQDLLALTGGRADQVGALRREPTLILDLLDRPAVADGLLLAAGT CCHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHCCCHHHHHHHCCCCHHCCCEEECCC AGRDEPDRFTFISPFLVFAAAVHRTARGLVGSTYVAERAGPRSRVPVFDAPELAAFASVP CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC AHQLYLAELLASYSRLAGGEVWRRTDRGWRRQRWDELDLPRLAALLDAVPAAQRPAVWRR HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHH LGDGAVFLAGVFPDHAERTLGLLAVSRLREATGLRLTRDDVPRMLESVARRAYEQVGPGV HCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC PVGAAKAPGSTRRLLTVIADRYLFPFAADWLPGPAH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA