Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317324

Identifier: 158317324

GI number: 158317324

Start: 6754895

End: 6756040

Strand: Reverse

Name: 158317324

Synonym: Franean1_5574

Alternate gene names: NA

Gene position: 6756040-6754895 (Counterclockwise)

Preceding gene: 158317325

Following gene: 158317321

Centisome position: 75.22

GC content: 73.65

Gene sequence:

>1146_bases
ATGAGCTGCGACGGCCGCCGTCGGCACGGACGGTCCCGGGGCGGGCGGAACAACGAGGAGTGCGACATGTCCGTCCTGCA
GTGCGGGTCCGGCGAGGTACCGGGGGAGCACTACCTGCCCTCGTCGCCCAAGACGGTCACCTGGGGCCGGCTGCCCAGCG
CGGCGACCGACCCGGTGCTCGAAGTGGCGGCGGGCGCCACCGTCACCATCGACACCGTCTCGCACGAGGGCCTCATGGAG
GACCAGGGCCGCGACCCGGTCGCCTTCTGGGCGGAGCACGCCGTCGCGGCGGATTCGGTCCTCCTCGACGCGATCGACAT
CGCCCGGGACGTCTCCCACTACCGCGGGCTCGACGGCCCGCACGTGGTCACCGGTCCGGTGCGGGTCGACGGCGCGCGCC
CCGGCGACATCCTCAAGGTCGAGTTCCTCGAGCTGCGCCCGCGGGTGCCCTACGGGCTCGTCTCCAGCCGGCACGGCCGG
GGCGCGCTGCCCGGCGAGCTTCCCGTCGGCCCCGACGGCGTGCTCGCCGACCGTTACAGCCAGTTCTGCGAGGTGGACGT
CGCCGCCGGGCGGGCCGTGATGCGCTACGGCGAGGGCCGGCAGATCAGCTTCCCGGTCGCGCCGTTCATGGGTCTCACCG
GCCTCACCCCGGCCGGGGAGAAGGCCCTCAACACGACCCCGCCCGGGGCATTCGGCGGGAACCTCGACGTGCGCGACCTC
GTCGCCGGGTCGACGCTCTACCTGCCGGTCCAGATCCCGGGCGCGGGCTTCTACACCGGTGATCCGCATTTCGCCCAGGG
GCACGGCGAGGTGTCGCTGACCGCCCTGGAGGCCTCGCTGCGCACGACCGTCCGGCTCACCCCGCTTCCGGCCGCCGCGG
CGCTGCCCTTCGGCGCGGGTTCCGGCGGCCCCTTCGGCGAGACCCCGGAGCACTGGATCGCCATCGGCCTGCACAACGAC
CTCGACGAGGCCATGCGGCTGGCCGTCCGCGAGGCGCTGCGGGTGCTGCGCCAGGTCCGGGATGTCCCGGTGATGGTCGC
GTACAGCTACCTGTCGGCCGCCGCCGACTTCGTGGTCAGCCAGGTCGTCGACGACGTGAAGGGCGTGCACTGCCTGATCC
GCAAGCGCGACTTCCCGGCCTGGTAG

Upstream 100 bases:

>100_bases
CAGTCGGCCTGGCGCGATGCGCGCGCGTCGGTGGCCACAAGTCCCCCAAGGTGTGAGACAGCGCGCCCGGGTTGGGCGTG
ACCAGCTATTTCCTGGTGAG

Downstream 100 bases:

>100_bases
CCGCGGCGCGGTCGTAGCGGCTGAAATTCAGGTCGGCCCGGCGGGCCGACCGGCGGCATTTCAGACCCGGAGGCGGTCGG
CCAGCAGGCCGCGGTGGTGG

Product: acetamidase/formamidase

Products: NA

Alternate protein names: Formamidase; Acetamidase/Formamidase Family Protein; Amidase; Acetamidase; Acetamidase/Formamidase Protein; Transcriptional Regulator; Amidase-Related Protein; Acetamidase/Formamidase Family; AraC Family Transcriptional Regulator; Amidae; Twin-Arginine Translocation Pathway Signal; Formamidase/Acetamidase; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MSCDGRRRHGRSRGGRNNEECDMSVLQCGSGEVPGEHYLPSSPKTVTWGRLPSAATDPVLEVAAGATVTIDTVSHEGLME
DQGRDPVAFWAEHAVAADSVLLDAIDIARDVSHYRGLDGPHVVTGPVRVDGARPGDILKVEFLELRPRVPYGLVSSRHGR
GALPGELPVGPDGVLADRYSQFCEVDVAAGRAVMRYGEGRQISFPVAPFMGLTGLTPAGEKALNTTPPGAFGGNLDVRDL
VAGSTLYLPVQIPGAGFYTGDPHFAQGHGEVSLTALEASLRTTVRLTPLPAAAALPFGAGSGGPFGETPEHWIAIGLHND
LDEAMRLAVREALRVLRQVRDVPVMVAYSYLSAAADFVVSQVVDDVKGVHCLIRKRDFPAW

Sequences:

>Translated_381_residues
MSCDGRRRHGRSRGGRNNEECDMSVLQCGSGEVPGEHYLPSSPKTVTWGRLPSAATDPVLEVAAGATVTIDTVSHEGLME
DQGRDPVAFWAEHAVAADSVLLDAIDIARDVSHYRGLDGPHVVTGPVRVDGARPGDILKVEFLELRPRVPYGLVSSRHGR
GALPGELPVGPDGVLADRYSQFCEVDVAAGRAVMRYGEGRQISFPVAPFMGLTGLTPAGEKALNTTPPGAFGGNLDVRDL
VAGSTLYLPVQIPGAGFYTGDPHFAQGHGEVSLTALEASLRTTVRLTPLPAAAALPFGAGSGGPFGETPEHWIAIGLHND
LDEAMRLAVREALRVLRQVRDVPVMVAYSYLSAAADFVVSQVVDDVKGVHCLIRKRDFPAW
>Mature_380_residues
SCDGRRRHGRSRGGRNNEECDMSVLQCGSGEVPGEHYLPSSPKTVTWGRLPSAATDPVLEVAAGATVTIDTVSHEGLMED
QGRDPVAFWAEHAVAADSVLLDAIDIARDVSHYRGLDGPHVVTGPVRVDGARPGDILKVEFLELRPRVPYGLVSSRHGRG
ALPGELPVGPDGVLADRYSQFCEVDVAAGRAVMRYGEGRQISFPVAPFMGLTGLTPAGEKALNTTPPGAFGGNLDVRDLV
AGSTLYLPVQIPGAGFYTGDPHFAQGHGEVSLTALEASLRTTVRLTPLPAAAALPFGAGSGGPFGETPEHWIAIGLHNDL
DEAMRLAVREALRVLRQVRDVPVMVAYSYLSAAADFVVSQVVDDVKGVHCLIRKRDFPAW

Specific function: Unknown

COG id: COG2421

COG function: function code C; Predicted acetamidase/formamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40507; Mature: 40376

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCDGRRRHGRSRGGRNNEECDMSVLQCGSGEVPGEHYLPSSPKTVTWGRLPSAATDPVL
CCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHH
EVAAGATVTIDTVSHEGLMEDQGRDPVAFWAEHAVAADSVLLDAIDIARDVSHYRGLDGP
HHHCCCEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HVVTGPVRVDGARPGDILKVEFLELRPRVPYGLVSSRHGRGALPGELPVGPDGVLADRYS
EEEECCEEECCCCCCCEEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHH
QFCEVDVAAGRAVMRYGEGRQISFPVAPFMGLTGLTPAGEKALNTTPPGAFGGNLDVRDL
HHHHHHHHHCHHHHHCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
VAGSTLYLPVQIPGAGFYTGDPHFAQGHGEVSLTALEASLRTTVRLTPLPAAAALPFGAG
HCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHEEEEEECCCCHHHHCCCCCC
SGGPFGETPEHWIAIGLHNDLDEAMRLAVREALRVLRQVRDVPVMVAYSYLSAAADFVVS
CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QVVDDVKGVHCLIRKRDFPAW
HHHHHHHHHEEEEECCCCCCC
>Mature Secondary Structure 
SCDGRRRHGRSRGGRNNEECDMSVLQCGSGEVPGEHYLPSSPKTVTWGRLPSAATDPVL
CCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHH
EVAAGATVTIDTVSHEGLMEDQGRDPVAFWAEHAVAADSVLLDAIDIARDVSHYRGLDGP
HHHCCCEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HVVTGPVRVDGARPGDILKVEFLELRPRVPYGLVSSRHGRGALPGELPVGPDGVLADRYS
EEEECCEEECCCCCCCEEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHH
QFCEVDVAAGRAVMRYGEGRQISFPVAPFMGLTGLTPAGEKALNTTPPGAFGGNLDVRDL
HHHHHHHHHCHHHHHCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
VAGSTLYLPVQIPGAGFYTGDPHFAQGHGEVSLTALEASLRTTVRLTPLPAAAALPFGAG
HCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHEEEEEECCCCHHHHCCCCCC
SGGPFGETPEHWIAIGLHNDLDEAMRLAVREALRVLRQVRDVPVMVAYSYLSAAADFVVS
CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QVVDDVKGVHCLIRKRDFPAW
HHHHHHHHHEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA